Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1380
Gene name
LocationContig_130:2587..3818
Strand+
Gene length (bp)1231
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1380
MLPLKAHRRLRTGRAVGLLVFVCAVWLLLTSSPLVRRAGRMDDGFVASSSNATLGFGRIYVVSQQGSPRRRSIVQ
AANVTELQLSIPVQPVWTDDDERRFRLARDSSIRRGSLLAWLGHLHALQRFLDSGAETALFLEDDVDWDIRLRTT
QAPLVSSAARRLLGRASAGLDPQLYPYGDPASWDLLYLGHCGDYWHGMDIDFVDGHVTPGDLEATPHTAFADPSM
LPPDSLHPFTTSLLKNLGVGDRTRLLHRSVFPLCTFGYALSRAGARRLLELGAREPSGRGHKAYDVLVLLSCRDY
GLRCWTVNPELFHHVPGPSIIDLQQGNNELPPVDRAAKDQIEARRETPNIDCGFWDGAFSFDDDDAARLDWLRQE
VGRNGRCLKTGRQLHD*
Coding >Hirsu2|1380
ATGCTGCCGCTCAAAGCGCACCGGCGGCTGCGCACCGGCCGGGCCGTCGGCCTGCTCGTCTTCGTCTGCGCCGTC
TGGCTGCTCCTGACGTCGAGCCCGCTCGTGCGCAGGGCCGGCCGGATGGACGACGGCTTCGTGGCGTCCAGCAGC
AATGCCACGCTCGGCTTCGGCCGCATATACGTCGTGTCCCAGCAGGGCTCGCCGCGCCGCAGGAGCATCGTCCAG
GCCGCCAACGTCACCGAGCTGCAGCTGAGCATCCCCGTGCAGCCCGTCTGGACCGACGACGACGAGCGCCGCTTC
AGGCTGGCCCGGGATTCGTCCATCCGCAGGGGCTCGCTGCTCGCCTGGCTCGGCCACCTGCACGCTCTGCAGCGC
TTCCTCGACTCCGGCGCCGAGACGGCCCTGTTCCTCGAGGACGACGTCGACTGGGACATCCGCCTCCGCACGACG
CAGGCGCCGCTCGTCTCCTCGGCCGCCCGCCGGCTCCTCGGCCGCGCCTCGGCCGGCCTCGACCCGCAGCTGTAC
CCGTACGGCGATCCGGCGAGCTGGGACCTGCTCTACCTCGGCCACTGCGGCGACTACTGGCACGGCATGGACATC
GACTTCGTCGACGGCCACGTCACGCCCGGCGACCTCGAGGCGACGCCGCACACGGCCTTCGCCGACCCGTCCATG
CTGCCGCCCGACAGCCTGCACCCCTTCACCACGTCCCTGCTCAAGAACCTGGGCGTCGGCGACCGGACCCGGCTC
CTGCACCGGTCTGTCTTCCCGCTGTGCACCTTCGGCTACGCCCTCTCCCGCGCCGGCGCCCGCCGCCTGCTCGAG
CTCGGCGCCCGGGAGCCGTCCGGGCGCGGACACAAGGCCTACGACGTCCTGGTCCTGCTCAGCTGCCGCGACTAC
GGCCTGCGCTGCTGGACCGTCAACCCGGAGCTCTTCCACCACGTGCCCGGGCCCAGCATCATCGACCTCCAGCAG
GGCAACAACGAGCTGCCGCCCGTCGACCGCGCCGCCAAGGACCAGATCGAGGCCCGCCGCGAGACGCCCAACATC
GACTGCGGCTTCTGGGACGGTGCCTTCAGCTTCGACGACGACGACGCCGCCCGCCTCGACTGGCTTCGTCAGGAG
GTCGGCAGGAACGGGAGGTGTCTGAAGACGGGACGCCAGTTGCACGACTGA
Transcript >Hirsu2|1380
ATGCTGCCGCTCAAAGCGCACCGGCGGCTGCGCACCGGCCGGGCCGTCGGCCTGCTCGTCTTCGTCTGCGCCGTC
TGGCTGCTCCTGACGTCGAGCCCGCTCGTGCGCAGGGCCGGCCGGATGGACGACGGCTTCGTGGCGTCCAGCAGC
AATGCCACGCTCGGCTTCGGCCGCATATACGTCGTGTCCCAGCAGGGCTCGCCGCGCCGCAGGAGCATCGTCCAG
GCCGCCAACGTCACCGAGCTGCAGCTGAGCATCCCCGTGCAGCCCGTCTGGACCGACGACGACGAGCGCCGCTTC
AGGCTGGCCCGGGATTCGTCCATCCGCAGGGGCTCGCTGCTCGCCTGGCTCGGCCACCTGCACGCTCTGCAGCGC
