Protein ID | Hirsu2|1386 |
Gene name | |
Location | Contig_130:23186..24993 |
Strand | + |
Gene length (bp) | 1807 |
Transcript length (bp) | 1620 |
Coding sequence length (bp) | 1620 |
Protein length (aa) | 540 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF19287 | DUF5910 | Family of unknown function (DUF5910) | 1.9E-21 | 62 | 167 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 23 | 18 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1386 MVCRVLSLLFALATIAGVIGAPVKAGRAVIGYRRVNPEQAKRYSDAGTITDDPTGNGGEQIGHGVYTSAITAEKD VWDKLPKTWIPRSEWWKNDDVDAYIKTVDSSLKPEDTVRLALIDKIPEEQLQMLLPKALLKNQDLRIETKCGNDI QDSPPVDYGTWGNIKGNRFTRSETKAREVIQEILDSVVKIKAANEKVKDAKTPEEIETLSKEAKENLDKAKESTE KLAKVIEGARGVKELAVAEGAKQACKDCTMDHKTYQNGFSAYREARREHASFVVKSAERGLSLVAGPGSGAENTG SAKALKDLAARVEKEVESKRRNKQLIKDELDEYEKQTKERLNSKDIGKVPPNPPESGAENIFVTVSGRVRALNDE LGVLENELAILDGEDGVLRKLCKGPNSGCKAQSNPETDEDEPPRFYGNKKKGTSSMADKEQDDDDDEPPIFDPKN KKAASSRADEETGRDGDDESEAGRKKKKASSNGSDEEEDEDDPPDFDVGSGGGQPTADNPDNSDEDSDGRRKAKK KGSGKTRTRVDSGN* |
Coding | >Hirsu2|1386 ATGGTTTGCAGGGTTCTTTCGTTGCTCTTTGCTCTTGCTACCATTGCAGGGGTAATCGGCGCCCCTGTCAAGGCC GGACGTGCAGTCATCGGCTACAGACGCGTGAATCCGGAACAAGCCAAGAGATACAGCGATGCTGGCACCATCACT GATGATCCCACGGGAAATGGCGGCGAGCAGATCGGCCATGGCGTTTACACCTCGGCCATAACGGCCGAGAAGGAC GTCTGGGACAAGCTGCCCAAAACGTGGATTCCCCGGAGCGAGTGGTGGAAGAACGATGACGTTGACGCGTACATC AAAACGGTCGACAGCAGCTTGAAACCAGAAGATACTGTGCGCTTGGCCTTGATTGACAAGATCCCAGAGGAACAG CTTCAGATGCTCCTCCCCAAGGCTTTACTCAAGAATCAAGACCTACGGATAGAAACCAAGTGTGGAAACGACATT CAAGACTCGCCGCCCGTCGACTACGGCACCTGGGGCAACATCAAGGGCAACAGGTTCACCCGATCGGAGACAAAA GCAAGGGAGGTGATTCAAGAAATCCTGGACTCGGTGGTGAAGATCAAGGCGGCCAACGAAAAGGTCAAGGACGCC AAAACACCGGAGGAGATCGAAACTCTAAGCAAAGAGGCCAAGGAGAATCTCGACAAGGCCAAAGAATCGACAGAG AAGCTGGCCAAGGTCATAGAAGGCGCGAGGGGTGTGAAAGAGCTCGCAGTCGCCGAGGGGGCAAAGCAGGCCTGC AAAGACTGCACCATGGACCACAAGACTTACCAGAACGGTTTCAGCGCATATAGAGAGGCCAGAAGGGAGCACGCC TCATTCGTCGTGAAAAGCGCCGAGAGGGGTCTGAGCCTGGTCGCGGGCCCAGGTTCGGGCGCCGAGAATACAGGC TCGGCCAAAGCTTTGAAGGATCTGGCTGCTAGAGTGGAGAAGGAAGTCGAGTCGAAAAGGCGGAATAAGCAGCTC ATCAAAGACGAACTCGACGAATATGAAAAACAGACGAAAGAAAGGCTGAACAGTAAGGATATAGGCAAGGTGCCT