Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1439
Gene name
Location	Contig_1315:2940..4438
Strand	+
Gene length (bp)	1498
Transcript length (bp)	1281
Coding sequence length (bp)	1281
Protein length (aa)	427

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01266	DAO	FAD dependent oxidoreductase	1.8E-32	4	386
PF13450	NAD_binding_8	NAD(P)-binding Rossmann-like domain	5.5E-05	6	57

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O43029\|FAP1_SCHPO	L-pipecolate oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fap1 PE=1 SV=1	2	404	3.0E-39
sp\|Q9UTM9\|FAP2_SCHPO	L-saccharopine oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fap2 PE=1 SV=1	5	424	1.0E-36
sp\|B7LT77\|MTOX_ESCF3	N-methyl-L-tryptophan oxidase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=solA PE=3 SV=1	5	389	5.0E-09
sp\|P40859\|MSOX_BACB0	Monomeric sarcosine oxidase OS=Bacillus sp. (strain B-0618) GN=soxA PE=1 SV=2	5	212	1.0E-06

GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0055114	oxidation-reduction process	Yes
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0003674	molecular_function	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1439 MTSYLIIGAGNFGAATALTLARRGDARVTLIDTAPFPNPRAASHDVNKIVRDDYPDKLYMRMLIKAMPKWRNDKL YSTYYHEVGMLRADESNFGQESMAAYRDMGVANDSEFLPVAEVRRRWNGAFATANFDGLDKILFNPTVGYAEADK ALGAVVQAAVDHGVEYVVGVVRRLNLNAAGQCTGLTLETGETMQADKVLLAAGARTPALLAQSAPEKKELHVGDR VVATGAISFYAKLFGEQRDKFAPIPVLKNCLPQVKGEGMSILKDGTIKFNCDMCFTNYVTFPPTGERMSVAPDQN VFNVWTGPRFISFFQERARKTIDGLYGKEVEEIPIDAYRMCWDASTPTHDFLITPHPHCQGLYVATGGSFHGWKF LPVIGDYVADMMQGSLDAEYTDRWAWDKKGGDGHSANPTYQVVGDLQDWIV*
Coding	>Hirsu2\|1439 ATGACTTCCTACCTCATCATTGGCGCCGGCAACTTTGGCGCCGCCACCGCCCTGACCCTCGCCAGGCGCGGCGAT GCCAGGGTGACGCTTATCGACACGGCCCCCTTTCCCAACCCGAGAGCCGCATCGCATGATGTCAACAAGATCGTC CGCGACGACTACCCCGACAAGCTCTACATGCGCATGCTCATCAAGGCCATGCCCAAATGGCGCAACGACAAGCTG TACAGCACCTATTACCACGAGGTCGGCATGCTGCGGGCCGACGAATCCAATTTTGGCCAGGAGAGCATGGCCGCC TACAGAGACATGGGCGTCGCCAACGACTCCGAGTTCTTGCCCGTCGCCGAGGTGCGCCGGCGCTGGAACGGCGCC TTTGCCACGGCCAACTTCGACGGCCTGGACAAGATCCTCTTCAACCCAACCGTTGGCTACGCCGAGGCCGACAAG GCACTGGGGGCCGTGGTGCAGGCCGCCGTGGATCACGGCGTCGAGTACGTCGTGGGCGTGGTCAGGAGGCTAAAC CTGAACGCTGCCGGCCAATGTACGGGCCTCACTTTGGAGACGGGTGAGACAATGCAGGCCGACAAGGTCCTGCTG GCGGCGGGTGCCCGCACCCCGGCTCTGCTGGCCCAGAGCGCGCCGGAGAAGAAGGAGCTGCACGTTGGTGACCGT GTGGTGGCCACCGGGGCCATCAGCTTCTACGCGAAGCTCTTTGGGGAACAAAGGGACAAGTTTGCGCCAATTCCG GTTCTCAAGAACTGCTTGCCGCAGGTCAAAGGCGAGGGCATGTCCATTCTCAAGGACGGCACCATCAAGTTCAAC TGCGACATGTGCTTCACCAACTACGTCACATTTCCTCCGACCGGTGAACGCATGTCGGTAGCCCCGGACCAAAAC GTCTTCAACGTGTGGACCGGACCGCGCTTCATCAGCTTCTTCCAGGAACGTGCACGCAAGACTATTGACGGCCTT TACGGCAAGGAAGTCGAAGAGATTCCCATCGACGCCTATCGAATGTGTTGGGACGCATCGACTCCCACCCACGAC TTTCTGATCACGCCGCATCCGCACTGCCAAGGCCTCTACGTGGCCACGGGCGGCTCGTTTCACGGATGGAAATTC TTGCCGGTGATTGGAGACTATGTTGCCGACATGATGCAGGGCAGCCTGGATGCCGAATACACTGACCGTTGGGCT TGGGACAAGAAGGGCGGTGATGGTCATTCTGCCAATCCGACATACCAAGTTGTCGGGGACCTGCAGGACTGGATC GTGTGA
