© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1266 |
| Gene name | |
| Location | Contig_1278:2692..4379 |
| Strand | - |
| Gene length (bp) | 1687 |
| Transcript length (bp) | 1554 |
| Coding sequence length (bp) | 1554 |
| Protein length (aa) | 518 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.4E-18 | 46 | 187 |
| PF08031 | BBE | Berberine and berberine like | 7.4E-08 | 450 | 493 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 5 | 505 | 6.0E-147 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 24 | 496 | 2.0E-58 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 38 | 219 | 7.0E-10 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 112 | 487 | 2.0E-09 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 50 | 247 | 3.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 5 | 505 | 6.0E-147 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 24 | 496 | 2.0E-58 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 38 | 219 | 7.0E-10 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 112 | 487 | 2.0E-09 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 50 | 247 | 3.0E-07 |
| sp|Q9FZC6|FOX3_ARATH | Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 | 20 | 229 | 5.0E-07 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 50 | 229 | 6.0E-07 |
| sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 50 | 229 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0050662 | coenzyme binding | No |
| GO:0005488 | binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0008150 | biological_process | No |
| GO:0048037 | cofactor binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1266 MPRPEPGAVQWTNWEAWPERNESCFFDSPRDIPCRQGRVSLYSALVEAPGHIQAAVRFAAKHRLRLAIKNSGHCF LGRSSAPESLQISTHKLKSIRFTSRFLPAGAPRGQAHEGPAVTVGAGVGLKELYSAVARRNLTVVAGLAHTVGIA GGYIQGGGHSPLGNWKGMGSDNALEFRVVNAKGDLIVANDHQNRDLFWALRGGGGGTYGVVVSVAVRTFPDVPMV GTEFGFAVPKGDLPAYWDMVEVFHTHLNSISDAGGCGYYSVAPKPQAQNGTEVLLLSGGFLFLNESRTETARKAM DPLVADMRRLAAPGSTYRVDAVPRVSEWFDIALKGDADTTGGILLSGSRLVSRNFLSRNDGPAHLSKALRSISES MPAIGFLGHVVAGGAVARSTVDSALNPAWRRTVTHIAFGVDWNSTTPLVEQEAIRSQLTEIGVEGLRRLEPDMGA YLNEADAYEKDFQRSFWGENYARLYDIKQEQDPFGLFIVRKGVGSEDWDDAGLCRVDNRGRLRRLPE* |
