© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1251 |
| Gene name | |
| Location | Contig_1272:1650..2936 |
| Strand | - |
| Gene length (bp) | 1286 |
| Transcript length (bp) | 1233 |
| Coding sequence length (bp) | 1233 |
| Protein length (aa) | 411 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00314 | Thaumatin | Thaumatin family | 6.0E-68 | 75 | 341 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50699|TLPH_ARATH | Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 | 71 | 344 | 5.0E-30 |
| sp|O80327|TLP1_PYRPY | Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 | 65 | 341 | 2.0E-29 |
| sp|Q9SMH2|TLP1_CASSA | Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 | 64 | 341 | 5.0E-29 |
| sp|Q9FSG7|TP1A_MALDO | Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 | 65 | 341 | 1.0E-27 |
| sp|P83332|TLP1_PRUPE | Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 | 65 | 341 | 1.0E-26 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50699|TLPH_ARATH | Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 | 71 | 344 | 5.0E-30 |
| sp|O80327|TLP1_PYRPY | Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 | 65 | 341 | 2.0E-29 |
| sp|Q9SMH2|TLP1_CASSA | Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 | 64 | 341 | 5.0E-29 |
| sp|Q9FSG7|TP1A_MALDO | Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 | 65 | 341 | 1.0E-27 |
| sp|P83332|TLP1_PRUPE | Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 | 65 | 341 | 1.0E-26 |
| sp|P32937|PR1A_HORVU | Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1 | 73 | 182 | 4.0E-24 |
| sp|P32938|PR1C_HORVU | Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1 | 73 | 182 | 5.0E-24 |
| sp|P28493|PR5_ARATH | Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 | 71 | 185 | 3.0E-23 |
| sp|P27357|TLP_WHEAT | Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1 | 73 | 182 | 4.0E-22 |
| sp|P33679|ZEAM_MAIZE | Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2 | 67 | 341 | 5.0E-22 |
| sp|P81295|PRR3_JUNAS | Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1 | 69 | 341 | 2.0E-21 |
| sp|P83336|TP1B_MALDO | Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 | 81 | 341 | 3.0E-21 |
| sp|P31110|TLP_ORYSJ | Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1 | 65 | 182 | 3.0E-20 |
| sp|P13867|IAAT_MAIZE | Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1 | 71 | 341 | 1.0E-19 |
| sp|P14170|OSMO_TOBAC | Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2 | 71 | 345 | 5.0E-19 |