Transcript	>Hirsu2\|1439 ATGACTTCCTACCTCATCATTGGCGCCGGCAACTTTGGCGCCGCCACCGCCCTGACCCTCGCCAGGCGCGGCGAT GCCAGGGTGACGCTTATCGACACGGCCCCCTTTCCCAACCCGAGAGCCGCATCGCATGATGTCAACAAGATCGTC CGCGACGACTACCCCGACAAGCTCTACATGCGCATGCTCATCAAGGCCATGCCCAAATGGCGCAACGACAAGCTG TACAGCACCTATTACCACGAGGTCGGCATGCTGCGGGCCGACGAATCCAATTTTGGCCAGGAGAGCATGGCCGCC TACAGAGACATGGGCGTCGCCAACGACTCCGAGTTCTTGCCCGTCGCCGAGGTGCGCCGGCGCTGGAACGGCGCC TTTGCCACGGCCAACTTCGACGGCCTGGACAAGATCCTCTTCAACCCAACCGTTGGCTACGCCGAGGCCGACAAG GCACTGGGGGCCGTGGTGCAGGCCGCCGTGGATCACGGCGTCGAGTACGTCGTGGGCGTGGTCAGGAGGCTAAAC CTGAACGCTGCCGGCCAATGTACGGGCCTCACTTTGGAGACGGGTGAGACAATGCAGGCCGACAAGGTCCTGCTG GCGGCGGGTGCCCGCACCCCGGCTCTGCTGGCCCAGAGCGCGCCGGAGAAGAAGGAGCTGCACGTTGGTGACCGT GTGGTGGCCACCGGGGCCATCAGCTTCTACGCGAAGCTCTTTGGGGAACAAAGGGACAAGTTTGCGCCAATTCCG GTTCTCAAGAACTGCTTGCCGCAGGTCAAAGGCGAGGGCATGTCCATTCTCAAGGACGGCACCATCAAGTTCAAC TGCGACATGTGCTTCACCAACTACGTCACATTTCCTCCGACCGGTGAACGCATGTCGGTAGCCCCGGACCAAAAC GTCTTCAACGTGTGGACCGGACCGCGCTTCATCAGCTTCTTCCAGGAACGTGCACGCAAGACTATTGACGGCCTT TACGGCAAGGAAGTCGAAGAGATTCCCATCGACGCCTATCGAATGTGTTGGGACGCATCGACTCCCACCCACGAC TTTCTGATCACGCCGCATCCGCACTGCCAAGGCCTCTACGTGGCCACGGGCGGCTCGTTTCACGGATGGAAATTC TTGCCGGTGATTGGAGACTATGTTGCCGACATGATGCAGGGCAGCCTGGATGCCGAATACACTGACCGTTGGGCT TGGGACAAGAAGGGCGGTGATGGTCATTCTGCCAATCCGACATACCAAGTTGTCGGGGACCTGCAGGACTGGATC GTGTGA
Gene	>Hirsu2\|1439 ATGACTTCCTACCTCATCATTGGCGCCGGCAACTTTGGCGCCGCCACCGCCCTGACCCTCGCCAGGCGCGGCGAT GCCAGGGTGACGCTTATCGACACGGCCCCCTTTCCCAACCCGAGAGCCGCATCGCATGATGTCAACAAGATCGTC CGCGACGACTACCCCGACAAGCTCTACATGCGCATGCTCATCAAGGCCATGCCCAAATGGCGCAACGACAAGCTG TACAGCACCTATTACCACGAGGTCGGCATGCTGCGGGCCGACGAATCCAATTTTGGCCAGGAGAGCATGGCCGCC TACAGAGACATGGGCGTCGCCAACGACTCCGAGTTCTTGCCCGTCGCCGAGGTGCGCCGGCGCTGGAACGGCGCC TTTGCCACGGCCAACTTCGACGGCCTGGACAAGATCCTCTTCAACCCAACCGTTGGCTACGCCGAGGCCGACAAG GCACTGGGGGCCGTGGTGCAGGCCGCCGTGGATCACGGCGTCGAGTACGTCGTGGGCGTGGTCAGGAGGCTAAAC CTGAACGCTGCCGGCCAATGTACGGGCCTCACTTTGGAGACGGGTGAGACAATGCAGGCCGACAAGGTCCTGCTG GCGGCGGGTGCCCGCACCCCGGCTCTGCTGGCCCAGAGCGCGCCGGAGAAGAAGGAGCTGCACGTTGGTGACCGT GTGGTGGCCACCGGGGCCATCAGCTTCTACGCGAAGCTCTTTGGGGAACAAAGGGACAAGTTTGCGCCAATTCCG GTTCTCAAGAACTGCTTGCCGCAGGTCAAAGGTACGTCCCCGCGAGGCCATTGGCGAGGATGAGACTGACCGGTC TGGCGCGCCGGCCCGCTGCAGGCGAGGGCATGTCCATTCTCAAGGACGGCACCATCAAGTTCAACTGCGACATGT GCTTCACCAACTACGTCACATTTCCTCCGACCGGTGAACGCATGTCGGTAGCCCCGGACCAAAACGTCTTCAACG TGTGGACCGGACCGCGCTTCATCAGCTTCTTCCAGGAACGTGCACGCAAGACTATTGACGGCCTTTACGGCAAGG AAGTCGAAGAGATTCCCATCGACGCCTATCGAATGTGTTGGTAGGTCCTCCTCTCATCGGATCGAACCACATCAA AGCCCTCCCCCCCCCACCCCCCTCTTTTTTTTTCCCTTTCTCTCGAAGGTCATCAAGACATGCAATCTCGACCAA TGGGAGAGACGACTTGTTGACGGCTCGGACGTTACCTTTTAGGGACGCATCGACTCCCACCCACGACTTTCTGAT CACGCCGCATCCGCACTGCCAAGGCCTCTACGTGGCCACGGGCGGCTCGTTTCACGGATGGAAATTCTTGCCGGT GATTGGAGACTATGTTGCCGACATGATGCAGGGCAGCCTGGATGCCGAATACACTGACCGTTGGGCTTGGGACAA GAAGGGCGGTGATGGTCATTCTGCCAATCCGACATACCAAGTTGTCGGGGACCTGCAGGACTGGATCGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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