© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|141 |
| Gene name | |
| Location | Contig_1021:4553..5465 |
| Strand | + |
| Gene length (bp) | 912 |
| Transcript length (bp) | 912 |
| Coding sequence length (bp) | 912 |
| Protein length (aa) | 304 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.4483 | 0.6225 | 0.0748 | 0.1014 | 0.1974 | 0.2969 | 0.0207 | 0.0142 | 0.025 | 0.0117 |
| Orthofinder run ID | 4 |
| Orthogroup | 708 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|141 MKSFSSQISRKPPRLTLDGLRRALELYGNIALLRRSLTSNTTAFDTWRATNSADYQAFIERLTSEGFDPVDGLAI DGFYFTKPDHPSSRAERFKKLTQKDRPASSGHGPAHGQPLSQADGLLSKTGGSKAGRNKSPRHRKPRGKNGRFKP TSMPGSNEITLPATLRGLVGNVFPLPNQPWRNAQGAIQIAVIMADIVGQIRDGKIKADDPAVGEIMAVVEKQECL AAHMRAVDDLAASEGSTTPGPARPVFGAGLRRIGQPAVIDLTSDGPDLKPKPSRPSLWADLPSRQNPERPGRRAA QEK* |
| Coding | >Hirsu2|141 ATGAAATCATTCTCCTCGCAAATCTCCCGCAAACCACCGCGCCTCACTCTTGACGGGCTCCGCCGCGCTTTAGAG CTCTACGGAAACATCGCACTGCTCCGCCGTAGCCTCACGAGCAACACGACGGCTTTCGACACTTGGAGAGCTACG AATTCCGCCGACTACCAGGCCTTCATCGAGCGGCTGACATCTGAGGGTTTCGACCCTGTAGACGGCCTGGCAATT GACGGCTTCTACTTCACGAAGCCAGACCACCCGTCTAGCAGGGCCGAGCGATTCAAAAAGCTCACCCAAAAGGAC CGTCCCGCTTCTTCTGGACACGGCCCTGCCCACGGGCAGCCGCTCTCCCAAGCCGACGGGCTTCTCTCAAAAACT GGCGGTTCCAAGGCGGGCCGCAACAAGTCCCCAAGGCACAGAAAGCCAAGAGGCAAGAACGGGCGGTTCAAGCCC ACCTCGATGCCAGGTTCAAATGAAATCACCTTGCCCGCTACGTTACGCGGGCTCGTTGGCAACGTTTTCCCGTTG CCGAACCAGCCGTGGCGGAACGCCCAAGGGGCGATACAAATCGCCGTCATCATGGCCGACATCGTGGGCCAGATC AGAGACGGCAAGATCAAAGCTGACGATCCTGCCGTAGGCGAGATCATGGCCGTGGTGGAGAAACAGGAATGCCTT GCTGCTCATATGCGCGCAGTCGATGACCTCGCCGCCTCGGAGGGCAGCACGACTCCCGGACCGGCCAGGCCGGTG TTCGGCGCCGGCCTGCGCCGCATAGGCCAGCCGGCCGTCATTGATCTCACAAGCGACGGCCCGGACTTAAAACCA AAGCCCTCCCGCCCCAGTTTGTGGGCCGACCTCCCGTCTCGCCAGAACCCGGAGCGGCCCGGCCGTCGCGCCGCG CAGGAGAAATAA |
| Transcript | >Hirsu2|141 ATGAAATCATTCTCCTCGCAAATCTCCCGCAAACCACCGCGCCTCACTCTTGACGGGCTCCGCCGCGCTTTAGAG CTCTACGGAAACATCGCACTGCTCCGCCGTAGCCTCACGAGCAACACGACGGCTTTCGACACTTGGAGAGCTACG AATTCCGCCGACTACCAGGCCTTCATCGAGCGGCTGACATCTGAGGGTTTCGACCCTGTAGACGGCCTGGCAATT GACGGCTTCTACTTCACGAAGCCAGACCACCCGTCTAGCAGGGCCGAGCGATTCAAAAAGCTCACCCAAAAGGAC CGTCCCGCTTCTTCTGGACACGGCCCTGCCCACGGGCAGCCGCTCTCCCAAGCCGACGGGCTTCTCTCAAAAACT GGCGGTTCCAAGGCGGGCCGCAACAAGTCCCCAAGGCACAGAAAGCCAAGAGGCAAGAACGGGCGGTTCAAGCCC ACCTCGATGCCAGGTTCAAATGAAATCACCTTGCCCGCTACGTTACGCGGGCTCGTTGGCAACGTTTTCCCGTTG CCGAACCAGCCGTGGCGGAACGCCCAAGGGGCGATACAAATCGCCGTCATCATGGCCGACATCGTGGGCCAGATC AGAGACGGCAAGATCAAAGCTGACGATCCTGCCGTAGGCGAGATCATGGCCGTGGTGGAGAAACAGGAATGCCTT GCTGCTCATATGCGCGCAGTCGATGACCTCGCCGCCTCGGAGGGCAGCACGACTCCCGGACCGGCCAGGCCGGTG TTCGGCGCCGGCCTGCGCCGCATAGGCCAGCCGGCCGTCATTGATCTCACAAGCGACGGCCCGGACTTAAAACCA AAGCCCTCCCGCCCCAGTTTGTGGGCCGACCTCCCGTCTCGCCAGAACCCGGAGCGGCCCGGCCGTCGCGCCGCG CAGGAGAAATAA |
| Gene | >Hirsu2|141 ATGAAATCATTCTCCTCGCAAATCTCCCGCAAACCACCGCGCCTCACTCTTGACGGGCTCCGCCGCGCTTTAGAG CTCTACGGAAACATCGCACTGCTCCGCCGTAGCCTCACGAGCAACACGACGGCTTTCGACACTTGGAGAGCTACG AATTCCGCCGACTACCAGGCCTTCATCGAGCGGCTGACATCTGAGGGTTTCGACCCTGTAGACGGCCTGGCAATT GACGGCTTCTACTTCACGAAGCCAGACCACCCGTCTAGCAGGGCCGAGCGATTCAAAAAGCTCACCCAAAAGGAC CGTCCCGCTTCTTCTGGACACGGCCCTGCCCACGGGCAGCCGCTCTCCCAAGCCGACGGGCTTCTCTCAAAAACT GGCGGTTCCAAGGCGGGCCGCAACAAGTCCCCAAGGCACAGAAAGCCAAGAGGCAAGAACGGGCGGTTCAAGCCC ACCTCGATGCCAGGTTCAAATGAAATCACCTTGCCCGCTACGTTACGCGGGCTCGTTGGCAACGTTTTCCCGTTG CCGAACCAGCCGTGGCGGAACGCCCAAGGGGCGATACAAATCGCCGTCATCATGGCCGACATCGTGGGCCAGATC AGAGACGGCAAGATCAAAGCTGACGATCCTGCCGTAGGCGAGATCATGGCCGTGGTGGAGAAACAGGAATGCCTT GCTGCTCATATGCGCGCAGTCGATGACCTCGCCGCCTCGGAGGGCAGCACGACTCCCGGACCGGCCAGGCCGGTG TTCGGCGCCGGCCTGCGCCGCATAGGCCAGCCGGCCGTCATTGATCTCACAAGCGACGGCCCGGACTTAAAACCA AAGCCCTCCCGCCCCAGTTTGTGGGCCGACCTCCCGTCTCGCCAGAACCCGGAGCGGCCCGGCCGTCGCGCCGCG CAGGAGAAATAA |