Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1333
Gene name
LocationContig_1292:3519..4963
Strand-
Gene length (bp)1444
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 1.1E-11 27 208
PF11710 Git3 G protein-coupled glucose receptor regulating Gpa2 1.4E-06 36 209
PF05462 Dicty_CAR Slime mold cyclic AMP receptor 1.4E-06 44 199

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 18 216 1.0E-11
sp|B7ZCC9|AGRG4_MOUSE Adhesion G-protein coupled receptor G4 OS=Mus musculus GN=Adgrg4 PE=3 SV=1 25 197 1.0E-05

GO

GO Term Description Terminal node
GO:0004930 G protein-coupled receptor activity Yes
GO:0016021 integral component of membrane Yes
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0007165 signal transduction No
GO:0005575 cellular_component No
GO:0009987 cellular process No
GO:0050789 regulation of biological process No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0065007 biological regulation No
GO:0038023 signaling receptor activity No
GO:0004888 transmembrane signaling receptor activity No
GO:0003674 molecular_function No
GO:0060089 molecular transducer activity No
GO:0044425 membrane part No
GO:0050794 regulation of cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 32 51 19
2 58 80 22
3 107 124 17
4 133 155 22
5 182 204 22
6 351 370 19
7 385 407 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1333
MSGRRVLRDAGPGQNAYLSQEEIAILIYIERTGAGLSMVAIGLTVLSFLAFKKLRTTPNLFLVIASLANAAASVA
SMIGYDGLRLGEESALCQAQAFIFEWFMQSDPWWSFAMAVNVFLVFFNNADPETFRKYLWAYCVVCFGGPLIPAI
ALISVRGDSRGPVYGDAALWCWISSSWALVRLYAYYIPIWICILLSFVIYFAVGYHVFHHRNQLLSVSLPRRFHD
KRQKNPPRSGSGGGDSAEESLTRRQDGYGTVITEVEITSALPSLELDFATAPAPGRASVPLAYSPSWPSGLRADS
SSARSNQPQHQFETICSSDSPRPPRHKPLALVRAALAEASQRLKRLDPVKMAYLRTSFIFGFSVLITWIPSSINR
MYSLTNDGRISFSLSIASGCVLPLQGVWNAMIYLTTS*
Coding >Hirsu2|1333
ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC
CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC
TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC
TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG
TGGTTCATGCAGTCGGATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCG
GATCCCGAGACGTTTCGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATT
GCTCTCATCTCCGTCAGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGCTGTGGTGCTGGATTAGTTCG
AGCTGGGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTAC
TTTGCCGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGAC
AAGCGCCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGAGCCTCACTCGGCGCCAA
GATGGCTACGGAACCGTCATCACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACG
GCGCCGGCCCCTGGCCGCGCCTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGC
TCGAGCGCCAGGAGCAACCAGCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGG
CACAAGCCTCTCGCCCTCGTCCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAG
ATGGCCTATTTGCGTACGAGCTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGA
ATGTACAGCCTGACCAACGATGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAG
GGCGTTTGGAATGCCATGATCTACCTCACCACCAGCTAG
Transcript >Hirsu2|1333
ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC
CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC
TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC
TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG
TGGTTCATGCAGTCGGATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCG
GATCCCGAGACGTTTCGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATT
GCTCTCATCTCCGTCAGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGCTGTGGTGCTGGATTAGTTCG
AGCTGGGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTAC
TTTGCCGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGAC
AAGCGCCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGAGCCTCACTCGGCGCCAA
GATGGCTACGGAACCGTCATCACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACG
GCGCCGGCCCCTGGCCGCGCCTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGC
TCGAGCGCCAGGAGCAACCAGCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGG
CACAAGCCTCTCGCCCTCGTCCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAG
ATGGCCTATTTGCGTACGAGCTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGA
ATGTACAGCCTGACCAACGATGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAG
GGCGTTTGGAATGCCATGATCTACCTCACCACCAGCTAG
Gene >Hirsu2|1333
ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC
CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC
TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC
TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG
TGGTCGGTCCTCGCCCTCGCCATTCGTGCCGTTGCCGTGGCTGACTCGGCCTCGCGCCACAGGTTCATGCAGTCG
GATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCGGATCCCGAGACGTTT
CGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATTGCTCTCATCTCCGTC
AGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGGTATGTCTTCCGCCCCGTTTACTGCCTGCCTCCCTC
TCGGTGCTCGAGACGGAGCTCGAGACCCAGATTGCTAATATTGTGACAGCTGTGGTGCTGGATTAGTTCGAGCTG
GGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTACTTTGC
CGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGACAAGCG
CCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGGCACGCATCTCTCTCACCCTGTC
GCTGCTCAGCCAGGTGCGCACTAACACAATCTGGCAGAGCCTCACTCGGCGCCAAGATGGCTACGGAACCGTCAT
CACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACGGCGCCGGCCCCTGGCCGCGC
CTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGCTCGAGCGCCAGGAGCAACCA
GCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGGCACAAGCCTCTCGCCCTCGT
CCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAGATGGCCTATTTGCGTACGAG
CTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGAATGTACAGCCTGACCAACGA
TGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAGGGCGTTTGGAATGCCATGAT
CTACCTCACCACCAGCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail