Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1332
Gene name
Location	Contig_1292:1910..2882
Strand	+
Gene length (bp)	972
Transcript length (bp)	804
Coding sequence length (bp)	804
Protein length (aa)	268

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	2.7E-22	14	227
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	2.5E-05	10	254

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Y7K0\|YGL3_SCHPO	UPF0659 protein C216.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC216.03 PE=3 SV=1	11	266	2.0E-11
sp\|O07609\|YHFK_BACSU	Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain 168) GN=yhfK PE=2 SV=1	10	251	8.0E-09

GO

GO Term	Description	Terminal node
GO:0050662	coenzyme binding	Yes
GO:0003824	catalytic activity	Yes
GO:0048037	cofactor binding	No
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1332 MASASKQHHVLVLGGHGKIAQLLTPLLLRRSWTVTSLIRARDQIPAIEKLGAGLPGKLNVLVRSIDDVDSQEHAA GILDEVRPDYVAWSAGAGGSGGPERTFKIDRDAAAHFIRASAARPSISRFLLVSYTGSRRAGASWWPAGEWDDYD RSVNNGALATYHKAKIAADEVLYETSKKSASLVGICLRPGTLTLEPAGKVELGRTAHVKGNVSRASVAETAAALL AADGVKNCWLDLLDGKEDVASAVHRVVADGTDAAEGESVYTS*
Coding	>Hirsu2\|1332 ATGGCCTCCGCCTCCAAGCAGCACCACGTCCTCGTCCTCGGCGGCCACGGCAAGATCGCCCAGCTGCTGACGCCG CTGCTGCTGCGCCGCTCCTGGACCGTCACCAGCCTCATCCGCGCCCGCGACCAGATCCCCGCCATCGAGAAGCTC GGCGCCGGCCTGCCCGGCAAGCTCAACGTCCTGGTCCGCAGCATCGACGACGTCGACAGCCAGGAGCACGCGGCG GGCATCCTGGACGAGGTGAGGCCCGACTATGTCGCCTGGAGCGCCGGCGCCGGAGGCAGTGGTGGTCCGGAAAGG ACCTTCAAGATCGACCGCGACGCCGCCGCCCACTTCATTCGCGCCTCCGCCGCAAGGCCCTCCATCAGCCGCTTC CTCCTCGTCTCCTACACGGGCTCGCGCCGCGCGGGGGCGTCGTGGTGGCCCGCCGGCGAGTGGGACGACTACGAC AGGTCGGTCAACAACGGCGCGCTGGCGACCTACCACAAGGCCAAGATCGCCGCCGACGAGGTCCTGTACGAGACG TCCAAGAAGAGCGCCTCCCTCGTCGGCATCTGCCTGCGCCCCGGCACCCTGACGCTCGAGCCGGCGGGCAAGGTC GAGCTGGGCAGGACGGCGCACGTCAAGGGCAACGTGAGCAGGGCCTCGGTGGCCGAGACCGCGGCCGCGCTGCTG GCGGCCGACGGCGTCAAGAACTGCTGGCTGGACCTGTTGGACGGCAAGGAAGACGTGGCGTCGGCCGTCCACAGA GTTGTGGCGGACGGCACCGACGCGGCGGAGGGAGAATCCGTCTATACCTCGTAG
Transcript	>Hirsu2\|1332 ATGGCCTCCGCCTCCAAGCAGCACCACGTCCTCGTCCTCGGCGGCCACGGCAAGATCGCCCAGCTGCTGACGCCG CTGCTGCTGCGCCGCTCCTGGACCGTCACCAGCCTCATCCGCGCCCGCGACCAGATCCCCGCCATCGAGAAGCTC GGCGCCGGCCTGCCCGGCAAGCTCAACGTCCTGGTCCGCAGCATCGACGACGTCGACAGCCAGGAGCACGCGGCG GGCATCCTGGACGAGGTGAGGCCCGACTATGTCGCCTGGAGCGCCGGCGCCGGAGGCAGTGGTGGTCCGGAAAGG ACCTTCAAGATCGACCGCGACGCCGCCGCCCACTTCATTCGCGCCTCCGCCGCAAGGCCCTCCATCAGCCGCTTC CTCCTCGTCTCCTACACGGGCTCGCGCCGCGCGGGGGCGTCGTGGTGGCCCGCCGGCGAGTGGGACGACTACGAC AGGTCGGTCAACAACGGCGCGCTGGCGACCTACCACAAGGCCAAGATCGCCGCCGACGAGGTCCTGTACGAGACG TCCAAGAAGAGCGCCTCCCTCGTCGGCATCTGCCTGCGCCCCGGCACCCTGACGCTCGAGCCGGCGGGCAAGGTC GAGCTGGGCAGGACGGCGCACGTCAAGGGCAACGTGAGCAGGGCCTCGGTGGCCGAGACCGCGGCCGCGCTGCTG GCGGCCGACGGCGTCAAGAACTGCTGGCTGGACCTGTTGGACGGCAAGGAAGACGTGGCGTCGGCCGTCCACAGA GTTGTGGCGGACGGCACCGACGCGGCGGAGGGAGAATCCGTCTATACCTCGTAG
Gene	>Hirsu2\|1332 ATGGCCTCCGCCTCCAAGCAGCACCACGTCCTCGTCCTCGGCGGCCACGGCAAGATCGCCCAGCTGCTGACGCCG CTGCTGCTGCGCCGCTCCTGGACCGTCACCAGCCTCATCCGCGCCCGCGACCAGATCCCCGCCATCGAGAAGCTC GGCGCCGGCCTGCCCGGCAAGCTCAACGTCCTGGTCCGCAGCATCGACGACGTCGACAGCCAGGAGCACGCGGCG GGCATCCTGGACGAGGTGAGGCCCGACTATGTCGCCTGGAGCGCCGGTGAGCTTTCTCGTCCCCGGGAGCGGAGC GGAGGACGGAGGCCGGGCTGGCTGACTGGCTTGGTTGACTTGATGACGCAGGCGCCGGAGGCAGTGGTGGTCCGG AAAGGGTACGAAAGCGACCTCTTCCCCTTCTTCTCTGCCCCGTGCGGACAGTGGCTAACGAGGGCCGCAAACTCG GGGACGGCGGACGTCCAGACCTTCAAGATCGACCGCGACGCCGCCGCCCACTTCATTCGCGCCTCCGCCGCAAGG CCCTCCATCAGCCGCTTCCTCCTCGTCTCCTACACGGGCTCGCGCCGCGCGGGGGCGTCGTGGTGGCCCGCCGGC GAGTGGGACGACTACGACAGGTCGGTCAACAACGGCGCGCTGGCGACCTACCACAAGGCCAAGATCGCCGCCGAC GAGGTCCTGTACGAGACGTCCAAGAAGAGCGCCTCCCTCGTCGGCATCTGCCTGCGCCCCGGCACCCTGACGCTC GAGCCGGCGGGCAAGGTCGAGCTGGGCAGGACGGCGCACGTCAAGGGCAACGTGAGCAGGGCCTCGGTGGCCGAG ACCGCGGCCGCGCTGCTGGCGGCCGACGGCGTCAAGAACTGCTGGCTGGACCTGTTGGACGGCAAGGAAGACGTG GCGTCGGCCGTCCACAGAGTTGTGGCGGACGGCACCGACGCGGCGGAGGGAGAATCCGTCTATACCTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail