© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1221 |
| Gene name | |
| Location | Contig_1262:6735..7691 |
| Strand | + |
| Gene length (bp) | 956 |
| Transcript length (bp) | 843 |
| Coding sequence length (bp) | 843 |
| Protein length (aa) | 281 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01467 | CTP_transf_like | Cytidylyltransferase-like | 1.8E-30 | 152 | 280 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P13259|PCY1_YEAST | Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2 | 66 | 280 | 3.0E-68 |
| sp|O74975|PCY1_SCHPO | Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.02c PE=1 SV=3 | 137 | 280 | 6.0E-67 |
| sp|Q9QZC4|PCY1B_RAT | Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=1 SV=1 | 144 | 280 | 1.0E-57 |
| sp|Q811Q9|PCY1B_MOUSE | Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2 | 144 | 280 | 1.0E-57 |
| sp|Q9Y5K3|PCY1B_HUMAN | Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1 | 118 | 280 | 2.0E-57 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P13259|PCY1_YEAST | Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2 | 66 | 280 | 3.0E-68 |
| sp|O74975|PCY1_SCHPO | Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.02c PE=1 SV=3 | 137 | 280 | 6.0E-67 |
| sp|Q9QZC4|PCY1B_RAT | Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=1 SV=1 | 144 | 280 | 1.0E-57 |
| sp|Q811Q9|PCY1B_MOUSE | Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2 | 144 | 280 | 1.0E-57 |
| sp|Q9Y5K3|PCY1B_HUMAN | Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1 | 118 | 280 | 2.0E-57 |
| sp|Q9ZV56|CCT1_ARATH | Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CCT1 PE=1 SV=1 | 141 | 280 | 7.0E-57 |
| sp|F4JJE0|CCT2_ARATH | Choline-phosphate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CCT2 PE=1 SV=1 | 147 | 280 | 2.0E-56 |
| sp|P49585|PCY1A_HUMAN | Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2 | 144 | 280 | 1.0E-54 |
| sp|P19836|PCY1A_RAT | Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus GN=Pcyt1a PE=1 SV=2 | 144 | 280 | 2.0E-54 |
| sp|P49586|PCY1A_MOUSE | Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a PE=1 SV=1 | 144 | 280 | 4.0E-54 |
| sp|P49584|PCY1A_CRIGR | Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus GN=PCYT1A PE=2 SV=1 | 144 | 280 | 4.0E-53 |
| sp|P49587|PCY1_PLAFK | Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CTP PE=2 SV=1 | 146 | 280 | 3.0E-52 |
| sp|P49583|PCY1_CAEEL | Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis elegans GN=F08C6.2 PE=3 SV=2 | 146 | 280 | 2.0E-47 |
| sp|Q55BZ4|PCY2_DICDI | Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium discoideum GN=pctA PE=1 SV=1 | 139 | 280 | 4.0E-31 |
| sp|Q9ZVI9|PECT1_ARATH | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana GN=PECT1 PE=1 SV=1 | 147 | 280 | 6.0E-25 |
| sp|Q5EA75|PCY2_BOVIN | Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2 PE=2 SV=1 | 135 | 280 | 4.0E-24 |
