Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|122
Gene name
LocationContig_102:120..543
Strand+
Gene length (bp)423
Transcript length (bp)423
Coding sequence length (bp)423
Protein length (aa) 141

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6589 0.5642 0.0859 0.0686 0.0985 0.0235 0.105 0.1013 0.1273 0.0026

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup696
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|420
Ophiocordyceps australis map64 (Brazil) OphauB2|1763
Ophiocordyceps camponoti-floridani Ophcf2|04586
Ophiocordyceps camponoti-rufipedis Ophun1|3757
Ophiocordyceps kimflemingae Ophio5|2073
Ophiocordyceps subramaniannii Hirsu2|122 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9454

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|122
MANWLLDHATSPAELRAMWANVAACLRPGGRFLGIRATRAALTSDRFHTGHYGVLIEHVHEPSEHGARYRVSLVS
DPRVSFEATPQPDLYDMVDEVPRALGFTGFASVPLAGLPVLDEDPAFWKEMLEEPVFAIVTATKA*
Coding >Hirsu2|122
ATGGCCAACTGGCTCCTCGACCACGCCACCTCGCCGGCCGAGCTGCGCGCCATGTGGGCCAACGTCGCCGCCTGC
CTCCGGCCCGGCGGCCGCTTCCTCGGCATCCGCGCCACGCGCGCCGCCCTGACCTCCGACCGCTTCCACACGGGG
CACTACGGCGTCCTGATCGAGCATGTGCACGAGCCGTCCGAGCACGGCGCCCGCTACCGCGTCTCCCTCGTCAGC
GACCCGCGCGTTTCCTTCGAGGCCACGCCCCAGCCCGACTTGTACGACATGGTCGACGAGGTCCCGCGCGCGCTC
GGTTTCACCGGCTTCGCCTCCGTGCCCCTCGCCGGCTTGCCCGTCCTGGACGAGGACCCGGCCTTCTGGAAGGAG
ATGCTGGAGGAGCCGGTGTTCGCCATCGTGACGGCCACCAAGGCTTGA
Transcript >Hirsu2|122
ATGGCCAACTGGCTCCTCGACCACGCCACCTCGCCGGCCGAGCTGCGCGCCATGTGGGCCAACGTCGCCGCCTGC
CTCCGGCCCGGCGGCCGCTTCCTCGGCATCCGCGCCACGCGCGCCGCCCTGACCTCCGACCGCTTCCACACGGGG
CACTACGGCGTCCTGATCGAGCATGTGCACGAGCCGTCCGAGCACGGCGCCCGCTACCGCGTCTCCCTCGTCAGC
GACCCGCGCGTTTCCTTCGAGGCCACGCCCCAGCCCGACTTGTACGACATGGTCGACGAGGTCCCGCGCGCGCTC
GGTTTCACCGGCTTCGCCTCCGTGCCCCTCGCCGGCTTGCCCGTCCTGGACGAGGACCCGGCCTTCTGGAAGGAG
ATGCTGGAGGAGCCGGTGTTCGCCATCGTGACGGCCACCAAGGCTTGA
Gene >Hirsu2|122
ATGGCCAACTGGCTCCTCGACCACGCCACCTCGCCGGCCGAGCTGCGCGCCATGTGGGCCAACGTCGCCGCCTGC
CTCCGGCCCGGCGGCCGCTTCCTCGGCATCCGCGCCACGCGCGCCGCCCTGACCTCCGACCGCTTCCACACGGGG
CACTACGGCGTCCTGATCGAGCATGTGCACGAGCCGTCCGAGCACGGCGCCCGCTACCGCGTCTCCCTCGTCAGC
GACCCGCGCGTTTCCTTCGAGGCCACGCCCCAGCCCGACTTGTACGACATGGTCGACGAGGTCCCGCGCGCGCTC
GGTTTCACCGGCTTCGCCTCCGTGCCCCTCGCCGGCTTGCCCGTCCTGGACGAGGACCCGGCCTTCTGGAAGGAG
ATGCTGGAGGAGCCGGTGTTCGCCATCGTGACGGCCACCAAGGCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail