Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1417
Gene name
LocationContig_1309:6503..7376
Strand-
Gene length (bp)873
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00024 PAN_1 PAN domain 8.0E-05 180 238

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1417
MYGNGGFSTTKAERVHHAFVTLPPAKEAPLTQSRMCSTECPSAHGQLFVGVTGENYLMSCHHRHGTKYLRDDRRD
SFEACMTACAVMPECRSVDYEPRTKRCLYSTHADHPAIAAQAFLSAHSLGCAGACAGCKKGCDAVGKEPLPADAA
RCDKDDGQLMVAGGEQMRLRCNHCWHSANDSIRSLRDVKSLAECARRCGEDPYCHGANWMGAASGCHFHPQLDKD
GKAPSMKRSAACDSVTPLLRSLAEYKEEDIQDSGITQRDW*
Coding >Hirsu2|1417
ATGTACGGCAACGGCGGCTTCTCGACGACCAAGGCGGAACGAGTCCATCACGCCTTCGTGACGCTCCCCCCGGCC
AAGGAGGCGCCCCTGACGCAGTCGCGGATGTGCTCGACCGAGTGCCCGTCTGCGCACGGCCAGCTCTTCGTGGGC
GTGACCGGCGAGAACTACCTCATGTCGTGCCACCACCGCCACGGCACCAAGTACCTCCGGGACGACCGGCGCGAC
TCGTTCGAGGCCTGCATGACGGCGTGCGCGGTGATGCCCGAGTGCCGCAGCGTCGACTACGAGCCGCGCACGAAG
CGCTGCCTGTACAGCACGCACGCGGACCACCCGGCCATCGCGGCGCAGGCCTTCCTGAGCGCGCACTCGCTCGGC
TGCGCCGGCGCCTGCGCCGGCTGCAAGAAGGGCTGCGACGCGGTCGGCAAGGAGCCGCTGCCGGCGGACGCGGCG
CGCTGCGACAAGGACGACGGCCAGCTGATGGTCGCGGGCGGCGAGCAGATGCGGCTGCGCTGCAACCACTGCTGG
CACAGCGCCAACGACTCGATCCGCTCCCTCCGCGACGTCAAGAGCCTGGCCGAGTGCGCCCGCCGCTGCGGCGAG
GACCCCTACTGCCACGGCGCCAACTGGATGGGCGCCGCCAGCGGCTGCCACTTCCACCCGCAGCTGGACAAGGAC
GGCAAGGCGCCGTCCATGAAGAGGAGCGCTGCCTGCGATTCCGTCACGCCCCTGCTCCGGAGCCTGGCCGAGTAC
AAGGAGGAGGACATCCAGGACTCCGGCATCACGCAGAGGGACTGGTAG
Transcript >Hirsu2|1417
ATGTACGGCAACGGCGGCTTCTCGACGACCAAGGCGGAACGAGTCCATCACGCCTTCGTGACGCTCCCCCCGGCC
AAGGAGGCGCCCCTGACGCAGTCGCGGATGTGCTCGACCGAGTGCCCGTCTGCGCACGGCCAGCTCTTCGTGGGC
GTGACCGGCGAGAACTACCTCATGTCGTGCCACCACCGCCACGGCACCAAGTACCTCCGGGACGACCGGCGCGAC
TCGTTCGAGGCCTGCATGACGGCGTGCGCGGTGATGCCCGAGTGCCGCAGCGTCGACTACGAGCCGCGCACGAAG
CGCTGCCTGTACAGCACGCACGCGGACCACCCGGCCATCGCGGCGCAGGCCTTCCTGAGCGCGCACTCGCTCGGC
TGCGCCGGCGCCTGCGCCGGCTGCAAGAAGGGCTGCGACGCGGTCGGCAAGGAGCCGCTGCCGGCGGACGCGGCG
CGCTGCGACAAGGACGACGGCCAGCTGATGGTCGCGGGCGGCGAGCAGATGCGGCTGCGCTGCAACCACTGCTGG
CACAGCGCCAACGACTCGATCCGCTCCCTCCGCGACGTCAAGAGCCTGGCCGAGTGCGCCCGCCGCTGCGGCGAG
GACCCCTACTGCCACGGCGCCAACTGGATGGGCGCCGCCAGCGGCTGCCACTTCCACCCGCAGCTGGACAAGGAC
GGCAAGGCGCCGTCCATGAAGAGGAGCGCTGCCTGCGATTCCGTCACGCCCCTGCTCCGGAGCCTGGCCGAGTAC
AAGGAGGAGGACATCCAGGACTCCGGCATCACGCAGAGGGACTGGTAG
Gene >Hirsu2|1417
ATGTACGGCAACGGCGGCTTCTCGACGACCAAGGCGGAACGAGTCCATCACGCCTTCGTGACGCTCCCCCCGGCC
AAGGAGGCGCCCCTGACGCAGTCGCGGATGTGCTCGACCGAGTGCCCGTCTGCGCACGGCCAGCTCTTCGTGGGC
GTGACCGGCGAGGTCAGTGATCCAGCTTGAACGGTATAACCAAACCCGTGCCTGGCCGGGACTGACACCTTGACG
TCGGCACGCCAGAACTACCTCATGTCGTGCCACCACCGCCACGGCACCAAGTACCTCCGGGACGACCGGCGCGAC
TCGTTCGAGGCCTGCATGACGGCGTGCGCGGTGATGCCCGAGTGCCGCAGCGTCGACTACGAGCCGCGCACGAAG
CGCTGCCTGTACAGCACGCACGCGGACCACCCGGCCATCGCGGCGCAGGCCTTCCTGAGCGCGCACTCGCTCGGC
TGCGCCGGCGCCTGCGCCGGCTGCAAGAAGGGCTGCGACGCGGTCGGCAAGGAGCCGCTGCCGGCGGACGCGGCG
CGCTGCGACAAGGACGACGGCCAGCTGATGGTCGCGGGCGGCGAGCAGATGCGGCTGCGCTGCAACCACTGCTGG
CACAGCGCCAACGACTCGATCCGCTCCCTCCGCGACGTCAAGAGCCTGGCCGAGTGCGCCCGCCGCTGCGGCGAG
GACCCCTACTGCCACGGCGCCAACTGGATGGGCGCCGCCAGCGGCTGCCACTTCCACCCGCAGCTGGACAAGGAC
GGCAAGGCGCCGTCCATGAAGAGGAGCGCTGCCTGCGATTCCGTCACGCCCCTGCTCCGGAGCCTGGCCGAGTAC
AAGGAGGAGGACATCCAGGACTCCGGCATCACGCAGAGGGACTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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