CCAAACCCGCCCGAGTCGGGAGCAGAAAACATCTTCGTCACGGTCTCTGGCCGAGTCCGGGCCCTGAACGACGAG TTGGGGGTGCTTGAAAACGAATTGGCCATTCTGGATGGTGAAGACGGCGTGCTGAGGAAGTTGTGCAAGGGGCCC AACTCTGGGTGCAAGGCGCAAAGTAACCCCGAGACTGACGAGGACGAGCCACCGCGTTTCTATGGGAACAAAAAG AAGGGGACCTCGAGTATGGCCGACAAAGAGCAAGACGACGACGACGACGAACCACCGATATTCGACCCGAAGAAC AAGAAAGCGGCGTCGAGTAGGGCCGATGAAGAGACCGGGAGGGACGGCGACGACGAGTCGGAGGCCGGCCGAAAG AAAAAGAAAGCGAGCTCGAATGGGTCCGATGAGGAAGAAGACGAGGACGATCCACCCGACTTTGATGTTGGTAGC GGGGGAGGCCAGCCGACTGCGGACAACCCAGACAACTCCGACGAAGACTCGGATGGTCGAAGGAAAGCAAAGAAG AAGGGCTCCGGCAAGACACGGACGAGGGTGGATTCAGGAAACTAG |
Transcript | >Hirsu2|1386 ATGGTTTGCAGGGTTCTTTCGTTGCTCTTTGCTCTTGCTACCATTGCAGGGGTAATCGGCGCCCCTGTCAAGGCC GGACGTGCAGTCATCGGCTACAGACGCGTGAATCCGGAACAAGCCAAGAGATACAGCGATGCTGGCACCATCACT GATGATCCCACGGGAAATGGCGGCGAGCAGATCGGCCATGGCGTTTACACCTCGGCCATAACGGCCGAGAAGGAC GTCTGGGACAAGCTGCCCAAAACGTGGATTCCCCGGAGCGAGTGGTGGAAGAACGATGACGTTGACGCGTACATC AAAACGGTCGACAGCAGCTTGAAACCAGAAGATACTGTGCGCTTGGCCTTGATTGACAAGATCCCAGAGGAACAG CTTCAGATGCTCCTCCCCAAGGCTTTACTCAAGAATCAAGACCTACGGATAGAAACCAAGTGTGGAAACGACATT CAAGACTCGCCGCCCGTCGACTACGGCACCTGGGGCAACATCAAGGGCAACAGGTTCACCCGATCGGAGACAAAA GCAAGGGAGGTGATTCAAGAAATCCTGGACTCGGTGGTGAAGATCAAGGCGGCCAACGAAAAGGTCAAGGACGCC AAAACACCGGAGGAGATCGAAACTCTAAGCAAAGAGGCCAAGGAGAATCTCGACAAGGCCAAAGAATCGACAGAG AAGCTGGCCAAGGTCATAGAAGGCGCGAGGGGTGTGAAAGAGCTCGCAGTCGCCGAGGGGGCAAAGCAGGCCTGC AAAGACTGCACCATGGACCACAAGACTTACCAGAACGGTTTCAGCGCATATAGAGAGGCCAGAAGGGAGCACGCC TCATTCGTCGTGAAAAGCGCCGAGAGGGGTCTGAGCCTGGTCGCGGGCCCAGGTTCGGGCGCCGAGAATACAGGC TCGGCCAAAGCTTTGAAGGATCTGGCTGCTAGAGTGGAGAAGGAAGTCGAGTCGAAAAGGCGGAATAAGCAGCTC ATCAAAGACGAACTCGACGAATATGAAAAACAGACGAAAGAAAGGCTGAACAGTAAGGATATAGGCAAGGTGCCT CCAAACCCGCCCGAGTCGGGAGCAGAAAACATCTTCGTCACGGTCTCTGGCCGAGTCCGGGCCCTGAACGACGAG TTGGGGGTGCTTGAAAACGAATTGGCCATTCTGGATGGTGAAGACGGCGTGCTGAGGAAGTTGTGCAAGGGGCCC AACTCTGGGTGCAAGGCGCAAAGTAACCCCGAGACTGACGAGGACGAGCCACCGCGTTTCTATGGGAACAAAAAG AAGGGGACCTCGAGTATGGCCGACAAAGAGCAAGACGACGACGACGACGAACCACCGATATTCGACCCGAAGAAC AAGAAAGCGGCGTCGAGTAGGGCCGATGAAGAGACCGGGAGGGACGGCGACGACGAGTCGGAGGCCGGCCGAAAG AAAAAGAAAGCGAGCTCGAATGGGTCCGATGAGGAAGAAGACGAGGACGATCCACCCGACTTTGATGTTGGTAGC GGGGGAGGCCAGCCGACTGCGGACAACCCAGACAACTCCGACGAAGACTCGGATGGTCGAAGGAAAGCAAAGAAG AAGGGCTCCGGCAAGACACGGACGAGGGTGGATTCAGGAAACTAG |
