Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|148
Gene name
LocationContig_1023:5601..6282
Strand-
Gene length (bp)681
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00255 GSHPx Glutathione peroxidase 4.4E-42 7 117

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O59858|GPX1_SCHPO Glutathione peroxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpx1 PE=2 SV=1 5 161 2.0E-65
sp|P38143|GPX2_YEAST Glutathione peroxidase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPX2 PE=1 SV=1 4 167 2.0E-65
sp|P40581|GPX3_YEAST Peroxiredoxin HYR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HYR1 PE=1 SV=1 5 169 1.0E-64
sp|Q9CFV1|GPO_LACLA Glutathione peroxidase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=gpo PE=3 SV=2 6 161 2.0E-55
sp|O32770|GPO_LACLM Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1 6 152 1.0E-53
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O59858|GPX1_SCHPO Glutathione peroxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpx1 PE=2 SV=1 5 161 2.0E-65
sp|P38143|GPX2_YEAST Glutathione peroxidase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPX2 PE=1 SV=1 4 167 2.0E-65
sp|P40581|GPX3_YEAST Peroxiredoxin HYR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HYR1 PE=1 SV=1 5 169 1.0E-64
sp|Q9CFV1|GPO_LACLA Glutathione peroxidase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=gpo PE=3 SV=2 6 161 2.0E-55
sp|O32770|GPO_LACLM Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1 6 152 1.0E-53
sp|P74250|GPX1_SYNY3 Hydroperoxy fatty acid reductase gpx1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gpx1 PE=1 SV=1 5 161 2.0E-51
sp|Q8CSR9|BSAA_STAES Glutathione peroxidase homolog BsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1 6 161 3.0E-49
sp|Q9Z9N7|BSAA_BACHD Glutathione peroxidase homolog BsaA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=bsaA PE=3 SV=1 6 154 1.0E-48
sp|P36014|GPX1_YEAST Glutathione peroxidase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPX1 PE=3 SV=1 7 165 2.0E-48
sp|P52035|BSAA_BACSU Glutathione peroxidase homolog BsaA OS=Bacillus subtilis (strain 168) GN=bsaA PE=3 SV=1 6 167 2.0E-48
sp|P64291|BSAA_STAAW Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1 6 161 1.0E-46
sp|Q6G9Q8|BSAA_STAAS Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1 6 161 1.0E-46
sp|Q6GHD0|BSAA_STAAR Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1 6 161 1.0E-46
sp|P99097|BSAA_STAAN Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1 6 161 1.0E-46
sp|P64290|BSAA_STAAM Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=bsaA PE=3 SV=1 6 161 1.0E-46
sp|Q5HGC7|BSAA_STAAC Glutathione peroxidase homolog BsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1 6 161 1.0E-46
sp|Q06652|GPX4_CITSI Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1 3 161 1.0E-46
sp|O23968|GPX4_HELAN Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1 10 166 1.0E-46
sp|Q9LYB4|GPX5_ARATH Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=1 SV=1 8 161 6.0E-46
sp|P30708|GPX4_NICSY Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1 6 161 9.0E-46
sp|Q9LEF0|GPX4_MESCR Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1 6 161 1.0E-45
