Protein ID | Hirsu2|125 |
Gene name | |
Location | Contig_102:6905..8528 |
Strand | - |
Gene length (bp) | 1623 |
Transcript length (bp) | 1443 |
Coding sequence length (bp) | 1443 |
Protein length (aa) | 481 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06985 | HET | Heterokaryon incompatibility protein (HET) | 4.0E-06 | 1 | 92 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UV10|HET6_NEUCR | Heterokaryon incompatibility protein 6, OR allele OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=het-6 PE=4 SV=1 | 1 | 473 | 4.0E-12 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Mitochondrion | Mitochondrial transit peptide | 0.6901 | 0.2715 | 0.2094 | 0.5237 | 0.7518 | 0.1955 | 0.2276 | 0.3172 | 0.2313 | 0.0599 |
Orthofinder run ID | 4 |
Orthogroup | 48 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|125 MNRTYSRAVRTLIWLGPDRDACSAAWQLVDKIYHVFQSQNPGARSVADIPFRLYSDPDHDTTGLPGWKHKLWQQL RNLFELPWFTRTWIIQEVALSRADPVILHGRRRYKWHRLGWAASWLRRNGYLRLDQVPNQIQNVETISNIRRSGS HSPWCLGALSVATSIKCHATDQRDKIYALLGLAAESSDAADVPDLLRANYELGVAQVYTKAAIFFLWTYKTLSIL TRAHGVSDDISRAQRKHKLDALPSWVPNWCDFAVTERHVAKSLSWLSHPTDARAATLQFPDHYNASCGLRAKLYE STDPSVLRLSGLQADVVVSTTSFDAAPQLSGGRAHDAQFLQLWRASLPVLRENTAVEDRIASWVRATTAEQFRLG GNTQAQTLKDGSAFLLDLLSRRGHQSDSPDIMVLLRKLSDGGRPESYVSLASNFCLHRNFIVTSKGRMGIGPSAT LPGDGVFVIFGGGVPYIIRKLQGGSVFVER* |
Coding | >Hirsu2|125 ATGAATCGGACCTACTCCCGAGCAGTCAGGACCCTAATATGGCTCGGGCCCGACCGCGATGCGTGCTCGGCGGCC TGGCAGCTGGTCGACAAGATATACCATGTCTTCCAGAGCCAGAACCCAGGCGCCCGGTCCGTGGCCGACATCCCC TTCAGGCTATATTCGGATCCCGACCACGATACCACAGGCCTTCCCGGATGGAAGCACAAGCTATGGCAGCAGCTG AGGAACCTGTTCGAGCTGCCGTGGTTCACAAGGACGTGGATCATCCAAGAAGTCGCGCTTTCGCGCGCAGACCCC GTCATTCTCCACGGCCGGCGCAGATACAAGTGGCATCGGCTGGGCTGGGCGGCGTCGTGGCTGCGCCGCAACGGA TATCTGCGCCTGGACCAGGTTCCGAACCAGATACAGAACGTCGAGACGATATCCAACATCCGCCGATCCGGATCG CACTCCCCCTGGTGCCTGGGCGCCTTGTCCGTCGCGACGTCCATCAAGTGCCACGCCACCGACCAGAGGGACAAG ATCTATGCTCTTCTCGGCCTGGCCGCCGAGAGCAGCGACGCGGCCGACGTGCCGGACCTGTTGCGGGCGAACTAC GAGCTGGGGGTCGCCCAGGTATACACCAAGGCTGCCATCTTCTTCCTCTGGACGTACAAGACGCTCTCCATCCTG ACGCGCGCGCACGGCGTGTCCGACGACATCTCCAGGGCGCAGCGCAAGCACAAGCTCGACGCGTTGCCTTCGTGG GTGCCCAACTGGTGCGACTTCGCCGTCACGGAGAGGCACGTCGCCAAGAGCCTTTCGTGGCTGTCTCACCCGACA GACGCCAGGGCGGCGACTCTGCAGTTTCCAGACCATTACAACGCCTCTTGCGGGCTGCGCGCGAAGCTCTATGAG TCTACGGATCCCTCGGTGCTCCGACTGAGTGGCCTGCAGGCTGACGTCGTCGTCAGCACGACCTCGTTCGACGCC GCGCCGCAGTTGTCGGGAGGACGGGCCCATGACGCCCAGTTCCTGCAGCTTTGGAGAGCTTCCCTGCCAGTCCTC CGGGAGAATACGGCTGTGGAGGACCGAATAGCTTCCTGGGTCAGGGCGACCACGGCTGAGCAGTTCCGCCTCGGC GGGAACACGCAAGCCCAGACTTTGAAGGACGGCTCGGCCTTCCTACTAGACCTCTTATCCAGGCGCGGGCACCAG AGTGACTCTCCGGACATCATGGTTCTCTTGAGGAAGCTCTCGGACGGCGGTAGACCAGAGTCCTACGTCTCGTTG GCAAGCAATTTCTGCCTTCATCGGAACTTCATAGTCACCTCCAAGGGGCGGATGGGCATTGGGCCGAGCGCCACG CTTCCAGGAGATGGTGTCTTTGTCATATTCGGCGGAGGCGTGCCCTATATAATCCGGAAGCTGCAGGGTGGCTCA GTCTTTGTAGAGCGGTAG |
Transcript | >Hirsu2|125 ATGAATCGGACCTACTCCCGAGCAGTCAGGACCCTAATATGGCTCGGGCCCGACCGCGATGCGTGCTCGGCGGCC TGGCAGCTGGTCGACAAGATATACCATGTCTTCCAGAGCCAGAACCCAGGCGCCCGGTCCGTGGCCGACATCCCC TTCAGGCTATATTCGGATCCCGACCACGATACCACAGGCCTTCCCGGATGGAAGCACAAGCTATGGCAGCAGCTG AGGAACCTGTTCGAGCTGCCGTGGTTCACAAGGACGTGGATCATCCAAGAAGTCGCGCTTTCGCGCGCAGACCCC GTCATTCTCCACGGCCGGCGCAGATACAAGTGGCATCGGCTGGGCTGGGCGGCGTCGTGGCTGCGCCGCAACGGA TATCTGCGCCTGGACCAGGTTCCGAACCAGATACAGAACGTCGAGACGATATCCAACATCCGCCGATCCGGATCG CACTCCCCCTGGTGCCTGGGCGCCTTGTCCGTCGCGACGTCCATCAAGTGCCACGCCACCGACCAGAGGGACAAG ATCTATGCTCTTCTCGGCCTGGCCGCCGAGAGCAGCGACGCGGCCGACGTGCCGGACCTGTTGCGGGCGAACTAC GAGCTGGGGGTCGCCCAGGTATACACCAAGGCTGCCATCTTCTTCCTCTGGACGTACAAGACGCTCTCCATCCTG ACGCGCGCGCACGGCGTGTCCGACGACATCTCCAGGGCGCAGCGCAAGCACAAGCTCGACGCGTTGCCTTCGTGG GTGCCCAACTGGTGCGACTTCGCCGTCACGGAGAGGCACGTCGCCAAGAGCCTTTCGTGGCTGTCTCACCCGACA GACGCCAGGGCGGCGACTCTGCAGTTTCCAGACCATTACAACGCCTCTTGCGGGCTGCGCGCGAAGCTCTATGAG TCTACGGATCCCTCGGTGCTCCGACTGAGTGGCCTGCAGGCTGACGTCGTCGTCAGCACGACCTCGTTCGACGCC GCGCCGCAGTTGTCGGGAGGACGGGCCCATGACGCCCAGTTCCTGCAGCTTTGGAGAGCTTCCCTGCCAGTCCTC CGGGAGAATACGGCTGTGGAGGACCGAATAGCTTCCTGGGTCAGGGCGACCACGGCTGAGCAGTTCCGCCTCGGC