Gene | >Hirsu2|1386 ATGGTTTGCAGGGTTCTTTCGTTGCTCTTTGCTCTTGCTACCATTGCAGGGGTAATCGGCGCCCCTGTCAAGGCC GGACGTGCAGTCATCGGCTACAGACGCGTGAATCCGGTACGAAAACGGTGTCCTGGGGATGTTTGGCAAGAATGA TGACTGAATTCGAGAAACTTTAGGAACAAGCCAAGAGATACAGCGATGCTGGCACCATCACTGATGATCCCACGG GAAATGGCGGCGAGCAGATCGGCCATGGCGTTTACACCTCGGCCGTGCGAGGGGCGTGGAAAGGATCTCCTGGAG ATGTGTTAGTATCTGCCCATGTACACTTGTACAGCCCTTTGTGATTTTGGGGACGACCTTTTGATTTAATTGCGC GCGTTGCAGGGACTGTCAGATAACGGCCGAGAAGGACGTCTGGGACAAGCTGCCCAAAACGTGGATTCCCCGGAG CGAGTGGTGGAAGAACGATGACGTTGACGCGTACATCAAAACGGTCGACAGCAGCTTGAAACCAGAAGATACTGT GCGCTTGGCCTTGATTGACAAGATCCCAGAGGAACAGCTTCAGATGCTCCTCCCCAAGGCTTTACTCAAGAATCA AGACCTACGGATAGAAACCAAGTGTGGAAACGACATTCAAGACTCGCCGCCCGTCGACTACGGCACCTGGGGCAA CATCAAGGGCAACAGGTTCACCCGATCGGAGACAAAAGCAAGGGAGGTGATTCAAGAAATCCTGGACTCGGTGGT GAAGATCAAGGCGGCCAACGAAAAGGTCAAGGACGCCAAAACACCGGAGGAGATCGAAACTCTAAGCAAAGAGGC CAAGGAGAATCTCGACAAGGCCAAAGAATCGACAGAGAAGCTGGCCAAGGTCATAGAAGGCGCGAGGGGTGTGAA AGAGCTCGCAGTCGCCGAGGGGGCAAAGCAGGCCTGCAAAGACTGCACCATGGACCACAAGACTTACCAGAACGG TTTCAGCGCATATAGAGAGGCCAGAAGGGAGCACGCCTCATTCGTCGTGAAAAGCGCCGAGAGGGGTCTGAGCCT GGTCGCGGGCCCAGGTTCGGGCGCCGAGAATACAGGCTCGGCCAAAGCTTTGAAGGATCTGGCTGCTAGAGTGGA GAAGGAAGTCGAGTCGAAAAGGCGGAATAAGCAGCTCATCAAAGACGAACTCGACGAATATGAAAAACAGACGAA AGAAAGGCTGAACAGTAAGGATATAGGCAAGGTGCCTCCAAACCCGCCCGAGTCGGGAGCAGAAAACATCTTCGT CACGGTCTCTGGCCGAGTCCGGGCCCTGAACGACGAGTTGGGGGTGCTTGAAAACGAATTGGCCATTCTGGATGG TGAAGACGGCGTGCTGAGGAAGTTGTGCAAGGGGCCCAACTCTGGGTGCAAGGCGCAAAGTAACCCCGAGACTGA CGAGGACGAGCCACCGCGTTTCTATGGGAACAAAAAGAAGGGGACCTCGAGTATGGCCGACAAAGAGCAAGACGA CGACGACGACGAACCACCGATATTCGACCCGAAGAACAAGAAAGCGGCGTCGAGTAGGGCCGATGAAGAGACCGG GAGGGACGGCGACGACGAGTCGGAGGCCGGCCGAAAGAAAAAGAAAGCGAGCTCGAATGGGTCCGATGAGGAAGA AGACGAGGACGATCCACCCGACTTTGATGTTGGTAGCGGGGGAGGCCAGCCGACTGCGGACAACCCAGACAACTC CGACGAAGACTCGGATGGTCGAAGGAAAGCAAAGAAGAAGGGCTCCGGCAAGACACGGACGAGGGTGGATTCAGG AAACTAG |