Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1237
Gene name
LocationContig_1269:6622..7485
Strand-
Gene length (bp)863
Transcript length (bp)786
Coding sequence length (bp)786
Protein length (aa) 262

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09273 Rubis-subs-bind Rubisco LSMT substrate-binding 5.3E-20 73 194
PF01753 zf-MYND MYND finger 5.9E-09 216 254

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2 24 201 1.0E-12
sp|B0VX69|SETD3_CALJA Histone-lysine N-methyltransferase setd3 OS=Callithrix jacchus GN=SETD3 PE=3 SV=2 24 201 1.0E-12
sp|E2RBS6|SETD3_CANLF Histone-lysine N-methyltransferase setd3 OS=Canis lupus familiaris GN=SETD3 PE=3 SV=1 24 201 2.0E-12
sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1 24 201 2.0E-12
sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1 24 201 3.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2 24 201 1.0E-12
sp|B0VX69|SETD3_CALJA Histone-lysine N-methyltransferase setd3 OS=Callithrix jacchus GN=SETD3 PE=3 SV=2 24 201 1.0E-12
sp|E2RBS6|SETD3_CANLF Histone-lysine N-methyltransferase setd3 OS=Canis lupus familiaris GN=SETD3 PE=3 SV=1 24 201 2.0E-12
sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1 24 201 2.0E-12
sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1 24 201 3.0E-12
sp|Q91WC0|SETD3_MOUSE Histone-lysine N-methyltransferase setd3 OS=Mus musculus GN=Setd3 PE=1 SV=1 24 201 3.0E-12
sp|A9X1D0|SETD3_PAPAN Histone-lysine N-methyltransferase setd3 OS=Papio anubis GN=SETD3 PE=3 SV=1 24 201 4.0E-12
sp|B5FW36|SETD3_OTOGA Histone-lysine N-methyltransferase setd3 OS=Otolemur garnettii GN=SETD3 PE=3 SV=1 24 201 7.0E-12
sp|Q86TU7|SETD3_HUMAN Histone-lysine N-methyltransferase setd3 OS=Homo sapiens GN=SETD3 PE=1 SV=1 24 201 1.0E-11
sp|Q5ZML9|SETD3_CHICK Histone-lysine N-methyltransferase setd3 OS=Gallus gallus GN=SETD3 PE=2 SV=1 24 215 4.0E-11
sp|Q7SXS7|SETD3_DANRE Histone-lysine N-methyltransferase setd3 OS=Danio rerio GN=setd3 PE=1 SV=1 24 173 6.0E-10
sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1 24 203 1.0E-08
sp|Q5FWU8|ZMY10_XENLA Zinc finger MYND domain-containing protein 10 OS=Xenopus laevis GN=zmynd10 PE=2 SV=1 196 254 6.0E-08
sp|Q6NQJ8|SDG40_ARATH Protein SET DOMAIN GROUP 40 OS=Arabidopsis thaliana GN=SDG40 PE=2 SV=1 23 155 6.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1237
MLNHSLDAKQCHAYDPKSGDLSILAAKDYQVGDQVFISYGSVPNNRLLRLYGFVLPDNPNDSYDLVLQTSPVAPL
YEQKERLWALAGLSSTCTISLTVKDPLPNSVLRYLRIQRLDESNITDMTLQLANGTDGKVSDENEMQVLHFLVDS
IGILLESFVIPLEKLEARLTGQDYPAGGNAWAAAQVSAGEQRILTWAKKSAENLLEAISRPPATKCANCGNRSNA
LMSCGRCKAVKYCKRQCQVAHFKDHRSACRTHAGLK*
Coding >Hirsu2|1237
ATGCTAAATCATTCTCTCGACGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCT
GCGAAGGACTACCAAGTCGGAGATCAGGTATTCATCTCCTACGGTAGCGTGCCGAACAACCGACTTCTGCGTCTA
TACGGCTTTGTTCTGCCGGACAACCCCAACGACAGTTACGACCTCGTACTCCAGACGAGCCCGGTGGCCCCCCTC
TACGAGCAGAAGGAAAGGCTCTGGGCGCTGGCAGGGCTCAGCTCAACATGCACTATTTCTCTCACTGTGAAGGAT
CCGCTTCCGAACAGCGTGCTTCGATACCTCCGAATCCAGCGACTGGACGAATCCAACATCACAGACATGACTCTG
CAGCTAGCGAATGGCACAGACGGCAAGGTCAGCGATGAAAACGAGATGCAGGTGTTGCACTTTTTGGTAGATTCG
ATAGGCATCCTCCTGGAGAGCTTCGTTATCCCGCTGGAAAAGCTCGAGGCGAGGCTCACCGGGCAAGACTACCCC
GCTGGTGGCAACGCTTGGGCAGCGGCACAGGTCAGTGCCGGCGAGCAGCGAATCTTGACGTGGGCCAAGAAGTCG
GCCGAAAATCTGCTGGAGGCGATTTCTCGTCCACCAGCGACAAAGTGCGCCAACTGCGGGAACAGGTCTAATGCG
TTGATGTCGTGCGGTAGATGCAAGGCCGTCAAGTACTGCAAGAGACAGTGTCAGGTAGCGCACTTTAAAGACCAC
AGGTCCGCGTGCCGGACTCATGCGGGATTGAAATGA
Transcript >Hirsu2|1237
ATGCTAAATCATTCTCTCGACGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCT
GCGAAGGACTACCAAGTCGGAGATCAGGTATTCATCTCCTACGGTAGCGTGCCGAACAACCGACTTCTGCGTCTA
TACGGCTTTGTTCTGCCGGACAACCCCAACGACAGTTACGACCTCGTACTCCAGACGAGCCCGGTGGCCCCCCTC
TACGAGCAGAAGGAAAGGCTCTGGGCGCTGGCAGGGCTCAGCTCAACATGCACTATTTCTCTCACTGTGAAGGAT
CCGCTTCCGAACAGCGTGCTTCGATACCTCCGAATCCAGCGACTGGACGAATCCAACATCACAGACATGACTCTG
CAGCTAGCGAATGGCACAGACGGCAAGGTCAGCGATGAAAACGAGATGCAGGTGTTGCACTTTTTGGTAGATTCG
ATAGGCATCCTCCTGGAGAGCTTCGTTATCCCGCTGGAAAAGCTCGAGGCGAGGCTCACCGGGCAAGACTACCCC
GCTGGTGGCAACGCTTGGGCAGCGGCACAGGTCAGTGCCGGCGAGCAGCGAATCTTGACGTGGGCCAAGAAGTCG
GCCGAAAATCTGCTGGAGGCGATTTCTCGTCCACCAGCGACAAAGTGCGCCAACTGCGGGAACAGGTCTAATGCG
TTGATGTCGTGCGGTAGATGCAAGGCCGTCAAGTACTGCAAGAGACAGTGTCAGGTAGCGCACTTTAAAGACCAC
AGGTCCGCGTGCCGGACTCATGCGGGATTGAAATGA
Gene >Hirsu2|1237
ATGCTAAATCATTCTCTCGACGCAAAGCAGTGCCATGCTTACGATCCAAAGTCTGGAGACCTCTCCATCCTTGCT
GCGAAGGACTACCAAGTCGGAGATCAGGTTTGCCCATCACTCTGCGAATCTCTGTCGATGCGCTTTTTTTTTTTC
AGAAAGCTAACCCGATGTTAAAATGATAGGTATTCATCTCCTACGGTAGCGTGCCGAACAACCGACTTCTGCGTC
TATACGGCTTTGTTCTGCCGGACAACCCCAACGACAGTTACGACCTCGTACTCCAGACGAGCCCGGTGGCCCCCC
TCTACGAGCAGAAGGAAAGGCTCTGGGCGCTGGCAGGGCTCAGCTCAACATGCACTATTTCTCTCACTGTGAAGG
ATCCGCTTCCGAACAGCGTGCTTCGATACCTCCGAATCCAGCGACTGGACGAATCCAACATCACAGACATGACTC
TGCAGCTAGCGAATGGCACAGACGGCAAGGTCAGCGATGAAAACGAGATGCAGGTGTTGCACTTTTTGGTAGATT
CGATAGGCATCCTCCTGGAGAGCTTCGTTATCCCGCTGGAAAAGCTCGAGGCGAGGCTCACCGGGCAAGACTACC
CCGCTGGTGGCAACGCTTGGGCAGCGGCACAGGTCAGTGCCGGCGAGCAGCGAATCTTGACGTGGGCCAAGAAGT
CGGCCGAAAATCTGCTGGAGGCGATTTCTCGTCCACCAGCGACAAAGTGCGCCAACTGCGGGAACAGGTCTAATG
CGTTGATGTCGTGCGGTAGATGCAAGGCCGTCAAGTACTGCAAGAGACAGTGTCAGGTAGCGCACTTTAAAGACC
ACAGGTCCGCGTGCCGGACTCATGCGGGATTGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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