© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|127 |
| Gene name | |
| Location | Contig_102:12539..13541 |
| Strand | - |
| Gene length (bp) | 1002 |
| Transcript length (bp) | 1002 |
| Coding sequence length (bp) | 1002 |
| Protein length (aa) | 334 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1 | 0.0825 | 0.9351 | 0.1016 | 0.038 | 0.0187 | 0.1704 | 0.1503 | 0.0653 | 0.016 |
| Orthofinder run ID | 4 |
| Orthogroup | 6031 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|7477 |
| Ophiocordyceps subramaniannii | Hirsu2|127 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|5960 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|127 MPTLSLKSILAFGALAGASAVANIQSRQDSLQQYRTQIKELNKYIADGIKCYTEFVPQVKASNPPKRTVLKSIEK CNILYDNGAIKLRDAHRTAQARNFQSDKLHEMGLANVLDARLEHQGEYTRKLQEALQELHDRSKEAVDAFDAGTN STIRVALELKKVAEEQRIDVSKAKIERKSSADGGPLIEVAGVLVAGVAVFGAITYGPFIEATTAAAEGIEALDTA IETATSHVSATQNAVTTDLNSVTIGQLNQARQALEEVSIHVEAAHDNVDALHAVLAEVPEAEADEANVVVHVKAA ELNTAIGQYNNLRAALMQIRQTVVQSITPITDI* |
| Coding | >Hirsu2|127 ATGCCCACCCTCTCGTTGAAATCCATCTTGGCCTTTGGGGCTCTGGCCGGCGCCTCCGCCGTGGCCAACATACAG AGCCGCCAGGATTCCCTGCAGCAGTACCGGACACAAATCAAAGAGTTGAACAAGTACATCGCCGATGGCATCAAG TGCTACACCGAATTCGTGCCCCAGGTCAAAGCCAGCAATCCTCCCAAGCGAACGGTCCTCAAAAGCATCGAAAAA TGCAACATCCTGTATGACAACGGCGCCATCAAGCTCAGGGACGCCCACAGGACGGCCCAAGCCCGCAATTTTCAG AGCGACAAGCTCCATGAGATGGGGCTCGCCAACGTGCTCGACGCCCGTCTAGAGCATCAGGGCGAGTATACCCGG AAACTGCAGGAGGCTCTGCAGGAGCTCCACGACCGTTCCAAGGAAGCCGTCGACGCGTTCGACGCGGGGACGAAC AGCACGATCAGGGTCGCTCTGGAGCTGAAGAAGGTGGCCGAGGAGCAGAGGATCGACGTGTCCAAGGCCAAGATC GAGAGGAAGTCGTCTGCGGACGGGGGCCCGCTCATAGAGGTGGCGGGCGTCTTGGTCGCGGGCGTGGCCGTCTTC GGCGCCATCACCTACGGGCCCTTCATCGAGGCCACCACCGCTGCGGCCGAGGGCATCGAAGCGCTCGATACCGCC ATCGAGACGGCTACGAGCCACGTCAGCGCAACGCAGAACGCGGTCACGACCGACCTCAACTCTGTAACCATCGGC CAGCTGAACCAAGCCCGCCAGGCGCTGGAGGAGGTTTCTATCCACGTGGAGGCCGCCCACGATAACGTGGACGCG CTCCACGCGGTGCTGGCTGAAGTCCCGGAAGCGGAAGCTGATGAGGCGAACGTCGTGGTGCATGTCAAGGCCGCC GAGCTGAACACGGCCATCGGTCAATATAACAATCTGCGCGCCGCCCTCATGCAGATCAGGCAGACTGTCGTGCAG TCCATCACGCCTATAACCGATATATAG |
