© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1333 |
| Gene name | |
| Location | Contig_1292:3519..4963 |
| Strand | - |
| Gene length (bp) | 1444 |
| Transcript length (bp) | 1239 |
| Coding sequence length (bp) | 1239 |
| Protein length (aa) | 413 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00002 | 7tm_2 | 7 transmembrane receptor (Secretin family) | 1.2E-11 | 27 | 208 |
| PF11710 | Git3 | G protein-coupled glucose receptor regulating Gpa2 | 1.5E-06 | 36 | 209 |
| PF05462 | Dicty_CAR | Slime mold cyclic AMP receptor | 1.5E-06 | 44 | 199 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54U75|CRLA_DICDI | Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 | 18 | 216 | 1.0E-11 |
| sp|B7ZCC9|AGRG4_MOUSE | Adhesion G-protein coupled receptor G4 OS=Mus musculus GN=Adgrg4 PE=3 SV=1 | 25 | 197 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004930 | G protein-coupled receptor activity | Yes |
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0050789 | regulation of biological process | No |
| GO:0009987 | cellular process | No |
| GO:0007165 | signal transduction | No |
| GO:0005575 | cellular_component | No |
| GO:0065007 | biological regulation | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 51 | 19 |
| 2 | 58 | 80 | 22 |
| 3 | 107 | 124 | 17 |
| 4 | 133 | 155 | 22 |
| 5 | 182 | 204 | 22 |
| 6 | 351 | 370 | 19 |
| 7 | 385 | 407 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1333 MSGRRVLRDAGPGQNAYLSQEEIAILIYIERTGAGLSMVAIGLTVLSFLAFKKLRTTPNLFLVIASLANAAASVA SMIGYDGLRLGEESALCQAQAFIFEWFMQSDPWWSFAMAVNVFLVFFNNADPETFRKYLWAYCVVCFGGPLIPAI ALISVRGDSRGPVYGDAALWCWISSSWALVRLYAYYIPIWICILLSFVIYFAVGYHVFHHRNQLLSVSLPRRFHD KRQKNPPRSGSGGGDSAEESLTRRQDGYGTVITEVEITSALPSLELDFATAPAPGRASVPLAYSPSWPSGLRADS SSARSNQPQHQFETICSSDSPRPPRHKPLALVRAALAEASQRLKRLDPVKMAYLRTSFIFGFSVLITWIPSSINR MYSLTNDGRISFSLSIASGCVLPLQGVWNAMIYLTTS* |
| Coding | >Hirsu2|1333 ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG TGGTTCATGCAGTCGGATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCG GATCCCGAGACGTTTCGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATT GCTCTCATCTCCGTCAGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGCTGTGGTGCTGGATTAGTTCG AGCTGGGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTAC TTTGCCGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGAC AAGCGCCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGAGCCTCACTCGGCGCCAA GATGGCTACGGAACCGTCATCACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACG GCGCCGGCCCCTGGCCGCGCCTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGC TCGAGCGCCAGGAGCAACCAGCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGG CACAAGCCTCTCGCCCTCGTCCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAG ATGGCCTATTTGCGTACGAGCTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGA ATGTACAGCCTGACCAACGATGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAG GGCGTTTGGAATGCCATGATCTACCTCACCACCAGCTAG |
| Transcript | >Hirsu2|1333 ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG TGGTTCATGCAGTCGGATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCG GATCCCGAGACGTTTCGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATT GCTCTCATCTCCGTCAGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGCTGTGGTGCTGGATTAGTTCG AGCTGGGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTAC TTTGCCGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGAC AAGCGCCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGAGCCTCACTCGGCGCCAA GATGGCTACGGAACCGTCATCACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACG GCGCCGGCCCCTGGCCGCGCCTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGC TCGAGCGCCAGGAGCAACCAGCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGG CACAAGCCTCTCGCCCTCGTCCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAG ATGGCCTATTTGCGTACGAGCTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGA ATGTACAGCCTGACCAACGATGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAG GGCGTTTGGAATGCCATGATCTACCTCACCACCAGCTAG |
| Gene | >Hirsu2|1333 ATGTCGGGCCGCCGTGTGCTGCGAGACGCCGGCCCAGGCCAGAACGCCTACCTGAGCCAGGAGGAGATCGCGATC CTCATCTACATCGAGCGCACCGGCGCTGGCCTGTCCATGGTCGCCATTGGCCTGACCGTCCTGTCCTTCCTGGCC TTCAAGAAGCTTCGAACGACGCCGAACCTGTTCCTCGTCATCGCTTCGCTTGCCAACGCGGCCGCCAGCGTCGCC TCCATGATTGGATACGACGGCCTCCGTTTGGGTGAAGAGTCAGCCCTGTGCCAGGCCCAGGCCTTCATCTTCGAG TGGTCGGTCCTCGCCCTCGCCATTCGTGCCGTTGCCGTGGCTGACTCGGCCTCGCGCCACAGGTTCATGCAGTCG GATCCTTGGTGGTCGTTCGCCATGGCCGTCAACGTCTTCCTCGTCTTCTTCAACAACGCGGATCCCGAGACGTTT CGAAAATATCTCTGGGCCTACTGCGTCGTCTGCTTTGGCGGCCCTTTGATTCCCGCCATTGCTCTCATCTCCGTC AGGGGAGACTCGCGAGGGCCCGTCTACGGCGACGCGGCGGTATGTCTTCCGCCCCGTTTACTGCCTGCCTCCCTC TCGGTGCTCGAGACGGAGCTCGAGACCCAGATTGCTAATATTGTGACAGCTGTGGTGCTGGATTAGTTCGAGCTG GGCTCTGGTTCGACTGTACGCCTACTATATCCCCATCTGGATCTGTATCCTCCTCTCCTTTGTCATCTACTTTGC CGTCGGCTACCACGTCTTCCATCACCGAAACCAGCTGCTGAGCGTGTCACTGCCTCGGAGATTCCACGACAAGCG CCAAAAGAACCCGCCACGATCCGGCAGCGGGGGTGGTGACTCGGCCGAAGAGGCACGCATCTCTCTCACCCTGTC GCTGCTCAGCCAGGTGCGCACTAACACAATCTGGCAGAGCCTCACTCGGCGCCAAGATGGCTACGGAACCGTCAT CACCGAGGTCGAGATCACGTCCGCCCTGCCGTCGCTCGAATTGGACTTTGCGACGGCGCCGGCCCCTGGCCGCGC CTCGGTCCCGCTCGCCTACAGCCCGTCTTGGCCCTCGGGTCTGCGCGCCGACAGCTCGAGCGCCAGGAGCAACCA GCCTCAGCACCAGTTCGAGACCATCTGCTCTTCCGACAGCCCACGCCCTCCGAGGCACAAGCCTCTCGCCCTCGT CCGCGCCGCCCTGGCCGAGGCGTCGCAGAGGCTCAAGCGGCTCGACCCGGTCAAGATGGCCTATTTGCGTACGAG CTTCATCTTCGGCTTCTCCGTCCTCATCACCTGGATCCCCAGCTCCATCAACCGAATGTACAGCCTGACCAACGA TGGCCGCATCAGCTTTAGTCTCAGCATCGCCAGCGGCTGCGTCCTGCCTCTGCAGGGCGTTTGGAATGCCATGAT CTACCTCACCACCAGCTAG |