Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1292
Gene name
LocationContig_1281:4081..5731
Strand+
Gene length (bp)1650
Transcript length (bp)1464
Coding sequence length (bp)1464
Protein length (aa) 488

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00487 FA_desaturase Fatty acid desaturase 9.2E-27 146 432
PF11960 DUF3474 Domain of unknown function (DUF3474) 6.8E-07 83 119

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y8H5|FAD12_MORAP Delta(12) fatty acid desaturase OS=Mortierella alpina PE=1 SV=2 60 473 1.0E-106
sp|P59668|FAD12_MORIS Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1 66 473 3.0E-106
sp|P46313|FAD6E_ARATH Delta(12)-fatty-acid desaturase OS=Arabidopsis thaliana GN=FAD2 PE=1 SV=1 86 473 1.0E-92
sp|Q84VT2|FAD12_PUNGR Delta(12)-acyl-lipid-desaturase OS=Punica granatum GN=FAD12 PE=2 SV=2 86 474 3.0E-91
sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1 83 473 4.0E-91
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y8H5|FAD12_MORAP Delta(12) fatty acid desaturase OS=Mortierella alpina PE=1 SV=2 60 473 1.0E-106
sp|P59668|FAD12_MORIS Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1 66 473 3.0E-106
sp|P46313|FAD6E_ARATH Delta(12)-fatty-acid desaturase OS=Arabidopsis thaliana GN=FAD2 PE=1 SV=1 86 473 1.0E-92
sp|Q84VT2|FAD12_PUNGR Delta(12)-acyl-lipid-desaturase OS=Punica granatum GN=FAD12 PE=2 SV=2 86 474 3.0E-91
sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1 83 473 4.0E-91
sp|Q39287|FAD6E_BRAJU Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1 84 473 6.0E-90
sp|Q84UB9|FAD12_TRIKI Delta(12)-oleate desaturase OS=Trichosanthes kirilowii GN=FAD2 PE=2 SV=1 86 473 1.0E-89
sp|A3F5L3|DES2_SORBI Fatty acid desaturase DES2 OS=Sorghum bicolor GN=DES2 PE=2 SV=1 86 473 2.0E-89
sp|Q41131|FH12_RICCO Phosphatidylcholine 12-monooxygenase OS=Ricinus communis GN=FAH12 PE=1 SV=1 84 473 5.0E-87
sp|P48630|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1 84 473 5.0E-87
sp|D2CPE1|FH12M_RICCO Phosphatidylcholine 12-monooxygenase OS=Ricinus communis GN=FAH12 PE=2 SV=1 84 473 3.0E-85
sp|Q8GZC3|FAD2_VERFO Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii GN=FAD2 PE=1 SV=1 86 473 1.0E-84
sp|Q84UC0|FADX_TRIKI Bifunctional fatty acid conjugase/Delta(12)-oleate desaturase OS=Trichosanthes kirilowii GN=FAC PE=2 SV=1 86 473 8.0E-84
sp|Q84UB8|FADX_PUNGR Bifunctional fatty acid conjugase/Delta(12)-oleate desaturase OS=Punica granatum GN=FADX PE=1 SV=1 86 473 1.0E-82
sp|Q9SP62|FADX_IMPBA Delta(12) acyl-lipid conjugase (11E,13E-forming) OS=Impatiens balsamina GN=FADX PE=1 SV=1 85 473 2.0E-81
sp|Q6RS95|FAD21_DIMSI Acyl-lipid (9+3)-(E)-desaturase OS=Dimorphotheca sinuata PE=1 SV=1 83 473 2.0E-80