| Coding | >Hirsu2|1266 ATGCCACGCCCCGAGCCCGGTGCGGTGCAGTGGACCAACTGGGAGGCATGGCCGGAGCGCAACGAGAGCTGTTTC TTCGACAGCCCGAGAGACATACCCTGCCGCCAGGGCCGCGTCTCGCTCTACTCAGCCCTGGTCGAGGCGCCTGGC CACATCCAGGCCGCCGTACGATTCGCGGCCAAGCACCGTCTCCGTCTTGCCATCAAGAACTCGGGCCACTGCTTC CTGGGCCGCTCGTCCGCTCCCGAATCGCTGCAGATCTCAACCCACAAGCTGAAGAGCATCCGGTTCACCAGCCGC TTCCTCCCGGCCGGTGCGCCTCGAGGCCAGGCCCACGAGGGCCCCGCCGTCACCGTTGGCGCCGGAGTCGGCCTC AAGGAGCTGTACTCTGCCGTCGCGAGGCGCAATCTGACCGTCGTTGCAGGCCTGGCACACACTGTCGGTATTGCA GGCGGCTACATCCAAGGCGGCGGCCATAGTCCGCTTGGAAACTGGAAAGGAATGGGCTCCGACAATGCTCTAGAG TTTCGAGTCGTCAACGCCAAGGGAGATCTGATAGTGGCCAACGACCACCAAAACAGAGACCTGTTCTGGGCGCTG CGAGGCGGCGGCGGCGGCACCTATGGCGTCGTCGTGAGCGTTGCGGTCCGGACCTTTCCCGACGTGCCCATGGTG GGGACCGAGTTCGGATTTGCAGTCCCCAAGGGAGACCTGCCGGCTTACTGGGACATGGTAGAGGTCTTTCACACT CACCTCAACAGCATATCGGATGCAGGCGGATGCGGCTACTACTCCGTCGCACCCAAGCCGCAGGCGCAGAACGGC ACGGAAGTCCTCCTCCTTTCTGGCGGCTTCTTGTTCCTCAATGAAAGCCGGACGGAGACGGCTCGCAAGGCCATG GATCCGTTGGTGGCAGACATGCGTCGACTTGCCGCGCCAGGCTCGACATATCGCGTCGACGCAGTGCCGCGAGTG TCTGAGTGGTTCGACATTGCTCTCAAGGGGGATGCCGACACGACGGGAGGCATTCTCCTTTCCGGGTCCCGGCTG GTCTCGCGCAACTTTCTCTCCCGAAACGACGGCCCTGCACACCTCAGCAAGGCCCTGCGGTCCATCAGCGAGAGC ATGCCGGCCATTGGCTTCCTCGGCCACGTCGTCGCCGGCGGGGCCGTGGCCCGAAGCACAGTCGACTCAGCCTTG AACCCGGCGTGGAGGAGGACGGTAACGCACATTGCCTTTGGTGTCGACTGGAACAGTACCACGCCTCTCGTGGAG CAAGAAGCCATCCGCAGCCAGCTGACGGAAATCGGAGTCGAGGGGCTGCGACGCTTGGAACCGGACATGGGGGCG TATCTCAACGAGGCGGACGCCTATGAGAAGGACTTTCAGCGGTCTTTTTGGGGCGAAAACTACGCGCGCTTGTAC GACATCAAGCAGGAGCAGGACCCTTTCGGCCTGTTCATCGTGCGCAAGGGGGTGGGTAGCGAAGATTGGGATGAC GCCGGTCTCTGCAGGGTCGACAACAGAGGCCGGCTCCGTCGCCTGCCGGAATAG |
| Transcript | >Hirsu2|1266 ATGCCACGCCCCGAGCCCGGTGCGGTGCAGTGGACCAACTGGGAGGCATGGCCGGAGCGCAACGAGAGCTGTTTC TTCGACAGCCCGAGAGACATACCCTGCCGCCAGGGCCGCGTCTCGCTCTACTCAGCCCTGGTCGAGGCGCCTGGC CACATCCAGGCCGCCGTACGATTCGCGGCCAAGCACCGTCTCCGTCTTGCCATCAAGAACTCGGGCCACTGCTTC CTGGGCCGCTCGTCCGCTCCCGAATCGCTGCAGATCTCAACCCACAAGCTGAAGAGCATCCGGTTCACCAGCCGC TTCCTCCCGGCCGGTGCGCCTCGAGGCCAGGCCCACGAGGGCCCCGCCGTCACCGTTGGCGCCGGAGTCGGCCTC AAGGAGCTGTACTCTGCCGTCGCGAGGCGCAATCTGACCGTCGTTGCAGGCCTGGCACACACTGTCGGTATTGCA GGCGGCTACATCCAAGGCGGCGGCCATAGTCCGCTTGGAAACTGGAAAGGAATGGGCTCCGACAATGCTCTAGAG TTTCGAGTCGTCAACGCCAAGGGAGATCTGATAGTGGCCAACGACCACCAAAACAGAGACCTGTTCTGGGCGCTG CGAGGCGGCGGCGGCGGCACCTATGGCGTCGTCGTGAGCGTTGCGGTCCGGACCTTTCCCGACGTGCCCATGGTG GGGACCGAGTTCGGATTTGCAGTCCCCAAGGGAGACCTGCCGGCTTACTGGGACATGGTAGAGGTCTTTCACACT CACCTCAACAGCATATCGGATGCAGGCGGATGCGGCTACTACTCCGTCGCACCCAAGCCGCAGGCGCAGAACGGC ACGGAAGTCCTCCTCCTTTCTGGCGGCTTCTTGTTCCTCAATGAAAGCCGGACGGAGACGGCTCGCAAGGCCATG GATCCGTTGGTGGCAGACATGCGTCGACTTGCCGCGCCAGGCTCGACATATCGCGTCGACGCAGTGCCGCGAGTG TCTGAGTGGTTCGACATTGCTCTCAAGGGGGATGCCGACACGACGGGAGGCATTCTCCTTTCCGGGTCCCGGCTG GTCTCGCGCAACTTTCTCTCCCGAAACGACGGCCCTGCACACCTCAGCAAGGCCCTGCGGTCCATCAGCGAGAGC ATGCCGGCCATTGGCTTCCTCGGCCACGTCGTCGCCGGCGGGGCCGTGGCCCGAAGCACAGTCGACTCAGCCTTG AACCCGGCGTGGAGGAGGACGGTAACGCACATTGCCTTTGGTGTCGACTGGAACAGTACCACGCCTCTCGTGGAG CAAGAAGCCATCCGCAGCCAGCTGACGGAAATCGGAGTCGAGGGGCTGCGACGCTTGGAACCGGACATGGGGGCG TATCTCAACGAGGCGGACGCCTATGAGAAGGACTTTCAGCGGTCTTTTTGGGGCGAAAACTACGCGCGCTTGTAC GACATCAAGCAGGAGCAGGACCCTTTCGGCCTGTTCATCGTGCGCAAGGGGGTGGGTAGCGAAGATTGGGATGAC GCCGGTCTCTGCAGGGTCGACAACAGAGGCCGGCTCCGTCGCCTGCCGGAATAG |
| Gene | >Hirsu2|1266 ATGCCACGCCCCGAGGTTTGATTCCGTTGCCTGCAACGCGTCCGCGGCCAAGTCTCCCGACTCTCTCTGGCGTGC CTCGCAGCCCGGTGCGGTGCAGTGGACCAACTGGGAGGCATGGCCGGAGCGCAACGAGAGCTGTTTCTTCGACAG CCCGAGAGACATACCCTGCCGCCAGGGCCGCGTCTCGCTCTACTCAGCCCTGGTCGAGGCGCCTGGCCACATCCA GGCCGCCGTACGATTCGCGGCCAAGCACCGTCTCCGTCTTGCCATCAAGAACTCGGGCCACTGCTTCCTGGGCCG CTCGTCCGCTCCCGAATCGCTGCAGATCTCAACCCACAAGCTGAAGAGCATCCGGTTCACCAGCCGCTTCCTCCC GGCCGGTGCGCCTCGAGGCCAGGCCCACGAGGGCCCCGCCGTCACCGTTGGCGCCGGAGTCGGCCTCAAGGAGCT GTACTCTGCCGTCGCGAGGCGCAATCTGACCGTCGTTGCAGGCCTGGCACACACTGTCGGTATTGCAGGCGGCTA CATCCAAGGCGGCGGCCATAGTCCGCTTGGAAACTGGAAAGGAATGGGCTCCGACAATGCTCTAGAGTTTCGAGT CGTCAACGCCAAGGTTGGCCGCTCGACCCGCAAAAAGTGCCCCGTGAATTTATGCTGACCCTTGCATCTCGCCGG GAAGGGAGATCTGATAGTGGCCAACGACCACCAAAACAGAGACCTGTTCTGGGCGCTGCGAGGCGGCGGCGGCGG CACCTATGGCGTCGTCGTGAGCGTTGCGGTCCGGACCTTTCCCGACGTGCCCATGGTGGGGACCGAGTTCGGATT TGCAGTCCCCAAGGGAGACCTGCCGGCTTACTGGGACATGGTAGAGGTCTTTCACACTCACCTCAACAGCATATC GGATGCAGGCGGATGCGGCTACTACTCCGTCGCACCCAAGCCGCAGGCGCAGAACGGCACGGAAGTCCTCCTCCT TTCTGGCGGCTTCTTGTTCCTCAATGAAAGCCGGACGGAGACGGCTCGCAAGGCCATGGATCCGTTGGTGGCAGA CATGCGTCGACTTGCCGCGCCAGGCTCGACATATCGCGTCGACGCAGTGCCGCGAGTGTCTGAGTGGTTCGACAT TGCTCTCAAGGGGGATGCCGACACGACGGGAGGCATTCTCCTTTCCGGGTCCCGGCTGGTCTCGCGCAACTTTCT CTCCCGAAACGACGGCCCTGCACACCTCAGCAAGGCCCTGCGGTCCATCAGCGAGAGCATGCCGGCCATTGGCTT CCTCGGCCACGTCGTCGCCGGCGGGGCCGTGGCCCGAAGCACAGTCGACTCAGCCTTGAACCCGGCGTGGAGGAG GACGGTAACGCACATTGCCTTTGGTGTCGACTGGAACAGTACCACGCCTCTCGTGGAGCAAGAAGCCATCCGCAG CCAGCTGACGGAAATCGGAGTCGAGGGGCTGCGACGCTTGGAACCGGACATGGGGGCGTATCTCAACGAGGCGGA CGCCTATGAGAAGGACTTTCAGCGGTCTTTTTGGGGCGAAAACTACGCGCGCTTGTACGACATCAAGCAGGAGCA GGACCCTTTCGGCCTGTTCATCGTGCGCAAGGGGGTGGGTAGCGAAGATTGGGATGACGCCGGTCTCTGCAGGGT CGACAACAGAGGCCGGCTCCGTCGCCTGCCGGAATAG |