Protein ID | Hirsu2|1257 |
Gene name | |
Location | Contig_1274:3929..6277 |
Strand | + |
Gene length (bp) | 2348 |
Transcript length (bp) | 2280 |
Coding sequence length (bp) | 2280 |
Protein length (aa) | 760 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06011 | TRP | Transient receptor potential (TRP) ion channel | 1.1E-164 | 169 | 620 |
PF14558 | TRP_N | ML-like domain | 8.2E-42 | 28 | 164 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 9 | 740 | 3.0E-141 |
sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 20 | 620 | 2.0E-137 |
sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 11 | 743 | 7.0E-135 |
sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 22 | 623 | 9.0E-106 |
sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 26 | 618 | 1.0E-103 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q08967|FLC1_YEAST | Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 | 9 | 740 | 3.0E-141 |
sp|P39719|FLC2_YEAST | Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 | 20 | 620 | 2.0E-137 |
sp|P53121|FLC3_YEAST | Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 | 11 | 743 | 7.0E-135 |
sp|Q08844|YO365_YEAST | Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 | 22 | 623 | 9.0E-106 |
sp|Q09917|PKD2_SCHPO | TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 | 26 | 618 | 1.0E-103 |
sp|O74520|YCPE_SCHPO | Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2 | 36 | 558 | 7.0E-26 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.0968 | 0.0954 | 0.1167 | 0.5098 | 0.1183 | 0.0094 | 0.526 | 0.5352 | 0.5935 | 0.0054 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999733 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 345 | 367 | 22 |
2 | 388 | 410 | 22 |
3 | 420 | 442 | 22 |
4 | 482 | 504 | 22 |
5 | 514 | 533 | 19 |
6 | 540 | 562 | 22 |
7 | 572 | 594 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 268 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1257 MRSFLKAPLLLLSSMAAMLSPASGERLLMSSSLNTCQQDSSFTASLFNVVYTPSNNSASINMVATSSVQGKVLFD LAISAYGYQFLRMTLNPCDMDLAGLCPMVAGKIPFGFNLPVGKDAAQRIPAIAYNIPDLDATVRVFVNLTSTGES VACVEADISNGKTVDLVGVKWATAIIAGLALIASAVVNGLGHSNTAAHVAANSLSLFGYFQAQAIVGLTSVHLPP IVQSWTQDFQWSMGIIRVGFMQDIFTWYQRATGGTPSTIFDSLTTVSVQVAKRSLEYADTGLGLFRRGAAMMPRS AAVAAVGRLAKRANVTTGSGAYIVYGIQRVAFRSKIETTNLFMTGLTFFCIFVVLTVLSVAAFKGICELFVRQKW MDKDKFLDFRNGWLTVLKGILFRVALIGFPQMAILCLWEFTQVDSAAEVVLAVFFFFGMALTLAWGATKVIRIAR RSVAMHRNPAYILFSDPQALNKWGFLYIQFRASAYYFIAPVLGYTLIKAMFVAFAQRSNVAQAVGFVIIEAAALI AASVLRPWMDKSTNSFNIAICVINFLNAIFLLIFSNVFGAPSLVVGVVGVVLFVLNAAFSLILLIMVIVSTTVTF FRKNPDARYQVMADDRASFMKSQTQLTTTTELDALAATARGDKAGYKTHLDLDDDNESLASEDLRRRADPNGSQS SQVSFHPVPGGPRSPVNPSMPLFPAGANQRPQSPFRSPSPNNYSRSGSSLAQTRSHNNASPAAYPPGYHPANGAS PWQRGAGYD* |
Coding | >Hirsu2|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGC CCTTGGCAGAGGGGAGCCGGGTACGATTAA |
Transcript | >Hirsu2|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGC CCTTGGCAGAGGGGAGCCGGGTACGATTAA |
Gene | >Hirsu2|1257 ATGCGGTCCTTCCTCAAGGCGCCGCTCCTGCTCCTCTCCTCGATGGCGGCGATGCTGTCGCCCGCCTCGGGTGAG AGGTTGCTCATGTCCAGCTCGCTCAACACGTGCCAGCAGGACTCGAGCTTCACCGCCTCGCTCTTCAACGTCGTC TACACGCCCAGCAACAACTCGGCCAGCATCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTCGAC CTGGCCATCTCCGCCTACGGATACCAGTTCCTCCGCATGACGCTCAACCCCTGCGACATGGACCTGGCCGGCCTG TGCCCCATGGTCGCCGGCAAGATCCCCTTCGGCTTCAACCTGCCCGTCGGCAAGGACGCCGCCCAGCGCATCCCC GCCATCGCCTACAACATCCCCGACCTCGACGCCACCGTCCGCGTCTTCGTCAACCTGACGTCGACGGGCGAGAGC GTCGCCTGCGTCGAGGCCGACATCTCCAACGGCAAGACGGTCGACCTCGTCGGCGTCAAGTGGGCCACGGCCATC ATCGCCGGCCTCGCCCTCATCGCCTCGGCCGTCGTCAACGGCCTCGGCCACTCCAACACGGCCGCCCACGTCGCC GCCAACTCCCTCTCCCTCTTCGGCTACTTCCAGGCCCAGGCCATCGTCGGCCTGACCAGCGTCCACCTGCCGCCC ATCGTCCAGTCGTGGACCCAGGACTTCCAGTGGTCCATGGGCATCATCCGCGTCGGCTTCATGCAGGACATCTTC ACCTGGTACCAGCGCGCCACCGGCGGCACGCCCTCGACCATCTTCGACTCCCTCACCACCGTCTCCGTCCAGGTC GCCAAGCGCTCGCTCGAGTACGCCGACACGGGCCTCGGCCTCTTCCGCCGCGGCGCCGCCATGATGCCCCGCTCC GCCGCCGTCGCCGCCGTCGGCCGCCTGGCCAAGCGCGCCAACGTCACGACCGGCTCCGGCGCCTACATCGTCTAC GGCATCCAGCGCGTCGCCTTCCGCTCCAAGATCGAGACGACCAACCTCTTCATGACGGGCCTCACCTTCTTCTGC ATCTTCGTCGTCCTCACCGTCCTCTCCGTCGCCGCCTTCAAGGGCATCTGCGAGCTCTTCGTCCGCCAGAAGTGG ATGGACAAGGACAAGTTCCTCGACTTCCGCAACGGCTGGCTCACCGTCCTCAAGGGCATCCTCTTCCGCGTCGCC CTCATCGGCTTCCCCCAGATGGCCATCCTCTGCCTCTGGGAGTTCACCCAGGTCGACTCCGCCGCCGAGGTCGTC CTCGCCGTCTTCTTCTTCTTCGGCATGGCCCTGACGCTCGCCTGGGGCGCCACCAAGGTCATCCGCATCGCCCGC CGCTCCGTCGCCATGCACCGCAACCCGGCCTACATCCTCTTCTCCGACCCCCAGGCCCTCAACAAGTGGGGCTTC CTCTACATCCAGTTCCGCGCCTCGGCCTACTACTTCATCGCCCCCGTCCTCGGCTACACGCTCATCAAGGCCATG TTCGTCGCCTTCGCCCAGCGCAGCAACGTGGCCCAGGCCGTCGGCTTCGTCATCATCGAGGCGGCCGCCCTCATC GCCGCCTCGGTCCTGCGGCCGTGGATGGACAAGAGCACCAACTCGTTCAACATCGCCATCTGCGTCATCAACTTC CTCAACGCCATCTTCCTCCTCATCTTCTCCAACGTCTTCGGCGCCCCCAGCCTCGTCGTCGGCGTCGTCGGCGTC GTCCTCTTTGTCCTCAACGCCGCCTTCTCGCTCATCCTGCTCATCATGGTCATCGTCTCGACCACCGTCACCTTC TTCCGCAAGAACCCCGACGCCCGCTACCAGGTCATGGCCGACGACCGCGCCTCCTTCATGAAGTCGCAGACGCAG CTGACGACGACGACGGAGCTCGACGCCCTCGCCGCCACGGCCCGCGGCGACAAGGCCGGCTACAAGACGCACCTC GACCTCGACGACGACAACGAGTCGCTCGCCTCGGAGGACCTGCGCCGCCGCGCCGACCCCAACGGCTCGCAGTCG TCGCAGGTCTCCTTCCACCCGGTGCCCGGCGGGCCCCGCTCGCCCGTCAACCCGTCGATGCCCCTCTTCCCGGCC GGCGCCAACCAGCGGCCCCAGAGCCCGTTCCGGTCGCCGTCGCCCAACAACTACAGCCGCTCCGGCTCGTCGCTC GCCCAGACGAGGTCGCACAACAACGCGAGCCCCGCCGCCTACCCCCCGGGATACCACCCGGCCAACGGCGCCAGG TAAGTTTGCCGTCCCTCACCCCTCTCGGCTCACCGAGGGGCACGCGCGGCTGACGGAGCTCCGACAGCCCTTGGC AGAGGGGAGCCGGGTACGATTAA |