sp|O81931|FAD12_CREAL Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=1 SV=2 86 473 3.0E-78
sp|Q9SP61|FADX_MOMCH Delta(12) acyl-lipid conjugase (11E,13E-forming) OS=Momordica charantia GN=FADX PE=1 SV=1 86 473 4.0E-77
sp|Q8GZC2|FADX_VERFO Bifunctional desaturase/conjugase FADX OS=Vernicia fordii PE=1 SV=1 84 473 9.0E-77
sp|Q6RS96|FAD22_DIMSI Delta(9) fatty acid conjugase-like enzyme OS=Dimorphotheca sinuata PE=2 SV=1 86 473 4.0E-68
sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1 85 460 4.0E-58
sp|P48619|FAD3C_RICCO Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1 85 461 3.0E-52
sp|P48625|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1 67 461 1.0E-51
sp|P32291|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Vigna radiata var. radiata GN=ARG1 PE=2 SV=1 77 460 2.0E-50
sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1 85 461 1.0E-49
sp|P48622|FAD3D_ARATH Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1 54 438 4.0E-49
sp|P46310|FAD3C_ARATH Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=2 SV=1 85 438 1.0E-48
sp|P48618|FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1 61 438 5.0E-48
sp|P48624|FAD3E_BRANA Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1 86 460 1.0E-47
sp|P48623|FAD3E_ARATH Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1 86 460 2.0E-47
sp|P48621|FAD3C_SOYBN Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1 85 461 1.0E-43
sp|Q594P3|DES3_SORBI Fatty acid desaturase DES3 OS=Sorghum bicolor GN=DES3 PE=1 SV=1 76 438 2.0E-43
sp|A3F5L2|DES1_SORBI Probable fatty acid desaturase DES1 OS=Sorghum bicolor GN=DES1 PE=2 SV=1 64 461 2.0E-42
sp|Q9NEQ0|FAT1_CAEEL Omega-3 fatty acid desaturase fat-1 OS=Caenorhabditis elegans GN=fat-1 PE=2 SV=1 89 473 1.0E-36
sp|G5EGA5|FAT2_CAEEL Delta(12) fatty acid desaturase fat-2 OS=Caenorhabditis elegans GN=fat-2 PE=2 SV=1 89 423 1.0E-35
sp|P46312|FAD6C_ARATH Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2 50 429 2.0E-18
sp|P48627|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1 10 429 8.0E-18
sp|Q54794|DESA_ARTPT Delta(12)-fatty-acid desaturase OS=Arthrospira platensis GN=desA PE=1 SV=1 151 445 1.0E-17
sp|P48629|FAD6C_SPIOL Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1 85 445 6.0E-17
sp|P48628|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1 87 429 2.0E-14
sp|P20388|DESA_SYNY3 Delta(12)-fatty-acid desaturase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=desA PE=1 SV=1 87 423 1.0E-12
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GO

GO Term Description Terminal node
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water Yes
GO:0006629 lipid metabolic process Yes
GO:0055114 oxidation-reduction process Yes
GO:0008152 metabolic process No
