© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1446 |
| Gene name | |
| Location | Contig_1319:735..1741 |
| Strand | - |
| Gene length (bp) | 1006 |
| Transcript length (bp) | 840 |
| Coding sequence length (bp) | 840 |
| Protein length (aa) | 280 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| 2 | 44 | 66 | 22 |
| 3 | 81 | 98 | 17 |
| 4 | 119 | 141 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1446 MVDLEWDPSHVPNVKLALHTIQILFTFTIWCLEIAVFVGRDAKIVVNNAWTFSVCFLSIPAWMYLIMAPRFAHGR RFAEPRAMLVIDVLFAILWLSAFATQAAYNTANQCGQVCHLSKAIVGLGVFNALLFAASSFVSAYTLKYYNFHGT LPGYDSRQLLAPNNNNNSSSIDPDKAAFSTADEDYERVNLDDHEAGGAATYSDAGRYGHANPYSADDFDDPNRYG ALPPRNNDLFNTETEYNSGGRITPAPASYASAPHNPYNDEPARFPPGNYDRVHP* |
| Coding | >Hirsu2|1446 ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG ACATTCTCGGTGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTTCGCCCATGGGCGC CGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTCGGCCTTTGCCACC CAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGTCGGACTCGGCGTC TTCAACGCCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTACAACTTCCACGGCACC CTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAGCATCGACCCCGACAAG GCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGCCGGCGGCGCGGCCACC TACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGACCCCAACCGCTACGGC GCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGGGAGAATCACGCCGGCC CCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCCGCCCGGCAACTACGAC CGCGTGCACCCCTGA |
| Transcript | >Hirsu2|1446 ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG ACATTCTCGGTGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTTCGCCCATGGGCGC CGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTCGGCCTTTGCCACC CAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGTCGGACTCGGCGTC TTCAACGCCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTACAACTTCCACGGCACC CTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAGCATCGACCCCGACAAG GCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGCCGGCGGCGCGGCCACC TACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGACCCCAACCGCTACGGC GCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGGGAGAATCACGCCGGCC CCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCCGCCCGGCAACTACGAC CGCGTGCACCCCTGA |
| Gene | >Hirsu2|1446 ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG ACATTCTCGGTGGTGCGTCGCCAGGCCCGCAACTGCCCGTCCCCCTTTCCGCCACCACACGGGTCGCTGACTTGA TTTCTTTTTTCCTCCTCCGCTGCAGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTT CGCCCATGGGCGCCGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTC GGCCTTTGCCACCCAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGT CGGACTCGGCGTCTTCAACGCGTAAGTCGCGCATCGTCATCCGATTTTTCCAGCGCGCCTCCCTCTCTCCCCGAC GTGAGCTAATCCGTTCCCCGGCAGCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTA CAACTTCCACGGCACCCTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAG CATCGACCCCGACAAGGCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGC CGGCGGCGCGGCCACCTACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGA CCCCAACCGCTACGGCGCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGG GAGAATCACGCCGGCCCCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCC GCCCGGCAACTACGACCGCGTGCACCCCTGA |