Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1217
Gene name
LocationContig_1261:634..1603
Strand-
Gene length (bp)969
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1217
MVAFFVGWELWEDMTFVLACSIVLVFLVGVVKLWWINRKLRKHEVIEEERRARLAEMRHCGIQSLRVNEIPFGVR
ALESGVEVEGIWISRSNTPDDGLTPASSTHDFDEPAAGKGKQRMVVPGADHGPAAPANTRDTLAPSPRIVATRAP
APGESSSSGASGSADVSSPSAVPHRTSQIPVRSRAIRASHATHRDGPLPQAETQPRLVVTGPLEGANEASRDTAL
YGAAEVYANRQTRRANTGFEVLPAGVLGPRHELMTHTGAGAADEWLVDDGGLYGGATLEATQGQPSRLRKKNRS*
Coding >Hirsu2|1217
ATGGTCGCCTTCTTCGTCGGCTGGGAGCTGTGGGAGGACATGACGTTTGTCCTGGCCTGCAGCATCGTCCTCGTC
TTCCTCGTTGGCGTCGTCAAGCTGTGGTGGATCAACCGGAAGCTGCGCAAGCACGAGGTCATCGAGGAGGAGAGG
CGCGCCCGGCTCGCCGAGATGCGCCACTGCGGCATCCAGTCCTTGCGCGTAAACGAGATACCCTTTGGCGTCCGC
GCCCTCGAGAGCGGCGTTGAGGTTGAAGGCATCTGGATATCGCGGTCTAACACACCCGATGACGGCCTCACCCCT
GCCTCGTCCACCCACGACTTCGACGAGCCCGCGGCCGGCAAGGGCAAGCAGAGGATGGTCGTGCCAGGCGCCGAC
CACGGCCCCGCCGCTCCGGCAAACACTCGCGATACCCTTGCACCGTCTCCGAGAATAGTCGCGACCAGGGCGCCG
GCCCCTGGCGAGTCATCATCAAGCGGTGCCAGCGGCTCGGCGGATGTGAGCTCGCCGTCGGCGGTGCCTCATCGA
ACATCGCAGATACCCGTGAGGTCGCGGGCCATCCGAGCATCGCACGCGACCCATAGAGACGGCCCGCTTCCGCAG
GCCGAGACGCAGCCGCGGCTCGTAGTGACAGGGCCCCTCGAAGGCGCCAACGAGGCGTCACGCGACACCGCCCTC
TATGGCGCAGCCGAGGTGTACGCGAACAGGCAGACGCGGAGAGCCAACACGGGCTTCGAGGTCCTTCCGGCCGGC
GTGCTGGGCCCGAGACACGAGCTCATGACCCACACCGGCGCCGGCGCGGCGGACGAGTGGCTCGTTGACGACGGC
GGCCTCTACGGCGGCGCGACGCTAGAAGCGACACAGGGTCAGCCGTCGCGGTTGCGCAAGAAGAACCGCAGTTGA
Transcript >Hirsu2|1217
ATGGTCGCCTTCTTCGTCGGCTGGGAGCTGTGGGAGGACATGACGTTTGTCCTGGCCTGCAGCATCGTCCTCGTC
TTCCTCGTTGGCGTCGTCAAGCTGTGGTGGATCAACCGGAAGCTGCGCAAGCACGAGGTCATCGAGGAGGAGAGG
CGCGCCCGGCTCGCCGAGATGCGCCACTGCGGCATCCAGTCCTTGCGCGTAAACGAGATACCCTTTGGCGTCCGC
GCCCTCGAGAGCGGCGTTGAGGTTGAAGGCATCTGGATATCGCGGTCTAACACACCCGATGACGGCCTCACCCCT
GCCTCGTCCACCCACGACTTCGACGAGCCCGCGGCCGGCAAGGGCAAGCAGAGGATGGTCGTGCCAGGCGCCGAC
CACGGCCCCGCCGCTCCGGCAAACACTCGCGATACCCTTGCACCGTCTCCGAGAATAGTCGCGACCAGGGCGCCG
GCCCCTGGCGAGTCATCATCAAGCGGTGCCAGCGGCTCGGCGGATGTGAGCTCGCCGTCGGCGGTGCCTCATCGA
ACATCGCAGATACCCGTGAGGTCGCGGGCCATCCGAGCATCGCACGCGACCCATAGAGACGGCCCGCTTCCGCAG
GCCGAGACGCAGCCGCGGCTCGTAGTGACAGGGCCCCTCGAAGGCGCCAACGAGGCGTCACGCGACACCGCCCTC
TATGGCGCAGCCGAGGTGTACGCGAACAGGCAGACGCGGAGAGCCAACACGGGCTTCGAGGTCCTTCCGGCCGGC
GTGCTGGGCCCGAGACACGAGCTCATGACCCACACCGGCGCCGGCGCGGCGGACGAGTGGCTCGTTGACGACGGC
GGCCTCTACGGCGGCGCGACGCTAGAAGCGACACAGGGTCAGCCGTCGCGGTTGCGCAAGAAGAACCGCAGTTGA
Gene >Hirsu2|1217
ATGGTCGCCTTCTTCGTCGGCTGGGAGCTGTGGGAGGACATGACGTTTGTGAGCGCGCTCCGGCCGGCCTTGTTC
CCCGCCAGCCAGCTGGCATGCTGACTCCGGGCTCCTCGACAGGTCCTGGCCTGCAGCATCGTCCTCGTCTTCCTC
GTTGGCGTCGTCAAGCTGTGGTGGATCAACCGGAAGCTGCGCAAGCACGAGGTCATCGAGGAGGAGAGGCGCGCC
CGGCTCGCCGAGATGCGCCACTGCGGCATCCAGTCCTTGCGCGTAAACGAGATACCCTTTGGCGTCCGCGCCCTC
GAGAGCGGCGTTGAGGTTGAAGGCATCTGGATATCGCGGTCTAACACACCCGATGACGGCCTCACCCCTGCCTCG
TCCACCCACGACTTCGACGAGCCCGCGGCCGGCAAGGGCAAGCAGAGGATGGTCGTGCCAGGCGCCGACCACGGC
CCCGCCGCTCCGGCAAACACTCGCGATACCCTTGCACCGTCTCCGAGAATAGTCGCGACCAGGGCGCCGGCCCCT
GGCGAGTCATCATCAAGCGGTGCCAGCGGCTCGGCGGATGTGAGCTCGCCGTCGGCGGTGCCTCATCGAACATCG
CAGATACCCGTGAGGTCGCGGGCCATCCGAGCATCGCACGCGACCCATAGAGACGGCCCGCTTCCGCAGGCCGAG
ACGCAGCCGCGGCTCGTAGTGACAGGGCCCCTCGAAGGCGCCAACGAGGCGTCACGCGACACCGCCCTCTATGGC
GCAGCCGAGGTGTACGCGAACAGGCAGACGCGGAGAGCCAACACGGGCTTCGAGGTCCTTCCGGCCGGCGTGCTG
GGCCCGAGACACGAGCTCATGACCCACACCGGCGCCGGCGCGGCGGACGAGTGGCTCGTTGACGACGGCGGCCTC
TACGGCGGCGCGACGCTAGAAGCGACACAGGGTCAGCCGTCGCGGTTGCGCAAGAAGAACCGCAGTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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