Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1371
Gene name
LocationContig_13:52529..53105
Strand-
Gene length (bp)576
Transcript length (bp)576
Coding sequence length (bp)576
Protein length (aa) 192

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q01301|CCG4_NEUCR Clock-controlled pheromone ccg-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-4 PE=2 SV=2 1 176 3.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1371
MKFALAIAVVSAVGVLAAPHPSPSPWCFRRYAMCFKLKRAVGAFSEAVQTSKALETRSVGTAADGAALTAKLAVH
EMAHLMALATDDPNAFIKDLGLDDGSPAPSKTTSEGASKEDGGCQAEGGACWAAKRAADAVLEAIGDDSEEPAPG
SLDRRDAEARAECFRPGAECWKAKRDLYALKTAARQVSSSY*
Coding >Hirsu2|1371
ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC
TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG
TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC
GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC
AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG
TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA
AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC
GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA
Transcript >Hirsu2|1371
ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC
TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG
TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC
GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC
AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG
TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA
AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC
GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA
Gene >Hirsu2|1371
ATGAAGTTCGCCCTCGCCATCGCAGTCGTGAGCGCCGTCGGAGTGCTGGCCGCTCCTCATCCGTCGCCGTCGCCC
TGGTGCTTCCGCCGCTACGCCATGTGCTTCAAGCTGAAGCGCGCGGTCGGGGCCTTCTCCGAGGCGGTGCAGACG
TCCAAGGCGCTGGAAACGCGGAGCGTCGGCACGGCCGCCGACGGGGCCGCCCTCACGGCCAAGCTGGCCGTCCAC
GAGATGGCGCACCTGATGGCGCTCGCGACCGACGACCCCAACGCCTTCATCAAGGACCTCGGCCTGGATGACGGC
AGCCCAGCCCCCAGCAAGACGACGAGCGAGGGCGCAAGCAAGGAAGACGGCGGCTGTCAGGCCGAGGGAGGGGCG
TGCTGGGCGGCCAAGCGCGCCGCCGACGCCGTCCTCGAGGCCATCGGCGACGACAGCGAAGAGCCGGCGCCCGGA
AGCCTGGACCGGCGCGACGCCGAGGCGAGGGCCGAGTGCTTCCGCCCCGGCGCCGAGTGCTGGAAGGCCAAGCGC
GATCTGTATGCGCTCAAGACGGCCGCCCGCCAAGTCTCGTCGTCGTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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