| sp|Q53MB8|TLPH_ORYSJ | Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 | 69 | 184 | 5.0E-19 |
| sp|P50697|RST3_AVESA | Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1 | 73 | 182 | 2.0E-18 |
| sp|P50696|RST2_AVESA | Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1 | 73 | 182 | 2.0E-18 |
| sp|P50695|RST1_AVESA | Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1 | 73 | 182 | 8.0E-18 |
| sp|P50701|OS13_SOLCO | Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1 | 71 | 346 | 9.0E-18 |
| sp|Q01591|TPM1_SOLLC | Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1 | 73 | 346 | 1.0E-17 |
| sp|Q41350|OLP1_SOLLC | Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 | 71 | 184 | 1.0E-16 |
| sp|P50694|TLP_PRUAV | Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 | 65 | 184 | 2.0E-16 |
| sp|P25096|P21_SOYBN | Protein P21 OS=Glycine max PE=1 SV=1 | 73 | 182 | 7.0E-16 |
| sp|P50702|OS81_SOLCO | Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1 | 71 | 343 | 1.0E-15 |
| sp|P07052|PRR2_TOBAC | Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1 | 73 | 182 | 2.0E-15 |
| sp|P83335|TLP2_PRUPE | Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 | 65 | 184 | 2.0E-15 |
| sp|P50698|RST4_AVESA | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1 | 73 | 182 | 5.0E-15 |
| sp|P12670|NP24_SOLLC | Protein NP24 OS=Solanum lycopersicum PE=1 SV=2 | 71 | 343 | 1.0E-14 |
| sp|P13046|PRR1_TOBAC | Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1 | 73 | 182 | 1.0E-14 |
| sp|G5DC91|TLP1_MANZA | Thaumatin-like protein 1 OS=Manilkara zapota GN=TLP1 PE=1 SV=2 | 73 | 182 | 1.0E-13 |
| sp|P25871|OLPA_TOBAC | Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1 | 73 | 356 | 2.0E-13 |
| sp|P50700|OSL3_ARATH | Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2 | 73 | 182 | 5.0E-13 |
| sp|E3SU11|ALL13_OLEEU | Thaumatin-like protein OS=Olea europaea PE=1 SV=1 | 73 | 182 | 8.0E-13 |
| sp|P28493|PR5_ARATH | Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 | 275 | 341 | 3.0E-11 |
| sp|P02883|THM1_THADA | Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1 | 73 | 182 | 6.0E-11 |
| sp|P50703|OS35_SOLCO | Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1 | 73 | 184 | 1.0E-10 |
| sp|P02884|THM2_THADA | Thaumatin-2 OS=Thaumatococcus daniellii PE=1 SV=1 | 73 | 182 | 2.0E-10 |
| sp|Q53MB8|TLPH_ORYSJ | Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 | 275 | 325 | 1.0E-09 |