TTCCTCGACTCCGGCGCCGAGACGGCCCTGTTCCTCGAGGACGACGTCGACTGGGACATCCGCCTCCGCACGACG
CAGGCGCCGCTCGTCTCCTCGGCCGCCCGCCGGCTCCTCGGCCGCGCCTCGGCCGGCCTCGACCCGCAGCTGTAC
CCGTACGGCGATCCGGCGAGCTGGGACCTGCTCTACCTCGGCCACTGCGGCGACTACTGGCACGGCATGGACATC
GACTTCGTCGACGGCCACGTCACGCCCGGCGACCTCGAGGCGACGCCGCACACGGCCTTCGCCGACCCGTCCATG
CTGCCGCCCGACAGCCTGCACCCCTTCACCACGTCCCTGCTCAAGAACCTGGGCGTCGGCGACCGGACCCGGCTC
CTGCACCGGTCTGTCTTCCCGCTGTGCACCTTCGGCTACGCCCTCTCCCGCGCCGGCGCCCGCCGCCTGCTCGAG
CTCGGCGCCCGGGAGCCGTCCGGGCGCGGACACAAGGCCTACGACGTCCTGGTCCTGCTCAGCTGCCGCGACTAC
GGCCTGCGCTGCTGGACCGTCAACCCGGAGCTCTTCCACCACGTGCCCGGGCCCAGCATCATCGACCTCCAGCAG
GGCAACAACGAGCTGCCGCCCGTCGACCGCGCCGCCAAGGACCAGATCGAGGCCCGCCGCGAGACGCCCAACATC
GACTGCGGCTTCTGGGACGGTGCCTTCAGCTTCGACGACGACGACGCCGCCCGCCTCGACTGGCTTCGTCAGGAG
GTCGGCAGGAACGGGAGGTGTCTGAAGACGGGACGCCAGTTGCACGACTGA
Gene >Hirsu2|1380
ATGCTGCCGCTCAAAGCGCACCGGCGGCTGCGCACCGGCCGGGCCGTCGGCCTGCTCGTCTTCGTCTGCGCCGTC
TGGCTGCTCCTGACGTCGAGCCCGCTCGTGCGCAGGGCCGGCCGGATGGACGACGGCTTCGTGGCGTCCAGCAGC
AATGCCACGCTCGGCTTCGGCCGCATATACGTCGTGTCCCAGCAGGGCTCGCCGCGCCGCAGGAGCATCGTCCAG
GCCGCCAACGTCACCGAGCTGCAGCTGAGCATCCCCGTGCAGCCCGTCTGGACCGACGACGACGAGCGCCGCTTC
AGGCTGGCCCGGGATTCGTCCATCCGCAGGGGCTCGCTGCTCGCCTGGCTCGGCCACCTGCACGCTCTGCAGCGG
TATGTTTTGATTTGCCTGCCTCGGATCGACCTCTGACCTGTCTTGCGCACGCAGCTTCCTCGACTCCGGCGCCGA
GACGGCCCTGTTCCTCGAGGACGACGTCGACTGGGACATCCGCCTCCGCACGACGCAGGCGCCGCTCGTCTCCTC
GGCCGCCCGCCGGCTCCTCGGCCGCGCCTCGGCCGGCCTCGACCCGCAGCTGTACCCGTACGGCGATCCGGCGAG
CTGGGACCTGCTCTACCTCGGCCACTGCGGCGACTACTGGCACGGCATGGACATCGACTTCGTCGACGGCCACGT
CACGCCCGGCGACCTCGAGGCGACGCCGCACACGGCCTTCGCCGACCCGTCCATGCTGCCGCCCGACAGCCTGCA
CCCCTTCACCACGTCCCTGCTCAAGAACCTGGGCGTCGGCGACCGGACCCGGCTCCTGCACCGGTCTGTCTTCCC
GCTGTGCACCTTCGGCTACGCCCTCTCCCGCGCCGGCGCCCGCCGCCTGCTCGAGCTCGGCGCCCGGGAGCCGTC
CGGGCGCGGACACAAGGCCTACGACGTCCTGGTCCTGCTCAGCTGCCGCGACTACGGCCTGCGCTGCTGGACCGT
CAACCCGGAGCTCTTCCACCACGTGCCCGGGCCCAGCATCATCGACCTCCAGCAGGGCAACAACGAGCTGCCGCC
CGTCGACCGCGCCGCCAAGGACCAGATCGAGGCCCGCCGCGAGACGCCCAACATCGACTGCGGCTTCTGGGACGG
TGCCTTCAGCTTCGACGACGACGACGCCGCCCGCCTCGACTGGCTTCGTCAGGAGGTCGGCAGGAACGGGAGGTG
TCTGAAGACGGGACGCCAGTTGCACGACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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