© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|143 |
| Gene name | |
| Location | Contig_1022:502..3285 |
| Strand | - |
| Gene length (bp) | 2783 |
| Transcript length (bp) | 2589 |
| Coding sequence length (bp) | 2589 |
| Protein length (aa) | 863 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00656 | Peptidase_C14 | Caspase domain | 1.6E-04 | 97 | 223 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.4041 | 0.9066 | 0.2141 | 0.0364 | 0.0735 | 0.0017 | 0.0589 | 0.0504 | 0.0481 | 0.0089 |
| Orthofinder run ID | 4 |
| Orthogroup | 1675 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|143 MEPTSKKRKLAPKVNASSAPNSQPSQYAHETTPPQSQPQQQPPYALHDAPLFERHDFESFARHLQDAAMLIQRQT ERPPYGDVSVLLLNWQDDVAVQEDLLALEQIFQKHYNFDTQRWQIPTVPNPSIKLGVQMASFLEHARPNHLLVIY YAGHGYVGPDNQLYWACSARDDAAKLKWDGVRCLFEDAQSDILLLLDTCAIPDPAAAGSHGVKQAIAACSPEHGL RGDSSRSFTSNLAEALHKLSTGRPFSVQRLYDEVLSQRQQHLAQAARVPNGGSNPAPHAQLPVFFTLTPGKGQNL TLAPLSSRALSASSKNGGEAADARIVRGREDHFIDPESVADLRFDESRILVCTTFVGDASSDMSFFTQWLQNTPP LGNKIAVEGMFLGPPTMLLISMPHSIWNVVQHDKVCCFLGYISSHNMLHLYEKLVGPAGVRPSAKEVEDGRILLE ARELAAVTPARVRREHDGHDQSYHASASSERSVHGDRPEHIPQSSPPRPPFSAVGPAAGPIKPKDDVEDSAEMQE AAEQLKALSHVRHRSDETIPAAQRPRTSLPNAVPNPPRDGNAQPAPDAPHTEAANDEAAAAEPKSASSSRAKAPR RFIPKQETRCNHCSHAPFKDSSSLRKHIAAAHTRPFPCAFSFAGCTSTFGSKNEWKRHIASQHLCLQYYRCSECP QGAGEGKGNEFNRKDLFTQHLRRMHAPFHVKRAMSKGETKLLAEWEETVKNMQQSCLVTRRQPPQRSACPKPGCQ HEFNGAGSWDEWTEHVGRHMEKSEAQSLGVDPLLAQWALDEGIIEAKDDGEYRLCATNGMVGGQGGNGGPALERK DSSTLISLADSSQLEDTTMTDARPASDDPGDRLAPGA* |
| Coding | >Hirsu2|143 ATGGAGCCAACCAGTAAGAAGCGAAAGTTGGCTCCGAAAGTCAACGCTTCTTCGGCCCCCAATTCTCAGCCTAGC CAGTACGCCCACGAAACGACACCGCCGCAATCGCAGCCCCAGCAGCAGCCGCCCTACGCCCTTCACGATGCCCCC CTCTTCGAGCGTCACGACTTCGAGTCCTTTGCCCGCCACCTCCAGGATGCGGCCATGCTGATCCAGCGCCAAACC GAACGGCCGCCATACGGGGACGTGTCGGTCCTGCTGCTGAACTGGCAGGACGACGTTGCCGTCCAAGAAGACCTG CTTGCCCTCGAACAAATTTTCCAGAAGCACTACAATTTTGATACGCAGCGATGGCAGATCCCCACCGTCCCCAAT CCCAGCATCAAGCTCGGCGTCCAAATGGCCTCCTTTCTCGAGCATGCGCGGCCCAATCATCTCCTGGTCATCTAC TACGCCGGCCATGGCTACGTCGGCCCCGATAACCAGCTCTACTGGGCCTGCTCCGCTCGCGATGACGCGGCCAAG CTCAAGTGGGATGGCGTGCGCTGCTTGTTCGAGGATGCGCAGTCCGACATCCTCTTGCTGCTCGACACGTGCGCC ATTCCTGACCCTGCCGCGGCCGGCAGCCACGGCGTGAAGCAGGCCATCGCCGCCTGTTCCCCGGAGCATGGTTTG CGGGGCGACTCGAGCCGCTCGTTCACGTCGAACCTGGCCGAGGCCCTCCACAAGCTCAGCACCGGGAGGCCGTTC AGCGTGCAACGCCTGTACGACGAGGTGCTCTCGCAGAGGCAGCAGCATCTGGCTCAGGCGGCCCGCGTGCCCAAC GGGGGCTCCAATCCTGCGCCCCACGCCCAGCTGCCCGTCTTCTTCACCCTCACCCCCGGCAAGGGCCAGAACCTG ACGTTGGCCCCGCTCTCTTCCCGCGCGCTGTCGGCGTCATCCAAGAACGGCGGCGAGGCGGCTGACGCTCGCATC GTGCGAGGCCGAGAGGACCACTTCATCGACCCCGAGTCCGTTGCCGACCTCCGATTCGACGAGTCCAGGATCCTG GTCTGCACCACCTTTGTCGGCGACGCCAGCTCCGACATGTCCTTTTTCACCCAATGGCTCCAGAACACGCCCCCT CTGGGCAACAAGATAGCCGTCGAGGGCATGTTCCTCGGCCCCCCCACGATGCTCCTCATATCCATGCCTCACTCG ATATGGAACGTCGTGCAGCACGACAAAGTCTGCTGCTTCCTCGGCTACATAAGCTCCCATAACATGCTCCACTTG TATGAGAAGCTGGTTGGACCCGCGGGTGTGAGGCCCTCCGCCAAGGAGGTCGAGGACGGCCGGATACTCTTGGAG GCGAGGGAGCTGGCCGCGGTGACGCCGGCGCGCGTGCGGAGAGAACACGACGGCCACGACCAGTCGTACCATGCC TCGGCGTCGTCGGAGCGCTCGGTACACGGCGATCGACCGGAACACATCCCCCAGAGCAGCCCGCCGAGACCACCG TTTTCCGCGGTCGGTCCCGCCGCCGGGCCCATCAAGCCCAAGGACGACGTCGAGGACTCGGCCGAGATGCAGGAG GCGGCGGAGCAACTCAAGGCCCTGAGCCACGTGCGCCATCGGAGCGACGAGACGATCCCAGCCGCCCAGCGCCCC CGCACCAGCCTGCCCAATGCCGTGCCGAACCCCCCGCGTGACGGCAACGCGCAGCCCGCCCCCGACGCGCCTCAC ACCGAGGCCGCCAACGACGAGGCCGCGGCGGCAGAGCCCAAGTCGGCCTCCAGCTCGCGCGCCAAGGCTCCTCGA CGCTTCATCCCCAAGCAGGAGACGCGCTGCAACCACTGCAGCCACGCGCCCTTCAAGGACTCGTCGTCTCTGCGC AAGCACATCGCGGCCGCGCACACGCGGCCCTTCCCTTGCGCCTTCTCATTCGCCGGCTGCACCAGCACCTTCGGG TCCAAGAACGAGTGGAAACGGCACATTGCGTCGCAGCACCTCTGCCTTCAGTACTACCGGTGTTCCGAGTGCCCG CAGGGCGCGGGCGAGGGTAAGGGCAACGAGTTCAACCGCAAGGATCTGTTCACGCAGCACCTGCGGCGCATGCAC GCTCCCTTCCACGTCAAGAGGGCCATGTCCAAGGGCGAGACCAAGCTTCTGGCCGAGTGGGAGGAGACGGTCAAG AACATGCAGCAGTCGTGCCTCGTGACGCGGCGGCAGCCCCCGCAGAGGTCGGCCTGCCCCAAGCCCGGCTGCCAA CACGAGTTCAACGGAGCCGGGTCCTGGGACGAGTGGACGGAGCACGTGGGGCGGCACATGGAGAAGAGCGAGGCA CAGAGCCTCGGCGTGGATCCCCTGCTCGCGCAGTGGGCGCTCGACGAGGGCATCATCGAGGCCAAGGACGATGGA GAGTATCGGCTGTGTGCCACCAACGGCATGGTCGGCGGCCAAGGCGGCAACGGCGGCCCGGCGCTGGAGCGCAAG GACTCTTCGACGCTCATATCGCTCGCCGACTCATCTCAGCTCGAGGACACCACCATGACCGACGCCCGGCCGGCG AGCGACGACCCGGGCGACAGACTGGCCCCGGGCGCGTGA |