| Transcript | >Hirsu2|127 ATGCCCACCCTCTCGTTGAAATCCATCTTGGCCTTTGGGGCTCTGGCCGGCGCCTCCGCCGTGGCCAACATACAG AGCCGCCAGGATTCCCTGCAGCAGTACCGGACACAAATCAAAGAGTTGAACAAGTACATCGCCGATGGCATCAAG TGCTACACCGAATTCGTGCCCCAGGTCAAAGCCAGCAATCCTCCCAAGCGAACGGTCCTCAAAAGCATCGAAAAA TGCAACATCCTGTATGACAACGGCGCCATCAAGCTCAGGGACGCCCACAGGACGGCCCAAGCCCGCAATTTTCAG AGCGACAAGCTCCATGAGATGGGGCTCGCCAACGTGCTCGACGCCCGTCTAGAGCATCAGGGCGAGTATACCCGG AAACTGCAGGAGGCTCTGCAGGAGCTCCACGACCGTTCCAAGGAAGCCGTCGACGCGTTCGACGCGGGGACGAAC AGCACGATCAGGGTCGCTCTGGAGCTGAAGAAGGTGGCCGAGGAGCAGAGGATCGACGTGTCCAAGGCCAAGATC GAGAGGAAGTCGTCTGCGGACGGGGGCCCGCTCATAGAGGTGGCGGGCGTCTTGGTCGCGGGCGTGGCCGTCTTC GGCGCCATCACCTACGGGCCCTTCATCGAGGCCACCACCGCTGCGGCCGAGGGCATCGAAGCGCTCGATACCGCC ATCGAGACGGCTACGAGCCACGTCAGCGCAACGCAGAACGCGGTCACGACCGACCTCAACTCTGTAACCATCGGC CAGCTGAACCAAGCCCGCCAGGCGCTGGAGGAGGTTTCTATCCACGTGGAGGCCGCCCACGATAACGTGGACGCG CTCCACGCGGTGCTGGCTGAAGTCCCGGAAGCGGAAGCTGATGAGGCGAACGTCGTGGTGCATGTCAAGGCCGCC GAGCTGAACACGGCCATCGGTCAATATAACAATCTGCGCGCCGCCCTCATGCAGATCAGGCAGACTGTCGTGCAG TCCATCACGCCTATAACCGATATATAG |
| Gene | >Hirsu2|127 ATGCCCACCCTCTCGTTGAAATCCATCTTGGCCTTTGGGGCTCTGGCCGGCGCCTCCGCCGTGGCCAACATACAG AGCCGCCAGGATTCCCTGCAGCAGTACCGGACACAAATCAAAGAGTTGAACAAGTACATCGCCGATGGCATCAAG TGCTACACCGAATTCGTGCCCCAGGTCAAAGCCAGCAATCCTCCCAAGCGAACGGTCCTCAAAAGCATCGAAAAA TGCAACATCCTGTATGACAACGGCGCCATCAAGCTCAGGGACGCCCACAGGACGGCCCAAGCCCGCAATTTTCAG AGCGACAAGCTCCATGAGATGGGGCTCGCCAACGTGCTCGACGCCCGTCTAGAGCATCAGGGCGAGTATACCCGG AAACTGCAGGAGGCTCTGCAGGAGCTCCACGACCGTTCCAAGGAAGCCGTCGACGCGTTCGACGCGGGGACGAAC AGCACGATCAGGGTCGCTCTGGAGCTGAAGAAGGTGGCCGAGGAGCAGAGGATCGACGTGTCCAAGGCCAAGATC GAGAGGAAGTCGTCTGCGGACGGGGGCCCGCTCATAGAGGTGGCGGGCGTCTTGGTCGCGGGCGTGGCCGTCTTC GGCGCCATCACCTACGGGCCCTTCATCGAGGCCACCACCGCTGCGGCCGAGGGCATCGAAGCGCTCGATACCGCC ATCGAGACGGCTACGAGCCACGTCAGCGCAACGCAGAACGCGGTCACGACCGACCTCAACTCTGTAACCATCGGC CAGCTGAACCAAGCCCGCCAGGCGCTGGAGGAGGTTTCTATCCACGTGGAGGCCGCCCACGATAACGTGGACGCG CTCCACGCGGTGCTGGCTGAAGTCCCGGAAGCGGAAGCTGATGAGGCGAACGTCGTGGTGCATGTCAAGGCCGCC GAGCTGAACACGGCCATCGGTCAATATAACAATCTGCGCGCCGCCCTCATGCAGATCAGGCAGACTGTCGTGCAG TCCATCACGCCTATAACCGATATATAG |