Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1375
Gene name
LocationContig_13:64815..65145
Strand-
Gene length (bp)330
Transcript length (bp)330
Coding sequence length (bp)330
Protein length (aa) 110

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2038 0.1089 0.6895 0.171 0.1296 0.0216 0.5197 0.3947 0.4189 0.0447

SignalP

SignalP signal predicted Location Score
Yes 1 - 26 0.999744

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8789
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1375 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1375
MKELKFLLAIWASLLLLLLGSNQCLGLLGRGAQLQAQDTLHYAEKSVLPPSLEELEDTLKRVIKILKHNREFSKS
KVAVVGGMACGITFRTAERLLCNTLVPCFERLSG*
Coding >Hirsu2|1375
ATGAAGGAACTGAAGTTTCTTCTGGCCATATGGGCCAGCCTTTTGTTGCTGCTCCTGGGGTCCAACCAGTGTCTG
GGCCTACTAGGCCGGGGTGCGCAGCTGCAGGCACAAGACACCCTGCATTATGCAGAAAAGAGCGTCCTTCCGCCC
TCACTCGAAGAGCTCGAAGATACACTCAAAAGGGTTATCAAGATCCTCAAGCACAACAGGGAGTTCTCCAAGAGT
AAAGTCGCCGTGGTTGGTGGCATGGCCTGTGGCATTACATTCCGGACGGCAGAGCGACTCCTGTGCAACACTCTG
GTGCCCTGCTTTGAGCGTCTATCCGGCTGA
Transcript >Hirsu2|1375
ATGAAGGAACTGAAGTTTCTTCTGGCCATATGGGCCAGCCTTTTGTTGCTGCTCCTGGGGTCCAACCAGTGTCTG
GGCCTACTAGGCCGGGGTGCGCAGCTGCAGGCACAAGACACCCTGCATTATGCAGAAAAGAGCGTCCTTCCGCCC
TCACTCGAAGAGCTCGAAGATACACTCAAAAGGGTTATCAAGATCCTCAAGCACAACAGGGAGTTCTCCAAGAGT
AAAGTCGCCGTGGTTGGTGGCATGGCCTGTGGCATTACATTCCGGACGGCAGAGCGACTCCTGTGCAACACTCTG
GTGCCCTGCTTTGAGCGTCTATCCGGCTGA
Gene >Hirsu2|1375
ATGAAGGAACTGAAGTTTCTTCTGGCCATATGGGCCAGCCTTTTGTTGCTGCTCCTGGGGTCCAACCAGTGTCTG
GGCCTACTAGGCCGGGGTGCGCAGCTGCAGGCACAAGACACCCTGCATTATGCAGAAAAGAGCGTCCTTCCGCCC
TCACTCGAAGAGCTCGAAGATACACTCAAAAGGGTTATCAAGATCCTCAAGCACAACAGGGAGTTCTCCAAGAGT
AAAGTCGCCGTGGTTGGTGGCATGGCCTGTGGCATTACATTCCGGACGGCAGAGCGACTCCTGTGCAACACTCTG
GTGCCCTGCTTTGAGCGTCTATCCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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