Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1323
Gene name
LocationContig_129:25781..26925
Strand+
Gene length (bp)1144
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 1.7E-36 32 158

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P53693|RDS1_SCHPO Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 33 312 6.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1323
MYRSLALLAACLASFGVAAPVEKGKEAYGAIGDVDILNYALTLEYLERKFYVDGLKNYTKHDFYKAGFSKEFYEN
LKGSHVDFLAGALGDKAIKEPSFSFPVKDASSFVGLASVLEGVGVAAYLGAAGSIANKAYLGAAGSILTVEARHS
SYIRSALKQKPAPTAYDAALDFNQVFSLASQFVTGFAEGTKVPFKAFPALTASPSKGTKYCPGKGSVVFKGAKGK
AEKSEKYSKGAKVHAVFYSGMETYYVPVEASDKGDDYTVRLPGADYGKKGRAAPAGQTYITLSTADGKSVTAKDE
NTIAGVAIIEIGC*
Coding >Hirsu2|1323
ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG
GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC
TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC
CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC
CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC
GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG
TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC
TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG
ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG
GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC
GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC
CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG
AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG
Transcript >Hirsu2|1323
ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG
GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC
TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC
CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC
CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC
GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG
TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC
TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG
ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG
GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC
GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC
CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG
AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG
Gene >Hirsu2|1323
ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG
GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC
TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC
CTGAAGGGTGTGCGGGACGACGAAAAGGCAAGTCGCACCTCTCCTTCTTCTGTCTCCTCTTCCTCTGCCTTCTTC
CTCCTGCTCTCCCGCCAGACGGACGGTTCGTCCACACGCACGGTCCAACTAACGCCGGGGCAACCGCTTCTAGTC
CCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTCCCCGTCAAGGA
CGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGCGCCGCCGGCTC
CATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCGTCGTACATCCG
GTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTCTTCTCCCTGGC
CTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTGACGGCGTCGCC
CTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAGGCAGAGAAGAG
CGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTACGTCCCAGTCGA
GGCTTCGGACAAAGGCGACGACGTGCGTTCTTCCCTCACCCTCCATTCTCCACTCCCTTTTCCATCTCTCTAACA
GGCTGGACAGTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGCCGCGCCGCGCCCGCTGGACAGAC
CTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAGAACACCATCGCCGGTGTTGCCAT
CATCGAGATTGGGTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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