| sp|P50694|TLP_PRUAV | Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 | 275 | 341 | 4.0E-09 |
| sp|P81370|TLP_ACTDE | Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 | 73 | 182 | 9.0E-09 |
| sp|Q9LD79|PRR3_JUNVI | Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2 | 69 | 158 | 4.0E-08 |
| sp|P83335|TLP2_PRUPE | Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 | 275 | 341 | 3.0E-07 |
| sp|P81370|TLP_ACTDE | Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 | 248 | 341 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 34 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1251 MFSLLQSLRIRRFMIHFLFIASTLQLLLPVAEAGQFRVIKRDRQPDILRKPKHGAPAKRGPPQDGEEKIPLVITN KCDTPIWPGLATQAGTGPGTGGFELQPGTNQTLYVSGDWQGRVWGRTNCTVNGNSCACKTGDCFAKLDCDFSGAP PATLAEFNLAGGVDGMQTFYDISLVDGYNLPMGIRYLPAKNTTFIPPNLTNCACIATSGWLYAKAPTGTFYANAT FPVPLEANETNESLGGWCPWPNLAFPPTKPGDGVYPYPDDDVQRPAFSPCKSACATTGSDRDCCIGKYHDPNICK PSRYSTSVKAVCPDAYSFAFDDQKSTFIVPKGGGWEIVMCPVGRSTNILRQLGKELFELASGGRLSDLSMKRLRD VGYIEAGRGAASGARAPSWVLAAAPAALAAAWLWL* |
| Coding | >Hirsu2|1251 ATGTTCTCGTTGCTCCAGTCGCTACGAATCCGCCGCTTCATGATCCACTTTCTCTTCATCGCCTCGACACTCCAA CTGCTGCTGCCCGTTGCAGAGGCAGGCCAGTTTCGTGTCATCAAGCGCGATCGGCAGCCCGACATCCTGAGAAAG CCCAAGCACGGTGCACCGGCGAAGCGAGGACCGCCGCAAGACGGAGAAGAGAAGATCCCGCTCGTCATCACCAAC AAGTGCGACACGCCGATATGGCCTGGGCTCGCGACGCAGGCCGGCACCGGCCCGGGTACCGGTGGCTTTGAGTTG CAGCCGGGCACGAACCAGACTCTGTACGTGTCCGGGGACTGGCAGGGCCGAGTCTGGGGCCGGACCAACTGCACC GTCAACGGCAATTCCTGCGCCTGCAAGACGGGCGACTGCTTCGCGAAGCTGGACTGCGACTTCAGCGGGGCGCCG CCGGCGACGCTCGCCGAATTCAACCTGGCAGGCGGCGTCGATGGCATGCAGACCTTTTACGACATATCCCTCGTC GACGGCTACAACCTGCCCATGGGCATCAGGTATCTGCCGGCGAAGAACACGACGTTCATCCCGCCCAACCTGACG AATTGCGCCTGCATCGCGACGTCGGGCTGGCTGTACGCCAAGGCGCCGACGGGCACCTTTTATGCCAACGCCACC TTCCCCGTCCCTCTGGAGGCCAACGAGACGAACGAGAGCCTCGGCGGCTGGTGCCCGTGGCCGAACCTCGCGTTC CCGCCGACGAAGCCGGGGGACGGCGTCTACCCGTACCCGGACGACGACGTGCAGCGGCCTGCCTTTTCGCCGTGC AAGAGCGCATGCGCCACGACGGGGTCGGACCGGGACTGCTGCATCGGCAAATACCACGACCCCAACATCTGCAAG CCGTCGCGGTACAGCACGTCTGTCAAGGCGGTATGCCCGGACGCCTACAGCTTCGCCTTCGACGACCAGAAGTCG ACTTTTATCGTGCCCAAGGGCGGCGGCTGGGAGATTGTCATGTGCCCGGTCGGGCGCTCGACTAACATTCTGCGC CAGCTGGGCAAGGAGCTGTTTGAGCTCGCGAGCGGCGGCCGACTGTCGGACCTGTCTATGAAGCGGCTCCGCGAC GTCGGCTATATCGAGGCCGGCAGGGGGGCCGCGAGCGGGGCGCGGGCCCCGAGCTGGGTGCTGGCGGCGGCGCCG GCCGCTCTCGCCGCCGCCTGGCTCTGGCTGTGA |
