Protein ID | Hirsu2|149 |
Gene name | |
Location | Contig_1023:7191..8898 |
Strand | + |
Gene length (bp) | 1707 |
Transcript length (bp) | 1521 |
Coding sequence length (bp) | 1521 |
Protein length (aa) | 507 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01266 | DAO | FAD dependent oxidoreductase | 7.2E-69 | 91 | 484 |
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.5E-04 | 93 | 130 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q10058|YAM3_SCHPO | Putative oxidoreductase C1F5.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F5.03c PE=3 SV=1 | 85 | 502 | 1.0E-60 |
sp|P38758|TDA3_YEAST | Putative oxidoreductase TDA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA3 PE=1 SV=2 | 223 | 504 | 5.0E-52 |
sp|P38758|TDA3_YEAST | Putative oxidoreductase TDA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA3 PE=1 SV=2 | 86 | 190 | 9.0E-20 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5025 | 0.2715 | 0.3456 | 0.0376 | 0.2691 | 0.4317 | 0.1193 | 0.0496 | 0.1373 | 0.1295 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 91 | 108 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 1700 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|149 MLNDAVAVRCRPNSLSLSSPASRPVLSLPAARSRSVPDKAASAARPRPARHSPRRTSAAEPPISVARSASASGLS RLGSGAKRAMDGRRNIVIVGGGIIGCTTAYYLTRHPSFNPALHTITLLEAAPTVAAGASGKAGGLLALWAYPACL VPLSYRLHAELAAEHDGARRWGYRRLTCGSFQATVSRERIGQLHSPGSDGGKAWEKLPKRDRAADNMLESGSLPE ALDWVDRDSVTGWEEMGSASTAATSQVHPLHFTTSIADLARQAGVEVRTNAKVTSVVTSKTGVEKVDYFDRRANE DKEIREATDVIITAGPWTGRLLPRSKVEGLRAHSVVYEADVSPFAVFTDIRLPPDFVPEHRAKRGQKRMHKGSVD PEIYARPFGEVYACGEPDTAVPLPDTADGVQLDEAQCDDIISYIATVSPVLGAAPIKAKQACYLPRHMRFGQESG PLLGRTTVAGLWVAAGHTCWGIQNGPATGKLMAEFIFDGAATSADVEKLDPRKFKV* |
Coding | >Hirsu2|149 ATGCTCAACGACGCCGTTGCCGTCCGCTGCCGCCCGAATAGCCTCAGCTTGTCGAGCCCAGCATCCCGGCCCGTC CTGAGTCTGCCCGCGGCCCGCTCCCGCTCCGTGCCCGACAAAGCCGCCTCCGCCGCTCGGCCCCGCCCGGCGCGC CACAGCCCTCGTCGCACGAGCGCTGCCGAACCGCCCATCTCCGTCGCCCGCTCGGCCTCGGCCTCGGGCTTGAGC CGCCTCGGCTCCGGAGCCAAGCGAGCCATGGACGGGAGGCGCAACATCGTCATTGTCGGCGGCGGCATCATCGGC TGCACGACGGCCTACTACCTGACCCGCCACCCCAGCTTCAACCCGGCCCTCCACACCATCACCCTGCTCGAGGCC GCGCCCACCGTCGCGGCCGGGGCGTCGGGCAAGGCCGGCGGCCTGCTCGCCCTGTGGGCCTATCCCGCCTGCCTC