| Transcript | >Hirsu2|143 ATGGAGCCAACCAGTAAGAAGCGAAAGTTGGCTCCGAAAGTCAACGCTTCTTCGGCCCCCAATTCTCAGCCTAGC CAGTACGCCCACGAAACGACACCGCCGCAATCGCAGCCCCAGCAGCAGCCGCCCTACGCCCTTCACGATGCCCCC CTCTTCGAGCGTCACGACTTCGAGTCCTTTGCCCGCCACCTCCAGGATGCGGCCATGCTGATCCAGCGCCAAACC GAACGGCCGCCATACGGGGACGTGTCGGTCCTGCTGCTGAACTGGCAGGACGACGTTGCCGTCCAAGAAGACCTG CTTGCCCTCGAACAAATTTTCCAGAAGCACTACAATTTTGATACGCAGCGATGGCAGATCCCCACCGTCCCCAAT CCCAGCATCAAGCTCGGCGTCCAAATGGCCTCCTTTCTCGAGCATGCGCGGCCCAATCATCTCCTGGTCATCTAC TACGCCGGCCATGGCTACGTCGGCCCCGATAACCAGCTCTACTGGGCCTGCTCCGCTCGCGATGACGCGGCCAAG CTCAAGTGGGATGGCGTGCGCTGCTTGTTCGAGGATGCGCAGTCCGACATCCTCTTGCTGCTCGACACGTGCGCC ATTCCTGACCCTGCCGCGGCCGGCAGCCACGGCGTGAAGCAGGCCATCGCCGCCTGTTCCCCGGAGCATGGTTTG CGGGGCGACTCGAGCCGCTCGTTCACGTCGAACCTGGCCGAGGCCCTCCACAAGCTCAGCACCGGGAGGCCGTTC AGCGTGCAACGCCTGTACGACGAGGTGCTCTCGCAGAGGCAGCAGCATCTGGCTCAGGCGGCCCGCGTGCCCAAC GGGGGCTCCAATCCTGCGCCCCACGCCCAGCTGCCCGTCTTCTTCACCCTCACCCCCGGCAAGGGCCAGAACCTG ACGTTGGCCCCGCTCTCTTCCCGCGCGCTGTCGGCGTCATCCAAGAACGGCGGCGAGGCGGCTGACGCTCGCATC GTGCGAGGCCGAGAGGACCACTTCATCGACCCCGAGTCCGTTGCCGACCTCCGATTCGACGAGTCCAGGATCCTG GTCTGCACCACCTTTGTCGGCGACGCCAGCTCCGACATGTCCTTTTTCACCCAATGGCTCCAGAACACGCCCCCT CTGGGCAACAAGATAGCCGTCGAGGGCATGTTCCTCGGCCCCCCCACGATGCTCCTCATATCCATGCCTCACTCG ATATGGAACGTCGTGCAGCACGACAAAGTCTGCTGCTTCCTCGGCTACATAAGCTCCCATAACATGCTCCACTTG TATGAGAAGCTGGTTGGACCCGCGGGTGTGAGGCCCTCCGCCAAGGAGGTCGAGGACGGCCGGATACTCTTGGAG GCGAGGGAGCTGGCCGCGGTGACGCCGGCGCGCGTGCGGAGAGAACACGACGGCCACGACCAGTCGTACCATGCC TCGGCGTCGTCGGAGCGCTCGGTACACGGCGATCGACCGGAACACATCCCCCAGAGCAGCCCGCCGAGACCACCG TTTTCCGCGGTCGGTCCCGCCGCCGGGCCCATCAAGCCCAAGGACGACGTCGAGGACTCGGCCGAGATGCAGGAG