Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1289
Gene name
LocationContig_1280:4561..5737
Strand-
Gene length (bp)1176
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12955 DUF3844 Domain of unknown function (DUF3844) 1.0E-35 263 366

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74728|YH93_SCHPO Uncharacterized endoplasmic reticulum membrane protein C1709.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1709.03 PE=3 SV=2 169 364 5.0E-18

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.0959 0.0721 0.106 0.2449 0.1959 0.0276 0.8476 0.4539 0.57 0.0137

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.929035

Transmembrane Domains

Domain # Start End Length
1 327 349 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4896
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|424
Ophiocordyceps australis map64 (Brazil) OphauB2|24
Ophiocordyceps camponoti-floridani Ophcf2|02701
Ophiocordyceps camponoti-rufipedis Ophun1|2730
Ophiocordyceps kimflemingae Ophio5|1841
Ophiocordyceps subramaniannii Hirsu2|1289 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1289
MKLNAGLVAASCGLALASQPAAEVYLLPAREASSTATSLPAALARLVLLQRLAPTDQGPSSSDFPKDTSVEEVVS
ALNRFGKSTPPLFADGDDKAPSQLVVMLEGMTRGQMDDLGRTLGKGPAMTIPNPPSTSAHNDLVDFDFYGTGATN
AAGCKAQQITNPHEKCWGGKQSAYAKLDFEKDSTLVGDVLQSLKKVSQRELQTTLVLLPSTANSGSWSDRSRELR
RRQAEQVMTSVDQAAQAAVTNTAQNAYVLAPAQRILSCFPNENECASTTNNCSGHGSCMDKYAKEDGSTSKDACF
VCHCLSTRSESGSLTHWAGQTCAKKDVSVAFWLFAGFTLALVGIVWLAISMLLNVGQEKLPGVIGAGVSRSR*
Coding >Hirsu2|1289
ATGAAGCTGAACGCCGGGCTCGTTGCGGCCTCTTGCGGCCTCGCCCTGGCCTCGCAGCCAGCGGCCGAGGTCTAC
CTCCTGCCGGCCCGCGAGGCCTCGTCGACGGCGACGTCTCTGCCCGCCGCCCTGGCGCGCCTGGTGCTGCTGCAG
CGGCTGGCGCCCACCGACCAGGGCCCTTCGTCCAGCGACTTCCCCAAGGACACGAGCGTCGAAGAGGTCGTTTCC
GCGCTCAACCGGTTCGGGAAGTCTACCCCGCCGCTGTTCGCCGACGGCGACGACAAGGCGCCCAGCCAGCTCGTC
GTGATGCTGGAGGGCATGACGAGGGGGCAGATGGACGACTTGGGGCGCACGCTGGGCAAGGGGCCGGCCATGACG
ATTCCGAACCCGCCATCTACCAGCGCCCACAACGACCTTGTGGACTTTGATTTCTACGGCACCGGGGCAACGAAT
GCCGCCGGCTGCAAGGCGCAGCAGATCACCAACCCACACGAGAAATGCTGGGGCGGCAAGCAATCCGCCTATGCA
AAATTGGACTTCGAAAAGGACTCGACGCTTGTCGGTGACGTACTGCAAAGCCTGAAGAAGGTCTCGCAGCGTGAA
CTGCAGACGACACTGGTGCTGTTGCCCTCGACGGCAAACTCGGGCTCGTGGTCGGACCGGTCCCGAGAGCTGCGG
CGCCGGCAGGCGGAGCAGGTCATGACCTCGGTGGACCAGGCGGCGCAAGCAGCTGTGACGAACACGGCGCAGAAC
GCGTACGTGTTGGCGCCCGCGCAGCGCATCCTGTCGTGCTTCCCCAACGAGAACGAATGCGCCAGCACGACGAAC
AACTGCTCGGGCCACGGGTCGTGCATGGACAAGTATGCCAAGGAGGACGGGTCGACCAGCAAGGACGCCTGCTTC
GTCTGCCACTGCCTGAGCACCCGCAGCGAGTCCGGCAGCCTGACGCACTGGGCCGGGCAGACGTGTGCGAAGAAG
GACGTGAGCGTTGCCTTTTGGCTCTTTGCCGGCTTCACCCTTGCCCTGGTCGGCATCGTGTGGCTGGCGATCTCG