GO:0016491 oxidoreductase activity No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 112 131 19
2 143 165 22
3 309 328 19
4 335 357 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1292
MASSSSAAAAAAALSSSGGKAVLRRSLTSATATDTESSAAVSPSDSPRPSPSSTSLSSLSSVDAAAAKPAAYAGL
VDTYGNSFTPPDFTIKDIRDAIPRHCFERSALRGYGYILRDLACLAATFLVFHNLVTPDRVPSTPLRALLWGLYS
LLQGLFATGLWVIAHECGHGAFSDSRLVNDLTGWLLHSSLLVPYFSWQISHGKHHKATGNMERDMVFVPRTRDQQ
ATRLGRMVHELGELAEETPAYTLLMLVLQQLVGWPNYLLTNVTGHNFHHRQREGRGRGKANGFGGRVNHFDPASP
LYEHKDAKLIVLSDLGIAIAAAALFYLGNRFGWANMAVWYFVPYLWVNHWLVAITFLQHTDPSLPHYTADEWNFV
RGAAATIDREMGFVGRHLLHGIIETHVLHHYVSTIPFYNADEASDAIRPIMGKHYRSDTEGGPWGFIRALWRSAR
MCQWVEPSADAEGPGKGILFFRNGNGLGTKPVSMKSE*
Coding >Hirsu2|1292
ATGGCCTCGTCCTCGTCGGCCGCCGCCGCCGCCGCCGCCCTCTCGTCGTCGGGCGGCAAGGCGGTGCTGCGGCGC
AGCTTGACGTCGGCCACGGCCACCGACACGGAGTCGTCGGCCGCCGTCTCGCCCTCGGACTCGCCCCGGCCCTCG
CCCTCGTCGACGTCGCTGTCGTCGCTGTCGTCGGTCGACGCCGCCGCCGCCAAGCCCGCCGCCTACGCCGGCCTC
GTCGACACGTACGGCAACTCGTTCACGCCGCCCGACTTCACCATCAAGGACATACGCGACGCCATCCCCCGCCAC
TGCTTCGAGCGCTCCGCCCTGCGCGGCTACGGCTACATCCTGCGCGACCTGGCCTGCCTCGCCGCCACCTTCCTC
GTCTTCCACAACCTCGTCACCCCTGACCGCGTGCCCTCGACGCCGCTGCGCGCCCTGCTCTGGGGCCTCTACTCC
CTGCTGCAGGGCCTCTTCGCCACCGGCCTCTGGGTCATCGCCCACGAGTGCGGCCACGGCGCCTTCTCCGACTCG
CGCCTCGTCAACGACCTGACCGGCTGGCTACTGCACTCCTCCCTGCTCGTCCCCTACTTCAGCTGGCAAATCTCC
CACGGCAAGCACCACAAGGCCACCGGCAACATGGAGCGCGACATGGTCTTCGTGCCCCGCACCCGCGACCAGCAG
GCCACCCGCCTCGGCCGCATGGTCCACGAGCTGGGCGAGCTCGCCGAGGAGACGCCCGCCTACACCCTGCTCATG
CTCGTGCTGCAGCAGCTCGTCGGCTGGCCCAACTACCTCCTGACCAACGTCACCGGCCACAACTTCCACCACCGT
CAGCGCGAGGGCCGCGGCCGCGGCAAGGCCAACGGCTTCGGCGGCCGCGTCAACCACTTCGACCCCGCCAGCCCG
CTCTACGAGCACAAGGACGCCAAGCTCATCGTCCTCAGCGACCTCGGCATCGCCATCGCCGCCGCCGCCCTCTTC
TACCTCGGCAACCGTTTCGGCTGGGCCAACATGGCCGTCTGGTACTTTGTCCCCTATCTCTGGGTCAACCACTGG
CTCGTCGCCATCACCTTCCTGCAGCACACCGACCCCTCCCTGCCGCACTACACGGCCGACGAGTGGAACTTCGTC
CGCGGCGCCGCCGCCACCATCGACCGTGAGATGGGCTTCGTCGGCCGCCACCTGCTGCACGGCATCATCGAGACG
CACGTCCTGCATCACTACGTCAGCACCATTCCCTTCTACAACGCCGACGAGGCCTCCGATGCCATCCGCCCCATC
ATGGGCAAGCACTACCGCTCCGACACCGAGGGCGGGCCCTGGGGCTTCATCCGCGCCCTGTGGCGGAGCGCCCGC
ATGTGTCAGTGGGTCGAGCCCAGCGCCGACGCCGAGGGCCCCGGAAAGGGCATTCTCTTCTTCCGTAACGGCAAC
GGCCTGGGCACGAAGCCCGTCTCCATGAAGTCCGAATGA
Transcript >Hirsu2|1292
ATGGCCTCGTCCTCGTCGGCCGCCGCCGCCGCCGCCGCCCTCTCGTCGTCGGGCGGCAAGGCGGTGCTGCGGCGC
AGCTTGACGTCGGCCACGGCCACCGACACGGAGTCGTCGGCCGCCGTCTCGCCCTCGGACTCGCCCCGGCCCTCG
CCCTCGTCGACGTCGCTGTCGTCGCTGTCGTCGGTCGACGCCGCCGCCGCCAAGCCCGCCGCCTACGCCGGCCTC
GTCGACACGTACGGCAACTCGTTCACGCCGCCCGACTTCACCATCAAGGACATACGCGACGCCATCCCCCGCCAC
TGCTTCGAGCGCTCCGCCCTGCGCGGCTACGGCTACATCCTGCGCGACCTGGCCTGCCTCGCCGCCACCTTCCTC
GTCTTCCACAACCTCGTCACCCCTGACCGCGTGCCCTCGACGCCGCTGCGCGCCCTGCTCTGGGGCCTCTACTCC
CTGCTGCAGGGCCTCTTCGCCACCGGCCTCTGGGTCATCGCCCACGAGTGCGGCCACGGCGCCTTCTCCGACTCG