GCGGCGGAGCAACTCAAGGCCCTGAGCCACGTGCGCCATCGGAGCGACGAGACGATCCCAGCCGCCCAGCGCCCC CGCACCAGCCTGCCCAATGCCGTGCCGAACCCCCCGCGTGACGGCAACGCGCAGCCCGCCCCCGACGCGCCTCAC ACCGAGGCCGCCAACGACGAGGCCGCGGCGGCAGAGCCCAAGTCGGCCTCCAGCTCGCGCGCCAAGGCTCCTCGA CGCTTCATCCCCAAGCAGGAGACGCGCTGCAACCACTGCAGCCACGCGCCCTTCAAGGACTCGTCGTCTCTGCGC AAGCACATCGCGGCCGCGCACACGCGGCCCTTCCCTTGCGCCTTCTCATTCGCCGGCTGCACCAGCACCTTCGGG TCCAAGAACGAGTGGAAACGGCACATTGCGTCGCAGCACCTCTGCCTTCAGTACTACCGGTGTTCCGAGTGCCCG CAGGGCGCGGGCGAGGGTAAGGGCAACGAGTTCAACCGCAAGGATCTGTTCACGCAGCACCTGCGGCGCATGCAC GCTCCCTTCCACGTCAAGAGGGCCATGTCCAAGGGCGAGACCAAGCTTCTGGCCGAGTGGGAGGAGACGGTCAAG AACATGCAGCAGTCGTGCCTCGTGACGCGGCGGCAGCCCCCGCAGAGGTCGGCCTGCCCCAAGCCCGGCTGCCAA CACGAGTTCAACGGAGCCGGGTCCTGGGACGAGTGGACGGAGCACGTGGGGCGGCACATGGAGAAGAGCGAGGCA CAGAGCCTCGGCGTGGATCCCCTGCTCGCGCAGTGGGCGCTCGACGAGGGCATCATCGAGGCCAAGGACGATGGA GAGTATCGGCTGTGTGCCACCAACGGCATGGTCGGCGGCCAAGGCGGCAACGGCGGCCCGGCGCTGGAGCGCAAG GACTCTTCGACGCTCATATCGCTCGCCGACTCATCTCAGCTCGAGGACACCACCATGACCGACGCCCGGCCGGCG AGCGACGACCCGGGCGACAGACTGGCCCCGGGCGCGTGA |
| Gene | >Hirsu2|143 ATGGAGCCAACCAGTAAGAAGCGAAAGTTGGCTCCGAAAGTCAACGCTTCTTCGGCCCCCAATTCTCAGCCTAGC CAGTACGCCCACGAAACGGTCAGCCTCGATCCCCCTTTCCCGCCCCCTTCCTCCAACCTCCGCCTCCTCTTCTTG CCTTGCGGGCCTCTCCGGCCGCTTGCTCGGATCTCGCTGAGCTGACCGACCAATTTCTGCAGACACCGCCGCAAT CGCAGCCCCAGCAGCAGCCGCCCTACGCCCTTCACGATGCCCCCCTCTTCGAGCGTCACGACTTCGAGTCCTTTG CCCGCCACCTCCAGGATGCGGCCATGCTGATCCAGCGCCAAACCGAACGGCCGCCATACGGGGACGTGTCGGTCC TGCTGCTGAACTGGCAGGACGACGTTGCCGTCCAAGAAGACCTGCTTGCCCTCGAACAAATTTTCCAGAAGCACT ACAATTTTGATACGCAGCGATGGCAGATCCCCACCGTCCCCAATCCCAGCATCAAGCTCGGCGTCCAAATGGCCT CCTTTCTCGAGCATGCGCGGCCCAATCATCTCCTGGTCATCTACTACGCCGGCCATGGCTACGTCGGCCCCGATA ACCAGCTCTACTGGGCCTGGTAAGCCGCCTCTTCGTGTCCCTGCCGTCACCCGGCCGCCGCGCCGGTCCGCCCGC TGAACCCAAGTCCTCCCAGCTCCGCTCGCGATGACGCGGCCAAGCTCAAGTGGGATGGCGTGCGCTGCTTGTTCG AGGATGCGCAGTCCGACATCCTCTTGCTGCTCGACACGTGCGCCATTCCTGACCCTGCCGCGGCCGGCAGCCACG GCGTGAAGCAGGCCATCGCCGCCTGTTCCCCGGAGCATGGTTTGCGGGGCGACTCGAGCCGCTCGTTCACGTCGA