ATGCTGTTGAACGTCGGCCAGGAGAAGCTTCCAGGCGTCATCGGTGCGGGCGTCTCGCGGTCCAGATAG
Transcript >Hirsu2|1289
ATGAAGCTGAACGCCGGGCTCGTTGCGGCCTCTTGCGGCCTCGCCCTGGCCTCGCAGCCAGCGGCCGAGGTCTAC
CTCCTGCCGGCCCGCGAGGCCTCGTCGACGGCGACGTCTCTGCCCGCCGCCCTGGCGCGCCTGGTGCTGCTGCAG
CGGCTGGCGCCCACCGACCAGGGCCCTTCGTCCAGCGACTTCCCCAAGGACACGAGCGTCGAAGAGGTCGTTTCC
GCGCTCAACCGGTTCGGGAAGTCTACCCCGCCGCTGTTCGCCGACGGCGACGACAAGGCGCCCAGCCAGCTCGTC
GTGATGCTGGAGGGCATGACGAGGGGGCAGATGGACGACTTGGGGCGCACGCTGGGCAAGGGGCCGGCCATGACG
ATTCCGAACCCGCCATCTACCAGCGCCCACAACGACCTTGTGGACTTTGATTTCTACGGCACCGGGGCAACGAAT
GCCGCCGGCTGCAAGGCGCAGCAGATCACCAACCCACACGAGAAATGCTGGGGCGGCAAGCAATCCGCCTATGCA
AAATTGGACTTCGAAAAGGACTCGACGCTTGTCGGTGACGTACTGCAAAGCCTGAAGAAGGTCTCGCAGCGTGAA
CTGCAGACGACACTGGTGCTGTTGCCCTCGACGGCAAACTCGGGCTCGTGGTCGGACCGGTCCCGAGAGCTGCGG
CGCCGGCAGGCGGAGCAGGTCATGACCTCGGTGGACCAGGCGGCGCAAGCAGCTGTGACGAACACGGCGCAGAAC
GCGTACGTGTTGGCGCCCGCGCAGCGCATCCTGTCGTGCTTCCCCAACGAGAACGAATGCGCCAGCACGACGAAC
AACTGCTCGGGCCACGGGTCGTGCATGGACAAGTATGCCAAGGAGGACGGGTCGACCAGCAAGGACGCCTGCTTC
GTCTGCCACTGCCTGAGCACCCGCAGCGAGTCCGGCAGCCTGACGCACTGGGCCGGGCAGACGTGTGCGAAGAAG
GACGTGAGCGTTGCCTTTTGGCTCTTTGCCGGCTTCACCCTTGCCCTGGTCGGCATCGTGTGGCTGGCGATCTCG
ATGCTGTTGAACGTCGGCCAGGAGAAGCTTCCAGGCGTCATCGGTGCGGGCGTCTCGCGGTCCAGATAG
Gene >Hirsu2|1289
ATGAAGCTGAACGCCGGGCTCGTTGCGGCCTCTTGCGGCCTCGCCCTGGCCTCGCAGCCAGCGGCCGAGGTCTAC
CTCCTGCCGGCCCGCGAGGCCTCGTCGACGGCGACGTCTCTGCCCGCCGCCCTGGCGCGCCTGGTGCTGCTGCAG
CGGCTGGCGCCCACCGACCAGGGCCCTTCGTCCAGCGACTTCCCCAAGGACACGAGCGTCGAAGAGGTCGTTTCC
GCGCTCAACCGGTTCGGGAAGTCTACCCCGCCGCTGTTCGCCGACGGCGACGACAAGGCGCCCAGCCAGCTCGTC
GTGATGCTGGAGGGCATGACGAGGGGGCAGATGGACGACTTGGGGCGCACGCTGGGCAAGGGGCCGGCCATGACG
ATTCCGAACCCGCCATCTACCAGCGCCCACAACGACCTTGTGGACTTTGATTTCTACGGCACCGGGGCAACGAAT
GCCGCCGGCTGCAAGGCGCAGCAGATCACCAACCCACACGAGAAATGCTGGGGCGGCAAGCAATCCGCCTATGCA
AAATTGGACTTCGAAAAGGTAGGCTCGAGCATGGGTACCAACAATGCGTGGGGCTGACGAGATGGTGGTCGGCAG
GACTCGACGCTTGTCGGTGACGTACTGCAAAGCCTGAAGAAGGTCTCGCAGCGTGAACTGCAGACGACACTGGTG
CTGTTGCCCTCGACGGCAAACTCGGGCTCGTGGTCGGACCGGTCCCGAGAGCTGCGGCGCCGGCAGGCGGAGCAG
GTCATGACCTCGGTGGACCAGGCGGCGCAAGCAGCTGTGACGAACACGGCGCAGAACGCGTACGTGTTGGCGCCC
GCGCAGCGCATCCTGTCGTGCTTCCCCAACGAGAACGAATGCGCCAGCACGACGAACAACTGCTCGGGCCACGGG
TCGTGCATGGACAAGTATGCCAAGGAGGACGGGTCGACCAGCAAGGACGCCTGCTTCGTCTGCCACTGCCTGAGC
ACCCGCAGCGAGTCCGGCAGCCTGACGCACTGGGCCGGGCAGACGTGTGCGAAGAAGGACGTGAGCGTTGCCTTT
TGGCTCTTTGCCGGCTTCACCCTTGCCCTGGTCGGCATCGTGTGGCTGGCGATCTCGATGCTGTTGAACGTCGGC
CAGGAGAAGCTTCCAGGCGTCATCGGTGCGGGCGTCTCGCGGTCCAGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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