Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1323
Gene name
Location	Contig_129:25781..26925
Strand	+
Gene length (bp)	1144
Transcript length (bp)	942
Coding sequence length (bp)	942
Protein length (aa)	314

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13668	Ferritin_2	Ferritin-like domain	2.2E-38	32	159

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53693\|RDS1_SCHPO	Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2	33	312	6.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1323 MYRSLALLAACLASFGVAAPVEKGKEAYGAIGDVDILNYALTLEYLERKFYVDGLKNYTKHDFYKAGFSKEFYEN LKGSHVDFLAGALGDKAIKEPSFSFPVKDASSFVGLASVLEGVGVAAYLGAAGSIANKAYLGAAGSILTVEARHS SYIRSALKQKPAPTAYDAALDFNQVFSLASQFVTGFAEGTKVPFKAFPALTASPSKGTKYCPGKGSVVFKGAKGK AEKSEKYSKGAKVHAVFYSGMETYYVPVEASDKGDDYTVRLPGADYGKKGRAAPAGQTYITLSTADGKSVTAKDE NTIAGVAIIEIGC*
Coding	>Hirsu2\|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG
Transcript	>Hirsu2\|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG
Gene	>Hirsu2\|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTGTGCGGGACGACGAAAAGGCAAGTCGCACCTCTCCTTCTTCTGTCTCCTCTTCCTCTGCCTTCTTC CTCCTGCTCTCCCGCCAGACGGACGGTTCGTCCACACGCACGGTCCAACTAACGCCGGGGCAACCGCTTCTAGTC CCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTCCCCGTCAAGGA CGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGCGCCGCCGGCTC CATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCGTCGTACATCCG GTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTCTTCTCCCTGGC CTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTGACGGCGTCGCC CTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAGGCAGAGAAGAG CGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTACGTCCCAGTCGA GGCTTCGGACAAAGGCGACGACGTGCGTTCTTCCCTCACCCTCCATTCTCCACTCCCTTTTCCATCTCTCTAACA GGCTGGACAGTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGCCGCGCCGCGCCCGCTGGACAGAC CTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAGAACACCATCGCCGGTGTTGCCAT CATCGAGATTGGGTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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