sp|Q9FXS3|GPX4_TOBAC Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1 6 161 2.0E-45
sp|O48646|GPX6_ARATH Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2 1 161 1.0E-44
sp|O49069|GPX4_GOSHI Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1 6 161 6.0E-44
sp|O24031|GPX4_SOLLC Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1 1 161 2.0E-43
sp|Q8L910|GPX4_ARATH Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1 6 161 7.0E-43
sp|Q8LBU2|GPX8_ARATH Probable glutathione peroxidase 8 OS=Arabidopsis thaliana GN=GPX8 PE=2 SV=1 6 166 3.0E-42
sp|O23814|GPX4_SPIOL Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1 2 161 9.0E-42
sp|O22850|GPX3_ARATH Probable glutathione peroxidase 3, mitochondrial OS=Arabidopsis thaliana GN=GPX3 PE=1 SV=1 3 165 2.0E-41
sp|O02621|GPX1_CAEEL Glutathione peroxidase 1 OS=Caenorhabditis elegans GN=gpx-1 PE=3 SV=1 5 168 3.0E-41
sp|A1KV41|GPXA_NEIMF Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) GN=gpxA PE=3 SV=1 8 161 2.0E-40
sp|P0C2T0|GPXA_NEIMC Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C GN=gpxA PE=3 SV=1 8 161 2.0E-40
sp|P0A0T5|GPXA_NEIMB Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup B (strain MC58) GN=gpxA PE=3 SV=1 8 161 2.0E-40
sp|P0A0T4|GPXA_NEIMA Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=gpxA PE=3 SV=1 8 161 2.0E-40
sp|O04922|GPX2_ARATH Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1 3 165 2.0E-40
sp|O24296|GPX1_PEA Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum PE=2 SV=1 6 161 4.0E-40
sp|P52032|GPX1_ARATH Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=2 SV=2 2 161 9.0E-40
sp|O23970|GPX1_HELAN Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1 3 161 2.0E-39
sp|Q9SZ54|GPX7_ARATH Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=3 SV=2 2 161 4.0E-39
sp|P06610|BTUE_ECOLI Vitamin B12 transport periplasmic protein BtuE OS=Escherichia coli (strain K12) GN=btuE PE=3 SV=1 14 155 4.0E-39
sp|Q99LJ6|GPX7_MOUSE Glutathione peroxidase 7 OS=Mus musculus GN=Gpx7 PE=1 SV=1 3 171 6.0E-38
sp|A6QLY2|GPX7_BOVIN Glutathione peroxidase 7 OS=Bos taurus GN=GPX7 PE=2 SV=1 7 168 3.0E-37
sp|Q96SL4|GPX7_HUMAN Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 PE=1 SV=1 7 168 5.0E-37
sp|P73824|GPX2_SYNY3 Hydroperoxy fatty acid reductase gpx2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gpx2 PE=1 SV=1 28 155 2.0E-36
sp|O62327|GPX2_CAEEL Glutathione peroxidase 2 OS=Caenorhabditis elegans GN=gpx-2 PE=3 SV=1 14 168 2.0E-36
sp|Q00277|GPX1_SCHMA Glutathione peroxidase OS=Schistosoma mansoni GN=GPX1 PE=1 SV=2 3 168 2.0E-33
sp|Q5HKZ3|BSAA_STAEQ Glutathione peroxidase homolog BsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1 6 161 2.0E-33
sp|Q5U583|GPX8B_XENLA Probable glutathione peroxidase 8-B OS=Xenopus laevis GN=gpx8-b PE=2 SV=1 2 156 1.0E-30
sp|Q8TED1|GPX8_HUMAN Probable glutathione peroxidase 8 OS=Homo sapiens GN=GPX8 PE=1 SV=2 5 155 3.0E-30
sp|Q9D7B7|GPX8_MOUSE Probable glutathione peroxidase 8 OS=Mus musculus GN=Gpx8 PE=1 SV=1 4 148 1.0E-29
sp|Q6IRC8|GPX8A_XENLA Probable glutathione peroxidase 8-A OS=Xenopus laevis GN=gpx8-a PE=2 SV=1 2 156 2.0E-29
sp|Q7ZV14|GPX8_DANRE Probable glutathione peroxidase 8 OS=Danio rerio GN=gpx8 PE=2 SV=1 7 163 2.0E-29
sp|P36968|GPX4_PIG Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3 3 161 2.0E-29
sp|Q32QL6|GPX4_CALJA Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Callithrix jacchus GN=GPX4 PE=2 SV=2 3 161 3.0E-29
sp|Q4AEG9|GPX4_SAPAP Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sapajus apella GN=GPX4 PE=2 SV=2 3 161 7.0E-29
sp|Q2NL01|GPX8_BOVIN Probable glutathione peroxidase 8 OS=Bos taurus GN=GPX8 PE=2 SV=1 5 148 2.0E-28
sp|P36970|GPX41_RAT Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3 3 161 2.0E-28
sp|Q4AEH2|GPX4_PONPY Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Pongo pygmaeus GN=GPX4 PE=2 SV=2 3 161 2.0E-28
sp|P36969|GPX4_HUMAN Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Homo sapiens GN=GPX4 PE=1 SV=3 3 161 2.0E-28
sp|O08368|GPWA_PSEWI Glutathione peroxidase OS=Pseudomonas wisconsinensis GN=gpwA PE=3 SV=1 13 155 2.0E-28
sp|Q9N2J2|GPX4_BOVIN Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Bos taurus GN=GPX4 PE=2 SV=2 3 161 4.0E-28
sp|O70325|GPX41_MOUSE Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4 3 161 4.0E-28
sp|Q91XR8|GPX42_RAT Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3 3 161 2.0E-27
sp|Q4AEH0|GPX4_MACFU Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Macaca fuscata fuscata GN=GPX4 PE=2 SV=2 3 161 2.0E-27
sp|O18994|GPX5_PIG Epididymal secretory glutathione peroxidase OS=Sus scrofa GN=GPX5 PE=1 SV=1 6 167 1.0E-26
sp|Q4AEH5|GPX3_HYLLA Glutathione peroxidase 3 OS=Hylobates lar GN=GPX3 PE=2 SV=2 4 174 2.0E-26
sp|Q91XR9|GPX42_MOUSE Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=1 SV=3 3 161 2.0E-26
sp|Q4AEH1|GPX4_HYLLA Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2 3 161 3.0E-26
sp|Q4RSM6|GPX8_TETNG Probable glutathione peroxidase 8 OS=Tetraodon nigroviridis GN=gpx8 PE=3 SV=1 5 161 3.0E-26
sp|Q5RFG3|GPX3_PONPY Glutathione peroxidase 3 OS=Pongo pygmaeus GN=GPX3 PE=2 SV=3 4 174 1.0E-25
sp|P22352|GPX3_HUMAN Glutathione peroxidase 3 OS=Homo sapiens GN=GPX3 PE=1 SV=2 4 174 1.0E-25
sp|P37141|GPX3_BOVIN Glutathione peroxidase 3 OS=Bos taurus GN=GPX3 PE=2 SV=2 6 168 1.0E-25
sp|P23764|GPX3_RAT Glutathione peroxidase 3 OS=Rattus norvegicus GN=Gpx3 PE=2 SV=2 4 174 3.0E-25
sp|Q4AEH4|GPX3_MACFU Glutathione peroxidase 3 OS=Macaca fuscata fuscata GN=GPX3 PE=2 SV=2 4 174 5.0E-25
sp|P83564|GPX1_CHLRE Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2 2 168 6.0E-25
sp|P21765|GPX5_MOUSE Epididymal secretory glutathione peroxidase OS=Mus musculus GN=Gpx5 PE=2 SV=3 6 171 8.0E-25
sp|P28714|GPX5_MACFA Epididymal secretory glutathione peroxidase OS=Macaca fascicularis GN=GPX5 PE=2 SV=1 6 167 1.0E-24
sp|Q91WR8|GPX6_MOUSE Glutathione peroxidase 6 OS=Mus musculus GN=Gpx6 PE=2 SV=2 17 167 1.0E-24
sp|P30710|GPX5_RAT Epididymal secretory glutathione peroxidase OS=Rattus norvegicus GN=Gpx5 PE=2 SV=1 6 171 1.0E-24
sp|Q64625|GPX6_RAT Glutathione peroxidase 6 OS=Rattus norvegicus GN=Gpx6 PE=2 SV=1 17 167 3.0E-24
sp|O75715|GPX5_HUMAN Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1 6 167 4.0E-24
sp|P46412|GPX3_MOUSE Glutathione peroxidase 3 OS=Mus musculus GN=Gpx3 PE=1 SV=2 4 174 4.0E-24
sp|P52033|GPXC_DIRIM Glutathione peroxidase OS=Dirofilaria immitis PE=2 SV=1 3 168 8.0E-24
sp|Q4AEH3|GPX3_SAPAP Glutathione peroxidase 3 OS=Sapajus apella GN=GPX3 PE=2 SV=2 4 174 2.0E-23
sp|G9JJU2|GPX_PROCL Glutathione peroxidase OS=Procambarus clarkii GN=GPx PE=2 SV=1 15 161 2.0E-23
sp|O46607|GPX5_CANLF Epididymal secretory glutathione peroxidase OS=Canis lupus familiaris GN=GPX5 PE=2 SV=1 6 167 6.0E-23
sp|P67878|GPXC_BRUPA Cuticular glutathione peroxidase OS=Brugia pahangi PE=1 SV=1 3 168 3.0E-22
sp|P67877|GPXC_BRUMA Cuticular glutathione peroxidase OS=Brugia malayi PE=1 SV=1 3 168 3.0E-22
sp|P35666|GPXC_WUCBA Cuticular glutathione peroxidase OS=Wuchereria bancrofti PE=2 SV=1 3 168 3.0E-22
sp|P11352|GPX1_MOUSE Glutathione peroxidase 1 OS=Mus musculus GN=Gpx1 PE=1 SV=2 2 170 2.0E-21
sp|Q4AEI0|GPX2_PONPY Glutathione peroxidase 2 OS=Pongo pygmaeus GN=GPX2 PE=2 SV=2 4 151 2.0E-21
sp|Q4AEH9|GPX2_HYLLA Glutathione peroxidase 2 OS=Hylobates lar GN=GPX2 PE=2 SV=2 4 151 2.0E-21
sp|P18283|GPX2_HUMAN Glutathione peroxidase 2 OS=Homo sapiens GN=GPX2 PE=1 SV=3 4 151 2.0E-21
sp|Q95003|GPX3_CAEEL Glutathione peroxidase 3 OS=Caenorhabditis elegans GN=gpx-3 PE=3 SV=1 1 151 2.0E-21
sp|Q0EF98|GPX2_CALJA Glutathione peroxidase 2 OS=Callithrix jacchus GN=GPX2 PE=2 SV=2 4 166 4.0E-21
sp|Q4AEH7|GPX2_SAPAP Glutathione peroxidase 2 OS=Sapajus apella GN=GPX2 PE=2 SV=2 4 151 5.0E-21
sp|P04041|GPX1_RAT Glutathione peroxidase 1 OS=Rattus norvegicus GN=Gpx1 PE=1 SV=4 1 172 7.0E-21
sp|P83645|GPX2_RAT Glutathione peroxidase 2 OS=Rattus norvegicus GN=Gpx2 PE=1 SV=3 4 161 9.0E-21
sp|P59796|GPX6_HUMAN Glutathione peroxidase 6 OS=Homo sapiens GN=GPX6 PE=2 SV=2 6 167 9.0E-21
sp|Q9JHC0|GPX2_MOUSE Glutathione peroxidase 2 OS=Mus musculus GN=Gpx2 PE=2 SV=3 4 161 2.0E-20
sp|Q4AEH8|GPX2_MACFU Glutathione peroxidase 2 OS=Macaca fuscata fuscata GN=GPX2 PE=2 SV=2 4 151 3.0E-20
sp|P11909|GPX1_RABIT Glutathione peroxidase 1 OS=Oryctolagus cuniculus GN=GPX1 PE=2 SV=2 17 170 4.0E-19
sp|P00435|GPX1_BOVIN Glutathione peroxidase 1 OS=Bos taurus GN=GPX1 PE=1 SV=3 17 149 2.0E-18
sp|Q4AEI3|GPX1_PONPY Glutathione peroxidase 1 OS=Pongo pygmaeus GN=GPX1 PE=2 SV=2 6 149 3.0E-18
sp|Q865R2|GPX1_MACFU Glutathione peroxidase 1 OS=Macaca fuscata fuscata GN=GPX1 PE=2 SV=3 6 149 4.0E-18
sp|Q8MJ14|GPX1_PIG Glutathione peroxidase 1 OS=Sus scrofa GN=GPX1 PE=2 SV=2 6 149 4.0E-18
sp|P07203|GPX1_HUMAN Glutathione peroxidase 1 OS=Homo sapiens GN=GPX1 PE=1 SV=4 6 149 5.0E-18
sp|Q4AEI2|GPX1_HYLLA Glutathione peroxidase 1 OS=Hylobates lar GN=GPX1 PE=2 SV=2 6 149 5.0E-18
sp|Q8SSH7|GPX_ENCCU Probable phospholipid hydroperoxide glutathione peroxidase OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU02_0440 PE=1 SV=1 4 169 4.0E-17
sp|Q0EFA0|GPX1_PANTR Glutathione peroxidase 1 OS=Pan troglodytes GN=GPX1 PE=2 SV=2 6 149 5.0E-17
sp|Q98234|GPX_MCV1 Glutathione peroxidase OS=Molluscum contagiosum virus subtype 1 GN=GPX1 PE=3 SV=2 17 161 2.0E-16
sp|Q4AEI1|GPX1_SAPAP Glutathione peroxidase 1 OS=Sapajus apella GN=GPX1 PE=2 SV=2 6 149 1.0E-11
sp|Q0EF99|GPX1_CALJA Glutathione peroxidase 1 OS=Callithrix jacchus GN=GPX1 PE=2 SV=2 6 149 1.0E-11
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GO

GO Term Description Terminal node
GO:0006979 response to oxidative stress Yes
GO:0004602 glutathione peroxidase activity Yes
GO:0006950 response to stress No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No
GO:0016209 antioxidant activity No
GO:0004601 peroxidase activity No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0050896 response to stimulus No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Peroxisomal targeting signal 0.616 0.1868 0.1731 0.271 0.5449 0.0471 0.2682 0.2668 0.1441 0.4346

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1695
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2274
Ophiocordyceps australis map64 (Brazil) OphauB2|5997
Ophiocordyceps camponoti-floridani Ophcf2|06783
Ophiocordyceps camponoti-rufipedis Ophun1|1686
Ophiocordyceps kimflemingae Ophio5|8214
Ophiocordyceps subramaniannii Hirsu2|148 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|148
MASATSFYDFKPLDKRGQEVPLADYKGKVVLVVNTASKCGFTPQYAGLETLYKSIKDKHPDDFVILGFPCNQFGA
QEPGSDDEIQNFCQVNYGVSFPIMQKVEVNGDKASPLYQWLKEEKPGLMGLKRIKWNFEKFLVGRDGKVKGRWAS
TTKPETLEQPILDELNKKEGIPVRPAL*
Coding >Hirsu2|148
ATGGCGTCGGCAACGAGCTTCTACGACTTCAAGCCGCTCGACAAGCGCGGCCAAGAGGTGCCCTTGGCCGACTAC
AAGGGCAAGGTGGTGCTGGTGGTCAACACGGCGTCCAAGTGCGGCTTCACGCCGCAGTACGCCGGGCTCGAGACG
CTGTACAAGTCGATCAAGGACAAGCACCCGGACGACTTCGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGCGCC
CAGGAGCCCGGCTCGGACGACGAGATCCAGAACTTCTGCCAGGTCAACTACGGCGTCAGCTTCCCCATCATGCAG
AAGGTAGAGGTCAACGGCGACAAGGCCAGCCCCCTGTACCAGTGGCTCAAGGAGGAGAAGCCGGGCCTGATGGGC
CTGAAGCGCATCAAGTGGAACTTTGAAAAGTTCCTCGTCGGCCGCGACGGCAAGGTCAAGGGCCGCTGGGCCAGC
ACCACCAAGCCCGAGACGCTGGAGCAGCCCATCCTCGACGAGCTGAACAAGAAGGAAGGAATACCTGTTCGTCCA
GCATTGTAG
Transcript >Hirsu2|148
ATGGCGTCGGCAACGAGCTTCTACGACTTCAAGCCGCTCGACAAGCGCGGCCAAGAGGTGCCCTTGGCCGACTAC
AAGGGCAAGGTGGTGCTGGTGGTCAACACGGCGTCCAAGTGCGGCTTCACGCCGCAGTACGCCGGGCTCGAGACG
CTGTACAAGTCGATCAAGGACAAGCACCCGGACGACTTCGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGCGCC
CAGGAGCCCGGCTCGGACGACGAGATCCAGAACTTCTGCCAGGTCAACTACGGCGTCAGCTTCCCCATCATGCAG
AAGGTAGAGGTCAACGGCGACAAGGCCAGCCCCCTGTACCAGTGGCTCAAGGAGGAGAAGCCGGGCCTGATGGGC
CTGAAGCGCATCAAGTGGAACTTTGAAAAGTTCCTCGTCGGCCGCGACGGCAAGGTCAAGGGCCGCTGGGCCAGC
ACCACCAAGCCCGAGACGCTGGAGCAGCCCATCCTCGACGAGCTGAACAAGAAGGAAGGAATACCTGTTCGTCCA
GCATTGTAG
Gene >Hirsu2|148
ATGGCGTCGGCAACGAGCTTCTACGACTTCAAGCCGCTCGACAGTAGGCAGTCCCCCGCCGCGCCCCCTGTCCAT
GTCGGGATCGGGCTGACGCTAGAGCAGAGCGCGGCCAAGAGGTGCCCTTGGCCGACTACAAGGGCAAGGTGGTGC
TGGTGGTCAACACGGCGTCCAAGTGCGGCTTCACGCCGCAGTACGCCGGGCTCGAGACGCTGTACAAGTCGATCA
AGGACAAGCACCCGGACGACTTCGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGCGCCCAGGAGCCCGGCTCGG
ACGACGAGATCCAGAACTTCTGCCAGGTCAACTACGGCGTCAGCTTCCCCATCATGCAGAAGGTAGAGGTCAACG
GCGACAAGGCCAGCCCCCTGTACCAGTGGCTCAAGGAGGAGAAGCCGGGCCTGATGGGCCTGAAGCGCATCAAGT
GGAACTTTGAAAAGTTCCTCGTCGGCCGCGACGGCAAGGTCAAGGGCCGCTGGGCCAGCACCACCAAGCCCGAGA
CGCTGGAGCAGCCCATCCTCGACGAGCTGAACAAGAAGGAAGGGTGAGCGCTCGCCCCGACGAGGCCGTGGGGGA
CGAGGGGAAGAGGGGGGGAGGGGTGTGTATTGGAAGCTGGAGCTGAGTGCCTCCAGAATACCTGTTCGTCCAGCA
TTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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