Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1257
Gene name
Location	Contig_1274:3929..6277
Strand	+
Gene length (bp)	2348
Transcript length (bp)	2280
Coding sequence length (bp)	2280
Protein length (aa)	760

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06011	TRP	Transient receptor potential (TRP) ion channel	1.1E-164	169	620
PF14558	TRP_N	ML-like domain	8.2E-42	28	164

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	9	740	3.0E-141
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	20	620	2.0E-137
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	11	743	7.0E-135
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	22	623	9.0E-106
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	26	618	1.0E-103

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q08967\|FLC1_YEAST	Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1	9	740	3.0E-141
sp\|P39719\|FLC2_YEAST	Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2	20	620	2.0E-137
sp\|P53121\|FLC3_YEAST	Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1	11	743	7.0E-135
sp\|Q08844\|YO365_YEAST	Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1	22	623	9.0E-106
sp\|Q09917\|PKD2_SCHPO	TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1	26	618	1.0E-103
sp\|O74520\|YCPE_SCHPO	Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2	36	558	7.0E-26

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	345	367	22
2	388	410	22
3	420	442	22
4	482	504	22
5	514	533	19
6	540	562	22
7	572	594	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1257 MRSFLKAPLLLLSSMAAMLSPASGERLLMSSSLNTCQQDSSFTASLFNVVYTPSNNSASINMVATSSVQGKVLFD LAISAYGYQFLRMTLNPCDMDLAGLCPMVAGKIPFGFNLPVGKDAAQRIPAIAYNIPDLDATVRVFVNLTSTGES VACVEADISNGKTVDLVGVKWATAIIAGLALIASAVVNGLGHSNTAAHVAANSLSLFGYFQAQAIVGLTSVHLPP IVQSWTQDFQWSMGIIRVGFMQDIFTWYQRATGGTPSTIFDSLTTVSVQVAKRSLEYADTGLGLFRRGAAMMPRS AAVAAVGRLAKRANVTTGSGAYIVYGIQRVAFRSKIETTNLFMTGLTFFCIFVVLTVLSVAAFKGICELFVRQKW MDKDKFLDFRNGWLTVLKGILFRVALIGFPQMAILCLWEFTQVDSAAEVVLAVFFFFGMALTLAWGATKVIRIAR RSVAMHRNPAYILFSDPQALNKWGFLYIQFRASAYYFIAPVLGYTLIKAMFVAFAQRSNVAQAVGFVIIEAAALI AASVLRPWMDKSTNSFNIAICVINFLNAIFLLIFSNVFGAPSLVVGVVGVVLFVLNAAFSLILLIMVIVSTTVTF FRKNPDARYQVMADDRASFMKSQTQLTTTTELDALAATARGDKAGYKTHLDLDDDNESLASEDLRRRADPNGSQS SQVSFHPVPGGPRSPVNPSMPLFPAGANQRPQSPFRSPSPNNYSRSGSSLAQTRSHNNASPAAYPPGYHPANGAS PWQRGAGYD*
Coding	>Hirsu2\|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGC CCTTGGCAGAGGGGAGCCGGGTACGATTAA
Transcript	>Hirsu2\|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGC CCTTGGCAGAGGGGAGCCGGGTACGATTAA
Gene	>Hirsu2\|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGG TAAGTTTGCCGTCCCTCACCCCTCTCGGCTCACCGAGGGGCACGCGCGGCTGACGGAGCTCCGACAGCCCTTGGC AGAGGGGAGCCGGGTACGATTAA

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