GGGAACACGCAAGCCCAGACTTTGAAGGACGGCTCGGCCTTCCTACTAGACCTCTTATCCAGGCGCGGGCACCAG AGTGACTCTCCGGACATCATGGTTCTCTTGAGGAAGCTCTCGGACGGCGGTAGACCAGAGTCCTACGTCTCGTTG GCAAGCAATTTCTGCCTTCATCGGAACTTCATAGTCACCTCCAAGGGGCGGATGGGCATTGGGCCGAGCGCCACG CTTCCAGGAGATGGTGTCTTTGTCATATTCGGCGGAGGCGTGCCCTATATAATCCGGAAGCTGCAGGGTGGCTCA GTCTTTGTAGAGCGGTAG |
Gene | >Hirsu2|125 ATGAATCGGACCTACTCCCGAGCAGTCAGGACCCTAATATGGCTCGGGCCCGACCGCGATGCGTGCTCGGCGGCC TGGCAGCTGGTCGACAAGATATACCATGTCTTCCAGAGCCAGAACCCAGGCGCCCGGTCCGTGGCCGACATCCCC TTCAGGCTATATTCGGATCCCGACCACGATACCACAGGCCTTCCCGGATGGAAGCACAAGCTATGGCAGCAGCTG AGGAACCTGTTCGAGCTGCCGTGGTTCACAAGGACGTGGATCATCCAAGAAGTCGCGCTTTCGCGCGCAGACCCC GTCATTCTCCACGGCCGGCGCAGATACAAGTGGCATCGGCTGGGCTGGGCGGCGTCGTGGCTGCGCCGCAACGGA TATCTGCGCCTGGACCAGGTTCCGAACCAGATACAGAACGTCGAGACGATATCCAACATCCGCCGATCCGGATCG CACTCCCCCTGGTGCCTGGGCGCCTTGTCCGTCGCGACGTCCATCAAGTGCCACGCCACCGACCAGAGGGACAAG ATCTATGCTCTTCTCGGCCTGGCCGCCGAGAGCAGCGACGCGGCCGACGTGCCGGACCTGTTGCGGGCGAACTAC GAGCTGGGGGTCGCCCAGGTATACACCAAGGCTGCCATCTTCTTCCTCTGGACGTACAAGACGCTCTCCATCCTG ACGCGCGCGCACGGCGTGTCCGACGACATCTCCAGGGCGCAGCGCAAGCACAAGCTCGACGCGTTGCCTTCGTGG GTGCCCAACTGGTGCGACTTCGCCGTCACGGAGAGGCACGTCGCCAAGAGCCTTTCGTGGCTGTCTCACCCGACA GACGCCAGGGCGGCGACTCTGCAGTTTCCAGACCATTACAACGCCTCTTGCGGGCTGCGCGCGAAGCTCTATGAG TCTACGGATCCCTCGGTGCTCCGACTGAGTGGCCTGCAGGCTGACGTCGTCGTCAGCACGACCTCGTTCGACGCC GCGCCGCAGTTGTCGGGAGGACGGGCCCATGACGCCCAGTTCCTGCAGCTTTGGAGAGCTTCCCTGCCAGTCCTC CGGGAGAATACGGCTGTGGAGGACCGAATAGCTTCCTGGGTCAGGGCGACCACGGCTGAGCAGTTCCGCCTCGGC GGGAACACGCAAGCCCAGACTTTGAAGGACGGCTCGGCCTTCCTACTAGACCTCTTATCCAGGCGCGGGCACCAG AGTGACTCTCCGGACATCATGGTTCTCTTGAGGAAGCTCTCGGACGGCGGTAGACCAGAGTCCTACGTCTCGTTG GCAAGCAATTTCTGCCTTCATCGGAACTTCATAGTCACCTCCAAGGGGCGGATGGGCATTGGGCCGAGCGCCACG CTTCCAGGAGATGGTGTCTTTGTCATATTCGGCGGAGGCGTGCCCTATATAATCCGGAAGCTGCAGGGTGGCTCA GTCTTTGTAGGTGAGTCGTATGTCGAAGGACTAATGAGTGGCGAGGCGGTTCGACAGTGGCAAGGGGGTGGCTTG CCGGAAGAGATGCTTGAGATACGATGATCCGTCTTTCTTCGCTCGGTGTTGCCCGCGCTTGCGAGCGGTACAGTC CAATATGATTCTGTGGCGCGGGCTGTGCCCGTCCTTTTAGAGCGGTAG |