ACCTGGCCGAGGCCCTCCACAAGCTCAGCACCGGGAGGCCGTTCAGCGTGCAACGCCTGTACGACGAGGTGCTCT CGCAGAGGCAGCAGCATCTGGCTCAGGCGGCCCGCGTGCCCAACGGGGGCTCCAATCCTGCGCCCCACGCCCAGC TGCCCGTCTTCTTCACCCTCACCCCCGGCAAGGGCCAGAACCTGACGTTGGCCCCGCTCTCTTCCCGCGCGCTGT CGGCGTCATCCAAGAACGGCGGCGAGGCGGCTGACGCTCGCATCGTGCGAGGCCGAGAGGACCACTTCATCGACC CCGAGTCCGTTGCCGACCTCCGATTCGACGAGTCCAGGATCCTGGTCTGCACCACCTTTGTCGGCGACGCCAGCT CCGACATGTCCTTTTTCACCCAATGGCTCCAGAACACGCCCCCTCTGGGCAACAAGATAGCCGTCGAGGGCATGT TCCTCGGCCCCCCCACGATGCTCCTCATATCCATGCCTCACTCGATATGGAACGTCGTGCAGCACGACAAAGTCT GCTGCTTCCTCGGCTACATAAGCTCCCATAACATGCTCCACTTGTATGAGAAGCTGGTTGGACCCGCGGGTGTGA GGCCCTCCGCCAAGGAGGTCGAGGACGGCCGGATACTCTTGGAGGCGAGGGAGCTGGCCGCGGTGACGCCGGCGC GCGTGCGGAGAGAACACGACGGCCACGACCAGTCGTACCATGCCTCGGCGTCGTCGGAGCGCTCGGTACACGGCG ATCGACCGGAACACATCCCCCAGAGCAGCCCGCCGAGACCACCGTTTTCCGCGGTCGGTCCCGCCGCCGGGCCCA TCAAGCCCAAGGACGACGTCGAGGACTCGGCCGAGATGCAGGAGGCGGCGGAGCAACTCAAGGCCCTGAGCCACG TGCGCCATCGGAGCGACGAGACGATCCCAGCCGCCCAGCGCCCCCGCACCAGCCTGCCCAATGCCGTGCCGAACC CCCCGCGTGACGGCAACGCGCAGCCCGCCCCCGACGCGCCTCACACCGAGGCCGCCAACGACGAGGCCGCGGCGG CAGAGCCCAAGTCGGCCTCCAGCTCGCGCGCCAAGGCTCCTCGACGCTTCATCCCCAAGCAGGAGACGCGCTGCA ACCACTGCAGCCACGCGCCCTTCAAGGACTCGTCGTCTCTGCGCAAGCACATCGCGGCCGCGCACACGCGGCCCT TCCCTTGCGCCTTCTCATTCGCCGGCTGCACCAGCACCTTCGGGTCCAAGAACGAGTGGAAACGGCACATTGCGT CGCAGCACCTCTGCCTTCAGTACTACCGGTGTTCCGAGTGCCCGCAGGGCGCGGGCGAGGGTAAGGGCAACGAGT TCAACCGCAAGGATCTGTTCACGCAGCACCTGCGGCGCATGCACGCTCCCTTCCACGTCAAGAGGGCCATGTCCA AGGGCGAGACCAAGCTTCTGGCCGAGTGGGAGGAGACGGTCAAGAACATGCAGCAGTCGTGCCTCGTGACGCGGC GGCAGCCCCCGCAGAGGTCGGCCTGCCCCAAGCCCGGCTGCCAACACGAGTTCAACGGAGCCGGGTCCTGGGACG AGTGGACGGAGCACGTGGGGCGGCACATGGAGAAGAGCGAGGCACAGAGCCTCGGCGTGGATCCCCTGCTCGCGC AGTGGGCGCTCGACGAGGGCATCATCGAGGCCAAGGACGATGGAGAGTATCGGCTGTGTGCCACCAACGGCATGG TCGGCGGCCAAGGCGGCAACGGCGGCCCGGCGCTGGAGCGCAAGGACTCTTCGACGCTCATATCGCTCGCCGACT CATCTCAGCTCGAGGACACCACCATGACCGACGCCCGGCCGGCGAGCGACGACCCGGGCGACAGACTGGCCCCGG GCGCGTGA |