© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1336 |
| Gene name | |
| Location | Contig_1293:346..1642 |
| Strand | - |
| Gene length (bp) | 1296 |
| Transcript length (bp) | 1089 |
| Coding sequence length (bp) | 1089 |
| Protein length (aa) | 363 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00615 | RGS | Regulator of G protein signaling domain | 1.9E-08 | 170 | 239 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7S8|RAX1_SCHPO | Protein rax1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rax1 PE=3 SV=1 | 22 | 362 | 1.0E-48 |
| sp|Q08760|RAX1_YEAST | Bud site selection protein RAX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAX1 PE=1 SV=1 | 16 | 362 | 9.0E-34 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 250 | 272 | 22 |
| 2 | 284 | 303 | 19 |
| 3 | 336 | 358 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1336 MASNPASASPSPQPDLSRNRLPTLFEVLSRRTLPPVDLFSFYIYMRDQQRSVDYLDFWLDVAQHMSLCRHYVREL RRSVLVATPDVDKAGSKRSSAILESMGDLEPRVAGPSMYATEKERDQDAQMSAFLREDQMQDSPHSGSGPVRPSP QFSTPRDVTDSNSPSHTVARQDIRASAEKILYTFLLPGAEREITLPGSITEDVTTAIEEHGRDDPEVFDVAKDYV FQAMERDAFPGFLRMKALGNLIPPTLVMRLIVGLVAMFGAFWAGFVLIFLDRSRATKCWLILPFTVGVYFLASYQ YSLDPIMAMVGFSEYTPFNFSRIREPYVRQLLAKRAAMVLAVTFLIDAALCVLFILVPGKRL* |
| Coding | >Hirsu2|1336 ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC TCTGTCGACTACCTTGACTTTTGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTT CGGCGATCTGTTCTTGTGGCCACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGC ATGGGTGACCTCGAGCCGCGCGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAG ATGTCGGCCTTCCTGAGGGAAGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCG CAGTTCAGCACGCCGCGCGACGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCC TCGGCCGAGAAGATCCTCTACACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACC GAGGACGTCACCACCGCCATCGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTC TTCCAGGCGATGGAGAGGGACGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACG CTCGTGATGCGCCTTATCGTCGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTC GACCGATCGCGCGCCACCAAGTGCTGGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAG TACTCGCTGGACCCCATCATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAG CCCTACGTCCGTCAGCTCCTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTC TGCGTCCTCTTCATCCTCGTGCCCGGCAAGAGGCTGTGA |
| Transcript | >Hirsu2|1336 ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC TCTGTCGACTACCTTGACTTTTGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTT CGGCGATCTGTTCTTGTGGCCACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGC ATGGGTGACCTCGAGCCGCGCGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAG ATGTCGGCCTTCCTGAGGGAAGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCG CAGTTCAGCACGCCGCGCGACGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCC TCGGCCGAGAAGATCCTCTACACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACC GAGGACGTCACCACCGCCATCGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTC TTCCAGGCGATGGAGAGGGACGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACG CTCGTGATGCGCCTTATCGTCGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTC GACCGATCGCGCGCCACCAAGTGCTGGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAG TACTCGCTGGACCCCATCATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAG CCCTACGTCCGTCAGCTCCTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTC TGCGTCCTCTTCATCCTCGTGCCCGGCAAGAGGCTGTGA |
| Gene | >Hirsu2|1336 ATGGCGAGCAATCCGGCCTCGGCGAGTCCGTCGCCGCAGCCCGACCTGTCGAGGAACCGGCTGCCTACGCTCTTT GAGGTGCTGAGCCGCCGCACCCTTCCGCCCGTCGACCTCTTTTCCTTCTACATCTATATGCGAGACCAACAGCGC TCTGTCGACTACCTTGACTTTTGGTAAGGCACCAGGCACCTCTCGTCTTCCGGCCCTGGAACCCGCCTCCCCCTC GCCGGGGAAGGGAGAGGAATGGGCGGAGAGACTGGACTTGTGAGCCCGGGCTTGCCGCTGATCCTGCATCATATC CAGGCTTGACGTGGCTCAACACATGTCGTTGTGTCGTCATTATGTGCGCGAGCTTCGGCGATCTGTTCTTGTGGC CACGCCCGACGTCGACAAGGCCGGCTCCAAGCGGTCGTCGGCCATCTTGGAGAGCATGGGTGACCTCGAGCCGCG CGTGGCAGGCCCGTCCATGTACGCCACGGAGAAGGAGCGGGACCAGGACGCCCAGATGTCGGCCTTCCTGAGGGA AGACCAGATGCAAGACTCGCCCCACAGCGGCTCCGGCCCCGTCCGGCCGAGCCCGCAGTTCAGCACGCCGCGCGA CGTGACCGACTCCAACTCGCCGTCCCACACCGTCGCCCGGCAGGACATCCGCGCCTCGGCCGAGAAGATCCTCTA CACCTTCCTGCTCCCGGGCGCCGAGAGGGAGATCACGCTGCCGGGATCCATCACCGAGGACGTCACCACCGCCAT CGAGGAACACGGCCGGGACGACCCCGAGGTCTTCGACGTGGCCAAGGACTACGTCTTCCAGGCGATGGAGAGGGA CGCCTTCCCGGGCTTCCTGCGCATGAAGGCCCTGGGCAACCTGATCCCCCCCACGCTCGTGATGCGCCTTATCGT CGGCCTCGTCGCCATGTTCGGCGCCTTCTGGGCCGGCTTCGTCCTCATCTTCCTCGACCGATCGCGCGCCACCAA GTGCTGGGTGAGTCTCTTCGTCCCCTGTTCCACCTCGGCCCCGACGTGCCCGTCGTCCGGCTGCTCACTCCCTCT TCTCCGCAGCTCATCCTCCCCTTCACCGTCGGCGTCTACTTCCTCGCCTCGTACCAGTACTCGCTGGACCCCATC ATGGCCATGGTCGGCTTCAGCGAGTACACGCCCTTCAACTTCTCGCGCATCCGCGAGCCCTACGTCCGTCAGCTC CTGGCCAAGCGGGCCGCCATGGTCCTGGCCGTCACCTTCCTCATCGACGCCGCCCTCTGCGTCCTCTTCATCCTC GTGCCCGGCAAGAGGCTGTGA |