| Transcript | >Hirsu2|1251 ATGTTCTCGTTGCTCCAGTCGCTACGAATCCGCCGCTTCATGATCCACTTTCTCTTCATCGCCTCGACACTCCAA CTGCTGCTGCCCGTTGCAGAGGCAGGCCAGTTTCGTGTCATCAAGCGCGATCGGCAGCCCGACATCCTGAGAAAG CCCAAGCACGGTGCACCGGCGAAGCGAGGACCGCCGCAAGACGGAGAAGAGAAGATCCCGCTCGTCATCACCAAC AAGTGCGACACGCCGATATGGCCTGGGCTCGCGACGCAGGCCGGCACCGGCCCGGGTACCGGTGGCTTTGAGTTG CAGCCGGGCACGAACCAGACTCTGTACGTGTCCGGGGACTGGCAGGGCCGAGTCTGGGGCCGGACCAACTGCACC GTCAACGGCAATTCCTGCGCCTGCAAGACGGGCGACTGCTTCGCGAAGCTGGACTGCGACTTCAGCGGGGCGCCG CCGGCGACGCTCGCCGAATTCAACCTGGCAGGCGGCGTCGATGGCATGCAGACCTTTTACGACATATCCCTCGTC GACGGCTACAACCTGCCCATGGGCATCAGGTATCTGCCGGCGAAGAACACGACGTTCATCCCGCCCAACCTGACG AATTGCGCCTGCATCGCGACGTCGGGCTGGCTGTACGCCAAGGCGCCGACGGGCACCTTTTATGCCAACGCCACC TTCCCCGTCCCTCTGGAGGCCAACGAGACGAACGAGAGCCTCGGCGGCTGGTGCCCGTGGCCGAACCTCGCGTTC CCGCCGACGAAGCCGGGGGACGGCGTCTACCCGTACCCGGACGACGACGTGCAGCGGCCTGCCTTTTCGCCGTGC AAGAGCGCATGCGCCACGACGGGGTCGGACCGGGACTGCTGCATCGGCAAATACCACGACCCCAACATCTGCAAG CCGTCGCGGTACAGCACGTCTGTCAAGGCGGTATGCCCGGACGCCTACAGCTTCGCCTTCGACGACCAGAAGTCG ACTTTTATCGTGCCCAAGGGCGGCGGCTGGGAGATTGTCATGTGCCCGGTCGGGCGCTCGACTAACATTCTGCGC CAGCTGGGCAAGGAGCTGTTTGAGCTCGCGAGCGGCGGCCGACTGTCGGACCTGTCTATGAAGCGGCTCCGCGAC GTCGGCTATATCGAGGCCGGCAGGGGGGCCGCGAGCGGGGCGCGGGCCCCGAGCTGGGTGCTGGCGGCGGCGCCG GCCGCTCTCGCCGCCGCCTGGCTCTGGCTGTGA |
| Gene | >Hirsu2|1251 ATGTTCTCGTTGCTCCAGTCGCTACGAATCCGCCGCTTCATGATCCACTTTCTCTTCATCGCCTCGACACTCCAA CTGCTGCTGCCCGTTGCAGAGGCAGGCCAGTTTCGTGTCATCAAGCGCGATCGGCAGCCCGACATCCTGAGAAAG CCCAAGCACGGTGCACCGGCGAAGCGAGGACCGCCGCAAGACGGAGAAGAGAAGATCCCGCTCGTCATCACCAAC AAGTGCGACACGCCGATATGGCCTGGGCTCGCGACGCAGGCCGGCACCGGCCCGGGTACCGGTGGCTTTGAGTTG CAGCCGGGCACGAACCAGACTCTGTACGTGTCCGGGGACTGGCAGGGCCGAGTCTGGGGCCGGACCAACTGCACC GTCAACGGCAATTCCTGCGCCTGCAAGACGGGCGACTGCTTCGCGAAGCTGGACTGCGACTTCAGCGTAGGTCCC CCGAGCATGCGTCGCGACGACGAGCTGACGCCCGACGGCTGCAGGGGGCGCCGCCGGCGACGCTCGCCGAATTCA ACCTGGCAGGCGGCGTCGATGGCATGCAGACCTTTTACGACATATCCCTCGTCGACGGCTACAACCTGCCCATGG GCATCAGGTATCTGCCGGCGAAGAACACGACGTTCATCCCGCCCAACCTGACGAATTGCGCCTGCATCGCGACGT CGGGCTGGCTGTACGCCAAGGCGCCGACGGGCACCTTTTATGCCAACGCCACCTTCCCCGTCCCTCTGGAGGCCA ACGAGACGAACGAGAGCCTCGGCGGCTGGTGCCCGTGGCCGAACCTCGCGTTCCCGCCGACGAAGCCGGGGGACG GCGTCTACCCGTACCCGGACGACGACGTGCAGCGGCCTGCCTTTTCGCCGTGCAAGAGCGCATGCGCCACGACGG GGTCGGACCGGGACTGCTGCATCGGCAAATACCACGACCCCAACATCTGCAAGCCGTCGCGGTACAGCACGTCTG TCAAGGCGGTATGCCCGGACGCCTACAGCTTCGCCTTCGACGACCAGAAGTCGACTTTTATCGTGCCCAAGGGCG GCGGCTGGGAGATTGTCATGTGCCCGGTCGGGCGCTCGACTAACATTCTGCGCCAGCTGGGCAAGGAGCTGTTTG AGCTCGCGAGCGGCGGCCGACTGTCGGACCTGTCTATGAAGCGGCTCCGCGACGTCGGCTATATCGAGGCCGGCA GGGGGGCCGCGAGCGGGGCGCGGGCCCCGAGCTGGGTGCTGGCGGCGGCGCCGGCCGCTCTCGCCGCCGCCTGGC TCTGGCTGTGA |