GTCCCGCTCTCCTATCGGCTGCACGCCGAGCTGGCGGCCGAGCACGACGGCGCGCGGCGGTGGGGGTACAGGAGG CTCACCTGCGGCAGCTTCCAGGCGACCGTCTCCCGCGAGAGGATCGGCCAGCTGCACAGTCCGGGGAGCGACGGG GGCAAGGCCTGGGAGAAGCTGCCCAAGCGCGACCGTGCCGCTGACAACATGCTGGAGTCCGGCTCCCTGCCGGAG GCGCTGGACTGGGTTGATCGGGACTCCGTCACGGGATGGGAGGAGATGGGCAGCGCCAGCACGGCCGCCACCTCG CAGGTCCATCCGCTGCACTTCACCACCTCCATCGCCGACCTCGCCCGCCAGGCAGGCGTCGAGGTGAGGACGAAT GCCAAGGTCACCAGCGTCGTCACGTCCAAGACGGGCGTCGAAAAGGTCGACTACTTCGACCGACGGGCCAACGAG GATAAGGAGATCCGCGAGGCGACCGACGTCATCATCACCGCCGGCCCGTGGACGGGGCGCCTTCTGCCGCGGTCC AAGGTCGAGGGCCTCCGGGCGCACAGTGTCGTGTACGAGGCCGACGTGAGCCCGTTCGCCGTCTTCACCGACATC CGGCTGCCGCCCGACTTCGTCCCGGAGCATCGCGCCAAGAGGGGCCAGAAGAGGATGCACAAGGGCTCCGTCGAT CCCGAGATCTACGCAAGGCCCTTTGGCGAGGTATACGCGTGCGGCGAGCCGGACACGGCCGTGCCCCTACCGGAC ACGGCAGACGGGGTGCAGCTTGACGAGGCCCAGTGCGACGACATCATCTCTTACATCGCCACCGTGAGTCCCGTC CTCGGCGCAGCACCCATCAAAGCCAAGCAGGCCTGCTACCTGCCGCGGCACATGCGCTTCGGCCAGGAGAGCGGC CCGCTGCTGGGCCGCACGACCGTCGCCGGGCTGTGGGTCGCGGCCGGCCACACCTGCTGGGGCATCCAAAATGGC CCGGCCACGGGCAAGCTCATGGCCGAGTTCATCTTTGACGGCGCGGCGACGAGTGCGGACGTGGAGAAGCTCGAC CCGAGGAAATTCAAGGTCTGA |
Transcript | >Hirsu2|149 ATGCTCAACGACGCCGTTGCCGTCCGCTGCCGCCCGAATAGCCTCAGCTTGTCGAGCCCAGCATCCCGGCCCGTC CTGAGTCTGCCCGCGGCCCGCTCCCGCTCCGTGCCCGACAAAGCCGCCTCCGCCGCTCGGCCCCGCCCGGCGCGC CACAGCCCTCGTCGCACGAGCGCTGCCGAACCGCCCATCTCCGTCGCCCGCTCGGCCTCGGCCTCGGGCTTGAGC CGCCTCGGCTCCGGAGCCAAGCGAGCCATGGACGGGAGGCGCAACATCGTCATTGTCGGCGGCGGCATCATCGGC TGCACGACGGCCTACTACCTGACCCGCCACCCCAGCTTCAACCCGGCCCTCCACACCATCACCCTGCTCGAGGCC GCGCCCACCGTCGCGGCCGGGGCGTCGGGCAAGGCCGGCGGCCTGCTCGCCCTGTGGGCCTATCCCGCCTGCCTC GTCCCGCTCTCCTATCGGCTGCACGCCGAGCTGGCGGCCGAGCACGACGGCGCGCGGCGGTGGGGGTACAGGAGG CTCACCTGCGGCAGCTTCCAGGCGACCGTCTCCCGCGAGAGGATCGGCCAGCTGCACAGTCCGGGGAGCGACGGG GGCAAGGCCTGGGAGAAGCTGCCCAAGCGCGACCGTGCCGCTGACAACATGCTGGAGTCCGGCTCCCTGCCGGAG GCGCTGGACTGGGTTGATCGGGACTCCGTCACGGGATGGGAGGAGATGGGCAGCGCCAGCACGGCCGCCACCTCG CAGGTCCATCCGCTGCACTTCACCACCTCCATCGCCGACCTCGCCCGCCAGGCAGGCGTCGAGGTGAGGACGAAT GCCAAGGTCACCAGCGTCGTCACGTCCAAGACGGGCGTCGAAAAGGTCGACTACTTCGACCGACGGGCCAACGAG GATAAGGAGATCCGCGAGGCGACCGACGTCATCATCACCGCCGGCCCGTGGACGGGGCGCCTTCTGCCGCGGTCC AAGGTCGAGGGCCTCCGGGCGCACAGTGTCGTGTACGAGGCCGACGTGAGCCCGTTCGCCGTCTTCACCGACATC