| sp|Q99447|PCY2_HUMAN | Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens GN=PCYT2 PE=1 SV=1 | 135 | 280 | 6.0E-24 |
| sp|Q922E4|PCY2_MOUSE | Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus GN=Pcyt2 PE=1 SV=1 | 147 | 280 | 1.0E-23 |
| sp|O88637|PCY2_RAT | Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus GN=Pcyt2 PE=1 SV=1 | 147 | 280 | 2.0E-23 |
| sp|P33412|ECT1_YEAST | Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1 SV=1 | 148 | 280 | 1.0E-22 |
| sp|Q9UTI6|ECT1_SCHPO | Probable ethanolamine-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC15E1.05c PE=2 SV=1 | 150 | 280 | 3.0E-22 |
| sp|Q8SQW6|ECT1_ENCCU | Probable ethanolamine-phosphate cytidylyltransferase OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1 SV=1 | 150 | 280 | 2.0E-18 |
| sp|Q55BZ4|PCY2_DICDI | Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium discoideum GN=pctA PE=1 SV=1 | 151 | 280 | 9.0E-17 |
| sp|Q922E4|PCY2_MOUSE | Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus GN=Pcyt2 PE=1 SV=1 | 138 | 280 | 9.0E-13 |
| sp|O88637|PCY2_RAT | Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus GN=Pcyt2 PE=1 SV=1 | 151 | 280 | 4.0E-12 |
| sp|Q99447|PCY2_HUMAN | Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens GN=PCYT2 PE=1 SV=1 | 138 | 280 | 6.0E-12 |
| sp|Q5EA75|PCY2_BOVIN | Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2 PE=2 SV=1 | 138 | 280 | 2.0E-11 |
| sp|Q9ZVI9|PECT1_ARATH | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana GN=PECT1 PE=1 SV=1 | 151 | 280 | 2.0E-10 |
| sp|Q8SQW6|ECT1_ENCCU | Probable ethanolamine-phosphate cytidylyltransferase OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1 SV=1 | 143 | 239 | 6.0E-09 |
| sp|P33412|ECT1_YEAST | Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1 SV=1 | 151 | 220 | 7.0E-08 |
| sp|C5A1S7|RIBL_THEGJ | FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=ribL PE=3 SV=1 | 140 | 217 | 8.0E-08 |
| sp|C6A439|RIBL_THESM | FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=ribL PE=3 SV=1 | 147 | 239 | 1.0E-07 |
| sp|Q9UZ37|RIBL_PYRAB | FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3 SV=1 | 147 | 239 | 2.0E-07 |
| sp|O58466|RIBL_PYRHO | FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1 | 147 | 239 | 4.0E-06 |
| sp|B6YXC8|RIBL_THEON | FAD synthase OS=Thermococcus onnurineus (strain NA1) GN=ribL PE=3 SV=1 | 147 | 239 | 6.0E-06 |
| sp|P27623|TAGD_BACSU | Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis (strain 168) GN=tagD PE=1 SV=1 | 150 | 277 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009058 | biosynthetic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1221 MPSPSSSSQGGKRKRAAAGLVSPPDPVDGAQQASSRDASGEEGDTTAPESGRHHRRNSNGAAPNPKRQRASADRN ADAADHALDPGEPSDTTEASVDIAERVGRKGRKLTLKDCDDLDKTDAMPPPPIGKLTHPAGGFTTNSPPVGRPVR VYADGVFDLFHLGHMRQLEQAKKAFPNTTLVVGVTGDDETHRRKGLTVLSASERAETVRHCKWVDEVIEDCPWIV TPEFLDANRLDYVAHDDLPYGAAEGDDIYQPIKATGKFLVTQRTEGVSTTGIITR* |