CGCCTCGTCAACGACCTGACCGGCTGGCTACTGCACTCCTCCCTGCTCGTCCCCTACTTCAGCTGGCAAATCTCC
CACGGCAAGCACCACAAGGCCACCGGCAACATGGAGCGCGACATGGTCTTCGTGCCCCGCACCCGCGACCAGCAG
GCCACCCGCCTCGGCCGCATGGTCCACGAGCTGGGCGAGCTCGCCGAGGAGACGCCCGCCTACACCCTGCTCATG
CTCGTGCTGCAGCAGCTCGTCGGCTGGCCCAACTACCTCCTGACCAACGTCACCGGCCACAACTTCCACCACCGT
CAGCGCGAGGGCCGCGGCCGCGGCAAGGCCAACGGCTTCGGCGGCCGCGTCAACCACTTCGACCCCGCCAGCCCG
CTCTACGAGCACAAGGACGCCAAGCTCATCGTCCTCAGCGACCTCGGCATCGCCATCGCCGCCGCCGCCCTCTTC
TACCTCGGCAACCGTTTCGGCTGGGCCAACATGGCCGTCTGGTACTTTGTCCCCTATCTCTGGGTCAACCACTGG
CTCGTCGCCATCACCTTCCTGCAGCACACCGACCCCTCCCTGCCGCACTACACGGCCGACGAGTGGAACTTCGTC
CGCGGCGCCGCCGCCACCATCGACCGTGAGATGGGCTTCGTCGGCCGCCACCTGCTGCACGGCATCATCGAGACG
CACGTCCTGCATCACTACGTCAGCACCATTCCCTTCTACAACGCCGACGAGGCCTCCGATGCCATCCGCCCCATC
ATGGGCAAGCACTACCGCTCCGACACCGAGGGCGGGCCCTGGGGCTTCATCCGCGCCCTGTGGCGGAGCGCCCGC
ATGTGTCAGTGGGTCGAGCCCAGCGCCGACGCCGAGGGCCCCGGAAAGGGCATTCTCTTCTTCCGTAACGGCAAC
GGCCTGGGCACGAAGCCCGTCTCCATGAAGTCCGAATGA
Gene >Hirsu2|1292
ATGGCCTCGTCCTCGTCGGCCGCCGCCGCCGCCGCCGCCCTCTCGTCGTCGGGCGGCAAGGCGGTGCTGCGGCGC
AGCTTGACGTCGGCCACGGCCACCGACACGGAGTCGTCGGCCGCCGTCTCGCCCTCGGACTCGCCCCGGCCCTCG
CCCTCGTCGACGTCGCTGTCGTCGCTGTCGTCGGTCGACGCCGCCGCCGCCAAGCCCGCCGCCTACGCCGGCCTC
GTCGACACGTACGGCAACTCGTTCACGCCGCCCGACTTCACCATCAAGGACATACGCGACGCCATCCCCCGCCAC
TGCTTCGAGCGCTCCGCCCTGCGCGGCTACGGCTACATCCTGCGCGACCTGGCCTGCCTCGCCGCCACCTTCCTC
GTCTTCCACAACCTCGTCACCCCTGACCGCGTGCCCTCGACGCCGCTGCGCGCCCTGCTCTGGGGCCTCTACTCC
CTGCTGCAGGGCCTCTTCGCCACCGGCCTCTGGGTCATCGCCCACGAGTGCGGCCACGGCGCCTTCTCCGACTCG
CGCCTCGTCAACGACCTGACCGGCTGGCTACTGCACTCCTCCCTGCTCGTCCCCTACTTCAGCTGGCAAATCTCC
CACGGCAAGCACCACAAGGCCACCGGCAACATGGAGCGCGACATGGTCTTCGTGCCCCGCACCCGCGACCAGCAG
GCCACCCGCCTCGGCCGCATGGTCCACGAGCTGGGCGAGCTCGCCGAGGAGACGCCCGCCTACACCCTGCTCATG
CTCGTGCTGCAGCAGCTCGTCGGCTGGCCCAACTACCTCCTGACCAACGTCACCGGCCACAACTTCCACCACCGT
CAGCGCGAGGGCCGCGGCCGCGGCAAGGCCAACGGCTTCGGCGGCCGCGTCAACCACTTCGACCCCGCCAGCCCG
CTCTACGAGCACAAGGACGCCAAGCTCATCGTCCTCAGCGACCTCGGCATCGCCATCGCCGCCGCCGCCCTCTTC
TACCTCGGCAACCGTTTCGGCTGGGCCAACATGGCCGTCTGGTACTTTGTCCCCTATCTCTGGGTCAACCACTGG
CTCGGTTCGTCGCTCCTTTTTTTTTTTTTCCTCCTCCTCTTTCTCCTTGTCGTGCGTGTCGACCGTCGTCGTCGT
CGTCGTCGTCGTCTTGCGCTGTCGTGATCGTGGCCGTGCTCGACGTCGTCGTCATCGCCATCGAGGTCCTTGTCG
TCCCGTGCGCTGGCTAACCCTCACCCCCGTCTCGTCACAGTCGCCATCACCTTCCTGCAGCACACCGACCCCTCC
CTGCCGCACTACACGGCCGACGAGTGGAACTTCGTCCGCGGCGCCGCCGCCACCATCGACCGTGAGATGGGCTTC
GTCGGCCGCCACCTGCTGCACGGCATCATCGAGACGCACGTCCTGCATCACTACGTCAGCACCATTCCCTTCTAC
AACGCCGACGAGGCCTCCGATGCCATCCGCCCCATCATGGGCAAGCACTACCGCTCCGACACCGAGGGCGGGCCC
TGGGGCTTCATCCGCGCCCTGTGGCGGAGCGCCCGCATGTGTCAGTGGGTCGAGCCCAGCGCCGACGCCGAGGGC
CCCGGAAAGGGCATTCTCTTCTTCCGTAACGGCAACGGCCTGGGCACGAAGCCCGTCTCCATGAAGTCCGAATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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