CGGCTGCCGCCCGACTTCGTCCCGGAGCATCGCGCCAAGAGGGGCCAGAAGAGGATGCACAAGGGCTCCGTCGAT CCCGAGATCTACGCAAGGCCCTTTGGCGAGGTATACGCGTGCGGCGAGCCGGACACGGCCGTGCCCCTACCGGAC ACGGCAGACGGGGTGCAGCTTGACGAGGCCCAGTGCGACGACATCATCTCTTACATCGCCACCGTGAGTCCCGTC CTCGGCGCAGCACCCATCAAAGCCAAGCAGGCCTGCTACCTGCCGCGGCACATGCGCTTCGGCCAGGAGAGCGGC CCGCTGCTGGGCCGCACGACCGTCGCCGGGCTGTGGGTCGCGGCCGGCCACACCTGCTGGGGCATCCAAAATGGC CCGGCCACGGGCAAGCTCATGGCCGAGTTCATCTTTGACGGCGCGGCGACGAGTGCGGACGTGGAGAAGCTCGAC CCGAGGAAATTCAAGGTCTGA |
Gene | >Hirsu2|149 ATGCTCAACGACGCCGTTGCCGTCCGCTGCCGCCCGAATAGCCTCAGCTTGTCGAGCCCAGCATCCCGGCCCGTC CTGAGTCTGCCCGCGGCCCGCTCCCGCTCCGTGCCCGACAAAGCCGCCTCCGCCGCTCGGCCCCGCCCGGCGCGC CACAGCCCTCGTCGCACGAGCGCTGCCGAACCGCCCATCTCCGTCGCCCGCTCGGCCTCGGCCTCGGGCTTGAGC CGCCTCGGCTCCGGAGCCAAGCGAGCCATGGACGGGAGGCGCAACATCGTCATTGTCGGTAAGGAGGCCCAGCAG CACGTGCCCCGGTCGCAATCAACCCTCTGGCTCGGCTGTTGTGCCCTCTTCCTCTCGCCTCGTCCCTGCGTCCCG GCCGCGGCGTGAAGCCCGACACTCAAACCTTGCGCAGGCGGCGGCATCATCGGCTGCACGACGGCCTACTACCTG ACCCGCCACCCCAGCTTCAACCCGGCCCTCCACACCATCACCCTGCTCGAGGCCGCGCCCACCGTCGCGGCCGGG GCGTCGGGCAAGGCCGGCGGCCTGCTCGCCCTGTGGGCCTATCCCGCCTGCCTCGTCCCGCTCTCCTATCGGCTG CACGCCGAGCTGGCGGCCGAGCACGACGGCGCGCGGCGGTGGGGGTACAGGAGGCTCACCTGCGGCAGCTTCCAG GCGACCGTCTCCCGCGAGAGGATCGGCCAGCTGCACAGTCCGGGGAGCGACGGGGGCAAGGCCTGGGAGAAGCTG CCCAAGCGCGACCGTGCCGCTGACAACATGCTGGAGTCCGGCTCCCTGCCGGAGGCGCTGGACTGGGTTGATCGG GACTCCGTCACGGGATGGGAGGAGATGGGCAGCGCCAGCACGGCCGCCACCTCGCAGGTCCATCCGCTGCACTTC ACCACCTCCATCGCCGACCTCGCCCGCCAGGCAGGCGTCGAGGTGAGGACGAATGCCAAGGTCACCAGCGTCGTC ACGTCCAAGACGGGCGTCGAAAAGGTCGACTACTTCGACCGACGGGCCAACGAGGATAAGGAGATCCGCGAGGCG ACCGACGTCATCATCACCGCCGGCCCGTGGACGGGGCGCCTTCTGCCGCGGTCCAAGGTCGAGGGCCTCCGGGCG CACAGTGTCGTGTACGAGGCCGACGTGAGCCCGTTCGCCGTCTTCACCGACATCCGGCTGCCGCCCGACTTCGTC CCGGAGCATCGCGCCAAGAGGGGCCAGAAGAGGATGCACAAGGGCTCCGTCGATCCCGAGATCTACGCAAGGCCC TTTGGCGAGGTATACGCGTGCGGTGGGTGAACGACAGCTCCCCCCCCTCCCGTCCAAGCGAGGATGCTCATCCGA ACAGGCGAGCCGGACACGGCCGTGCCCCTACCGGACACGGCAGACGGGGTGCAGCTTGACGAGGCCCAGTGCGAC GACATCATCTCTTACATCGCCACCGTGAGTCCCGTCCTCGGCGCAGCACCCATCAAAGCCAAGCAGGCCTGCTAC CTGCCGCGGCACATGCGCTTCGGCCAGGAGAGCGGCCCGCTGCTGGGCCGCACGACCGTCGCCGGGCTGTGGGTC GCGGCCGGCCACACCTGCTGGGGCATCCAAAATGGCCCGGCCACGGGCAAGCTCATGGCCGAGTTCATCTTTGAC GGCGCGGCGACGAGTGCGGACGTGGAGAAGCTCGACCCGAGGAAATTCAAGGTCTGA |