| Coding | >Hirsu2|1221 ATGCCCTCGCCGTCCAGCTCGTCCCAGGGCGGCAAGCGCAAGAGGGCGGCCGCCGGCCTCGTCTCGCCCCCGGAC CCGGTCGACGGCGCGCAGCAGGCGTCGTCCCGCGATGCGTCGGGCGAAGAGGGCGACACCACGGCGCCCGAGTCC GGCCGCCATCACCGGCGGAACTCGAACGGCGCGGCGCCGAATCCTAAGCGACAGCGGGCCAGCGCGGATCGAAAT GCCGACGCCGCCGACCACGCCCTCGACCCGGGCGAGCCGAGCGACACGACCGAGGCCAGCGTCGACATCGCCGAA CGCGTCGGCCGCAAGGGGCGCAAGCTCACCCTCAAGGACTGCGACGATCTTGACAAGACGGATGCCATGCCGCCG CCACCCATCGGCAAGCTGACCCACCCGGCCGGCGGCTTCACGACGAACTCGCCCCCCGTCGGCCGTCCGGTGAGG GTCTATGCCGATGGTGTTTTCGACCTGTTCCATCTCGGACATATGCGCCAGCTCGAGCAGGCCAAAAAGGCCTTC CCCAACACGACGCTCGTCGTCGGCGTCACGGGCGACGACGAGACGCACCGGCGCAAGGGCCTGACCGTCCTGTCC GCCAGCGAGCGTGCCGAGACGGTCCGACACTGCAAGTGGGTGGACGAAGTCATCGAGGACTGCCCGTGGATTGTC ACGCCCGAATTCCTCGACGCCAATCGGCTCGATTACGTGGCCCACGACGACCTCCCGTACGGCGCCGCCGAGGGC GACGACATTTACCAGCCCATCAAGGCGACCGGCAAGTTCCTCGTCACGCAGCGGACAGAAGGCGTCAGCACGACC GGCATCATCACAAGGTGA |
| Transcript | >Hirsu2|1221 ATGCCCTCGCCGTCCAGCTCGTCCCAGGGCGGCAAGCGCAAGAGGGCGGCCGCCGGCCTCGTCTCGCCCCCGGAC CCGGTCGACGGCGCGCAGCAGGCGTCGTCCCGCGATGCGTCGGGCGAAGAGGGCGACACCACGGCGCCCGAGTCC GGCCGCCATCACCGGCGGAACTCGAACGGCGCGGCGCCGAATCCTAAGCGACAGCGGGCCAGCGCGGATCGAAAT GCCGACGCCGCCGACCACGCCCTCGACCCGGGCGAGCCGAGCGACACGACCGAGGCCAGCGTCGACATCGCCGAA CGCGTCGGCCGCAAGGGGCGCAAGCTCACCCTCAAGGACTGCGACGATCTTGACAAGACGGATGCCATGCCGCCG CCACCCATCGGCAAGCTGACCCACCCGGCCGGCGGCTTCACGACGAACTCGCCCCCCGTCGGCCGTCCGGTGAGG GTCTATGCCGATGGTGTTTTCGACCTGTTCCATCTCGGACATATGCGCCAGCTCGAGCAGGCCAAAAAGGCCTTC CCCAACACGACGCTCGTCGTCGGCGTCACGGGCGACGACGAGACGCACCGGCGCAAGGGCCTGACCGTCCTGTCC GCCAGCGAGCGTGCCGAGACGGTCCGACACTGCAAGTGGGTGGACGAAGTCATCGAGGACTGCCCGTGGATTGTC ACGCCCGAATTCCTCGACGCCAATCGGCTCGATTACGTGGCCCACGACGACCTCCCGTACGGCGCCGCCGAGGGC GACGACATTTACCAGCCCATCAAGGCGACCGGCAAGTTCCTCGTCACGCAGCGGACAGAAGGCGTCAGCACGACC GGCATCATCACAAGGTGA |
| Gene | >Hirsu2|1221 ATGCCCTCGCCGTCCAGCTCGTCCCAGGGCGGCAAGCGCAAGAGGGCGGCCGCCGGCCTCGTCTCGCCCCCGGAC CCGGTCGACGGCGCGCAGCAGGCGTCGTCCCGCGATGCGTCGGGCGAAGAGGGCGACACCACGGCGCCCGAGTCC GGCCGCCATCACCGGCGGAACTCGAACGGCGCGGCGCCGAATCCTAAGCGACAGCGGGCCAGCGCGGATCGAAAT GCCGACGCCGCCGACCACGCCCTCGACCCGGGCGAGCCGAGCGACACGACCGAGGCCAGCGTCGACATCGCCGAA CGCGTCGGCCGCAAGGGGCGCAAGCTCACCCTCAAGGACTGCGACGATCTTGACAAGACGGATGCCATGCCGCCG CCACCCATCGGCAAGCTGACCCACCCGGCCGGCGGCTTCACGACGAACTCGCCCCCCGTCGGCCGTCCGGTGAGG GTCTATGCCGATGGTGTTTTCGACCTGTTCCATCTCGGGTCAGTCCTCCCTGTCTCTCTTCTTTTTTTTCCCTAC CTTTTTTCCAGCACGCACGCATGGGCCCGCGTTGCCGGATCTGTAGAGGACAACGGGACGGCTGACGCGCCGGCA GACATATGCGCCAGCTCGAGCAGGCCAAAAAGGCCTTCCCCAACACGACGCTCGTCGTCGGCGTCACGGGCGACG ACGAGACGCACCGGCGCAAGGGCCTGACCGTCCTGTCCGCCAGCGAGCGTGCCGAGACGGTCCGACACTGCAAGT GGGTGGACGAAGTCATCGAGGACTGCCCGTGGATTGTCACGCCCGAATTCCTCGACGCCAATCGGCTCGATTACG TGGCCCACGACGACCTCCCGTACGGCGCCGCCGAGGGCGACGACATTTACCAGCCCATCAAGGCGACCGGCAAGT TCCTCGTCACGCAGCGGACAGAAGGCGTCAGCACGACCGGCATCATCACAAGGTGA |