© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1371 |
| Gene name | |
| Location | Contig_13:52529..53105 |
| Strand | - |
| Gene length (bp) | 576 |
| Transcript length (bp) | 576 |
| Coding sequence length (bp) | 576 |
| Protein length (aa) | 192 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q01301|CCG4_NEUCR | Clock-controlled pheromone ccg-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-4 PE=2 SV=2 | 1 | 176 | 3.0E-10 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0676 | 0.0471 | 0.9521 | 0.0534 | 0.0458 | 0.0081 | 0.0715 | 0.0575 | 0.054 | 0.0016 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.999736 |
| Orthofinder run ID | 4 |
| Orthogroup | 6034 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1371 MKFALAIAVVSAVGVLAAPHPSPSPWCFRRYAMCFKLKRAVGAFSEAVQTSKALETRSVGTAADGAALTAKLAVH EMAHLMALATDDPNAFIKDLGLDDGSPAPSKTTSEGASKEDGGCQAEGGACWAAKRAADAVLEAIGDDSEEPAPG SLDRRDAEARAECFRPGAECWKAKRDLYALKTAARQVSSSY* |
| Coding | >Hirsu2|1371 ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA |
| Transcript | >Hirsu2|1371 ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA |
| Gene | >Hirsu2|1371 ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA |