Protein ID | Hirsu2|1323 |
Gene name | |
Location | Contig_129:25781..26925 |
Strand | + |
Gene length (bp) | 1144 |
Transcript length (bp) | 942 |
Coding sequence length (bp) | 942 |
Protein length (aa) | 314 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13668 | Ferritin_2 | Ferritin-like domain | 2.2E-38 | 32 | 159 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53693|RDS1_SCHPO | Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 | 33 | 312 | 6.0E-08 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1323 MYRSLALLAACLASFGVAAPVEKGKEAYGAIGDVDILNYALTLEYLERKFYVDGLKNYTKHDFYKAGFSKEFYEN LKGSHVDFLAGALGDKAIKEPSFSFPVKDASSFVGLASVLEGVGVAAYLGAAGSIANKAYLGAAGSILTVEARHS SYIRSALKQKPAPTAYDAALDFNQVFSLASQFVTGFAEGTKVPFKAFPALTASPSKGTKYCPGKGSVVFKGAKGK AEKSEKYSKGAKVHAVFYSGMETYYVPVEASDKGDDYTVRLPGADYGKKGRAAPAGQTYITLSTADGKSVTAKDE NTIAGVAIIEIGC* |
Coding | >Hirsu2|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG |
Transcript | >Hirsu2|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTTCCCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTC CCCGTCAAGGACGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGC GCCGCCGGCTCCATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCG TCGTACATCCGGTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTC TTCTCCCTGGCCTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTG ACGGCGTCGCCCTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAG GCAGAGAAGAGCGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTAC GTCCCAGTCGAGGCTTCGGACAAAGGCGACGACTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGC CGCGCCGCGCCCGCTGGACAGACCTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAG AACACCATCGCCGGTGTTGCCATCATCGAGATTGGGTGCTAG |
Gene | >Hirsu2|1323 ATGTATCGGTCACTCGCCCTCTTGGCAGCCTGCCTCGCCTCCTTCGGCGTTGCGGCGCCGGTGGAAAAGGGCAAG GAGGCGTACGGGGCGATTGGAGACGTCGACATCCTCAACTATGCCCTGACGCTCGAGTATCTCGAGCGTAAGTTC TACGTGGACGGCCTCAAGAACTACACCAAGCACGACTTCTACAAGGCCGGCTTCAGCAAGGAGTTCTACGAGAAC CTGAAGGGTGTGCGGGACGACGAAAAGGCAAGTCGCACCTCTCCTTCTTCTGTCTCCTCTTCCTCTGCCTTCTTC CTCCTGCTCTCCCGCCAGACGGACGGTTCGTCCACACGCACGGTCCAACTAACGCCGGGGCAACCGCTTCTAGTC CCACGTCGATTTCCTGGCTGGCGCGCTGGGCGACAAGGCCATCAAGGAGCCCTCGTTCTCCTTCCCCGTCAAGGA CGCCTCGAGCTTCGTCGGCCTGGCCAGCGTGCTCGAGGGCGTCGGCGTGGCCGCCTATCTGGGCGCCGCCGGCTC CATCGCCAACAAGGCTTACCTGGGCGCCGCCGGCTCCATCCTGACGGTCGAGGCGCGTCACTCGTCGTACATCCG GTCGGCGCTCAAGCAGAAGCCGGCACCGACGGCCTACGACGCCGCCCTCGACTTCAACCAGGTCTTCTCCCTGGC CTCGCAGTTCGTCACGGGTTTCGCCGAGGGCACTAAGGTCCCCTTCAAGGCGTTCCCCGCCCTGACGGCGTCGCC CTCCAAGGGCACCAAGTATTGCCCGGGCAAGGGCTCCGTTGTCTTCAAGGGCGCCAAGGGCAAGGCAGAGAAGAG CGAAAAGTACTCCAAGGGCGCCAAGGTGCATGCTGTCTTCTACTCGGGCATGGAGACTTACTACGTCCCAGTCGA GGCTTCGGACAAAGGCGACGACGTGCGTTCTTCCCTCACCCTCCATTCTCCACTCCCTTTTCCATCTCTCTAACA GGCTGGACAGTACACCGTCAGGCTGCCTGGTGCCGACTACGGCAAGAAGGGCCGCGCCGCGCCCGCTGGACAGAC CTATATCACGCTGAGCACGGCCGACGGCAAGAGTGTCACCGCCAAGGACGAGAACACCATCGCCGGTGTTGCCAT CATCGAGATTGGGTGCTAG |