Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1446
Gene name
LocationContig_1319:735..1741
Strand-
Gene length (bp)1006
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 44 66 22
3 81 98 17
4 119 141 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1446
MVDLEWDPSHVPNVKLALHTIQILFTFTIWCLEIAVFVGRDAKIVVNNAWTFSVCFLSIPAWMYLIMAPRFAHGR
RFAEPRAMLVIDVLFAILWLSAFATQAAYNTANQCGQVCHLSKAIVGLGVFNALLFAASSFVSAYTLKYYNFHGT
LPGYDSRQLLAPNNNNNSSSIDPDKAAFSTADEDYERVNLDDHEAGGAATYSDAGRYGHANPYSADDFDDPNRYG
ALPPRNNDLFNTETEYNSGGRITPAPASYASAPHNPYNDEPARFPPGNYDRVHP*
Coding >Hirsu2|1446
ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC
ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG
ACATTCTCGGTGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTTCGCCCATGGGCGC
CGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTCGGCCTTTGCCACC
CAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGTCGGACTCGGCGTC
TTCAACGCCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTACAACTTCCACGGCACC
CTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAGCATCGACCCCGACAAG
GCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGCCGGCGGCGCGGCCACC
TACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGACCCCAACCGCTACGGC
GCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGGGAGAATCACGCCGGCC
CCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCCGCCCGGCAACTACGAC
CGCGTGCACCCCTGA
Transcript >Hirsu2|1446
ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC
ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG
ACATTCTCGGTGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTTCGCCCATGGGCGC
CGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTCGGCCTTTGCCACC
CAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGTCGGACTCGGCGTC
TTCAACGCCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTACAACTTCCACGGCACC
CTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAGCATCGACCCCGACAAG
GCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGCCGGCGGCGCGGCCACC
TACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGACCCCAACCGCTACGGC
GCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGGGAGAATCACGCCGGCC
CCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCCGCCCGGCAACTACGAC
CGCGTGCACCCCTGA
Gene >Hirsu2|1446
ATGGTCGACCTGGAGTGGGATCCCAGCCACGTCCCCAACGTCAAGTTGGCCCTGCACACGATCCAGATTCTCTTC
ACCTTCACCATCTGGTGTCTGGAAATCGCCGTCTTCGTCGGCAGAGACGCTAAGATTGTCGTCAATAATGCCTGG
ACATTCTCGGTGGTGCGTCGCCAGGCCCGCAACTGCCCGTCCCCCTTTCCGCCACCACACGGGTCGCTGACTTGA
TTTCTTTTTTCCTCCTCCGCTGCAGTGCTTCTTGTCCATACCCGCCTGGATGTATCTGATCATGGCCCCCCGTTT
CGCCCATGGGCGCCGCTTCGCCGAGCCCAGGGCCATGCTCGTCATCGACGTCCTCTTTGCCATCCTGTGGCTGTC
GGCCTTTGCCACCCAGGCGGCCTACAACACGGCCAACCAGTGCGGCCAGGTCTGCCATCTGAGCAAGGCCATCGT
CGGACTCGGCGTCTTCAACGCGTAAGTCGCGCATCGTCATCCGATTTTTCCAGCGCGCCTCCCTCTCTCCCCGAC
GTGAGCTAATCCGTTCCCCGGCAGCCTGCTCTTCGCCGCCTCATCCTTCGTCAGCGCGTATACCCTCAAGTACTA
CAACTTCCACGGCACCCTCCCCGGTTACGACTCTCGCCAGCTGCTCGCCCCCAACAACAACAACAACAGCAGCAG
CATCGACCCCGACAAGGCCGCCTTCTCCACGGCCGACGAGGACTACGAGCGCGTCAACCTGGACGACCACGAAGC
CGGCGGCGCGGCCACCTACTCGGACGCCGGACGCTACGGCCACGCAAACCCCTACAGCGCCGACGACTTCGACGA
CCCCAACCGCTACGGCGCCCTGCCGCCGCGCAACAACGACCTCTTCAACACCGAGACCGAGTACAACTCGGGAGG
GAGAATCACGCCGGCCCCGGCCTCGTACGCAAGCGCGCCGCACAATCCGTACAACGACGAGCCGGCGCGCTTCCC
GCCCGGCAACTACGACCGCGTGCACCCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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