Protein ID | Hirsu2|130 |
Gene name | |
Location | Contig_102:30535..31113 |
Strand | + |
Gene length (bp) | 578 |
Transcript length (bp) | 528 |
Coding sequence length (bp) | 528 |
Protein length (aa) | 176 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09351 | DUF1993 | Domain of unknown function (DUF1993) | 7.1E-49 | 5 | 160 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.8673 | 0.2277 | 0.079 | 0.0771 | 0.2297 | 0.0162 | 0.0665 | 0.2108 | 0.3697 | 0.0279 |
Orthofinder run ID | 4 |
Orthogroup | 702 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|130 MSYTLYDATIVMVQHCVESVKCILQKGEAAPNAASLLEARIHEDMLPLSFQVHMVTSLSEKVLANLLGREPMKLE NNFKTFDDMYKRIAVVSEVLAKADRDTINGRDGQTVKFDMGPKAVEISTLGYVNGVVLPNILFHLTTAYDILRKE GVPLGKMDYLRPFFGKYVDMAALGF* |
Coding | >Hirsu2|130 ATGAGCTACACACTCTACGACGCAACCATTGTCATGGTCCAGCACTGCGTGGAATCGGTCAAGTGCATTCTTCAG AAGGGCGAGGCGGCGCCCAACGCGGCAAGCCTGCTCGAGGCGCGGATCCACGAGGACATGCTGCCGCTGTCGTTC CAGGTGCACATGGTGACGAGCCTGTCGGAAAAGGTGCTTGCCAACCTGTTGGGCAGGGAGCCGATGAAGCTAGAG AACAACTTCAAGACGTTCGACGACATGTACAAGCGCATAGCCGTCGTCAGCGAGGTGCTGGCCAAGGCCGACAGA GACACCATCAACGGCCGCGACGGGCAGACTGTGAAGTTCGACATGGGCCCCAAGGCGGTCGAGATCTCGACGCTC GGATACGTCAACGGCGTGGTCCTGCCCAATATCCTCTTCCACCTCACAACGGCCTACGATATCCTGCGCAAGGAG GGCGTGCCGCTGGGCAAAATGGACTATCTCAGGCCCTTCTTCGGCAAGTACGTCGACATGGCGGCGCTGGGATTC TGA |
Transcript | >Hirsu2|130 ATGAGCTACACACTCTACGACGCAACCATTGTCATGGTCCAGCACTGCGTGGAATCGGTCAAGTGCATTCTTCAG AAGGGCGAGGCGGCGCCCAACGCGGCAAGCCTGCTCGAGGCGCGGATCCACGAGGACATGCTGCCGCTGTCGTTC CAGGTGCACATGGTGACGAGCCTGTCGGAAAAGGTGCTTGCCAACCTGTTGGGCAGGGAGCCGATGAAGCTAGAG AACAACTTCAAGACGTTCGACGACATGTACAAGCGCATAGCCGTCGTCAGCGAGGTGCTGGCCAAGGCCGACAGA GACACCATCAACGGCCGCGACGGGCAGACTGTGAAGTTCGACATGGGCCCCAAGGCGGTCGAGATCTCGACGCTC GGATACGTCAACGGCGTGGTCCTGCCCAATATCCTCTTCCACCTCACAACGGCCTACGATATCCTGCGCAAGGAG GGCGTGCCGCTGGGCAAAATGGACTATCTCAGGCCCTTCTTCGGCAAGTACGTCGACATGGCGGCGCTGGGATTC TGA |
Gene | >Hirsu2|130 ATGAGCTACACACTCTACGACGCAACCATTGTCATGGTCCAGCACTGCGTGGAATCGGTCAAGTGCATTCTTCAG AAGGGCGAGGCGGCGCCCAACGCGGCAAGCCTGCTCGAGGCGCGGATCCACGAGGACATGCTGCCGCTGTCGTTC CAGGTGCACATGGTGACGAGCCTGTCGGAAAAGGTGCTTGCCAACCTGTTGGGCAGGGAGCCGATGAAGCTAGAG AACAACTTCAAGACGTTCGACGACATGTACAAGCGCATAGCCGTCGTCAGCGAGGTGCTGGCCAAGGCCGACAGA GACACCATCAACGGCCGCGACGGGCAGACTGTGAAGTTCGACATGGGCCCCAAGGCGGTCGAGATCTCGACGCTC GGATACGTCAACGGCGTGGTCCTGCCCAATATCCTCTTCCACCTCACAACGTCAGTGCTGGCTATCATGCCTGGA GAGTGGCCTACTGACCTTGGTACAGGGCCTACGATATCCTGCGCAAGGAGGGCGTGCCGCTGGGCAAAATGGACT ATCTCAGGCCCTTCTTCGGCAAGTACGTCGACATGGCGGCGCTGGGATTCTGA |