Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1336
Gene name
LocationContig_1293:346..1642
Strand-
Gene length (bp)1296
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00615 RGS Regulator of G protein signaling domain 5.7E-09 169 239

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9P7S8|RAX1_SCHPO Protein rax1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rax1 PE=3 SV=1 22 362 1.0E-48
sp|Q08760|RAX1_YEAST Bud site selection protein RAX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAX1 PE=1 SV=1 16 362 9.0E-34

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 250 272 22
2 284 303 19
3 336 358 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1336
MASNPASASPSPQPDLSRNRLPTLFEVLSRRTLPPVDLFSFYIYMRDQQRSVDYLDFWLDVAQHMSLCRHYVREL
RRSVLVATPDVDKAGSKRSSAILESMGDLEPRVAGPSMYATEKERDQDAQMSAFLREDQMQDSPHSGSGPVRPSP
QFSTPRDVTDSNSPSHTVARQDIRASAEKILYTFLLPGAEREITLPGSITEDVTTAIEEHGRDDPEVFDVAKDYV
FQAMERDAFPGFLRMKALGNLIPPTLVMRLIVGLVAMFGAFWAGFVLIFLDRSRATKCWLILPFTVGVYFLASYQ
YSLDPIMAMVGFSEYTPFNFSRIREPYVRQLLAKRAAMVLAVTFLIDAALCVLFILVPGKRL*
Coding >Hirsu2|1336
ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT
GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC
TCTGTCGACTACCTTGACTTTTGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTT
CGGCGATCTGTTCTTGTGGCCACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGC
ATGGGTGACCTCGAGCCGCGCGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAG
ATGTCGGCCTTCCTGAGGGAAGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCG
CAGTTCAGCACGCCGCGCGACGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCC
TCGGCCGAGAAGATCCTCTACACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACC
GAGGACGTCACCACCGCCATCGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTC
TTCCAGGCGATGGAGAGGGACGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACG
CTCGTGATGCGCCTTATCGTCGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTC
GACCGATCGCGCGCCACCAAGTGCTGGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAG
TACTCGCTGGACCCCATCATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAG
CCCTACGTCCGTCAGCTCCTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTC
TGCGTCCTCTTCATCCTCGTGCCCGGCAAGAGGCTGTGA
Transcript >Hirsu2|1336
ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT
GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC
TCTGTCGACTACCTTGACTTTTGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTT
CGGCGATCTGTTCTTGTGGCCACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGC
ATGGGTGACCTCGAGCCGCGCGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAG
ATGTCGGCCTTCCTGAGGGAAGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCG
CAGTTCAGCACGCCGCGCGACGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCC
TCGGCCGAGAAGATCCTCTACACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACC
GAGGACGTCACCACCGCCATCGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTC
TTCCAGGCGATGGAGAGGGACGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACG
CTCGTGATGCGCCTTATCGTCGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTC
GACCGATCGCGCGCCACCAAGTGCTGGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAG
TACTCGCTGGACCCCATCATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAG
CCCTACGTCCGTCAGCTCCTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTC
TGCGTCCTCTTCATCCTCGTGCCCGGCAAGAGGCTGTGA
Gene >Hirsu2|1336
ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT
GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC
TCTGTCGACTACCTTGACTTTTGGTAAGGCACCAGGCACCTCTCGTCTTCCGGCCCTGGAACCCGCCTCCCCCTC
GCCGGGGAAGGGAGAGGAATGGGCGGAGAGACTGGACTTGTGAGCCCGGGCTTGCCGCTGATCCTGCATCATATC
CAGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTTCGGCGATCTGTTCTTGTGGC
CACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGCATGGGTGACCTCGAGCCGCG
CGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAGATGTCGGCCTTCCTGAGGGA
AGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCGCAGTTCAGCACGCCGCGCGA
CGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCCTCGGCCGAGAAGATCCTCTA
CACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACCGAGGACGTCACCACCGCCAT
CGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTCTTCCAGGCGATGGAGAGGGA
CGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACGCTCGTGATGCGCCTTATCGT
CGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTCGACCGATCGCGCGCCACCAA
GTGCTGGGTGAGTCTCTTCGTCCCCTGTTCCACCTCGGCCCCGACGTGCCCGTCGTCCGGCTGCTCACTCCCTCT
TCTCCGCAGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAGTACTCGCTGGACCCCATC
ATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAGCCCTACGTCCGTCAGCTC
CTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTCTGCGTCCTCTTCATCCTC
GTGCCCGGCAAGAGGCTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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