© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|120 |
| Gene name | |
| Location | Contig_1019:3573..4020 |
| Strand | + |
| Gene length (bp) | 447 |
| Transcript length (bp) | 447 |
| Coding sequence length (bp) | 447 |
| Protein length (aa) | 149 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14832 | Tautomerase_3 | Putative oxalocrotonate tautomerase enzyme | 2.2E-49 | 1 | 144 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.8865 | 0.0704 | 0.5896 | 0.1789 | 0.2363 | 0.0786 | 0.0814 | 0.0823 | 0.1214 | 0.0777 |
| Orthofinder run ID | 4 |
| Orthogroup | 8744 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|120 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|120 MPLWIIYHPPGTFADDEARGALATDITALYTAIGLPRFYVVVEFVQLHYGDTWVGAEKRDGRQRPHIRLVIDHIA VQAPAADDDESRRESAARIERVLEPHVARRGYDWEFHVNEADRRLWRINGFVPPEHPSEVEDLWARENRPVPY* |
| Coding | >Hirsu2|120 ATGCCACTGTGGATCATCTACCACCCTCCCGGGACCTTCGCCGACGACGAGGCCAGGGGCGCGCTGGCGACGGAC ATCACGGCCCTCTACACCGCCATCGGCCTGCCCAGGTTCTACGTCGTCGTCGAGTTCGTCCAGCTGCACTACGGC GACACCTGGGTCGGGGCCGAGAAGCGGGACGGGAGGCAGCGGCCGCACATCCGGCTGGTCATCGACCACATCGCC GTGCAGGCGCCGGCCGCCGACGACGACGAGAGCCGGCGCGAGTCGGCGGCGCGCATCGAGAGGGTGCTCGAGCCG CACGTCGCCCGCCGCGGCTACGACTGGGAGTTCCACGTCAACGAGGCCGACCGCCGGCTCTGGCGCATCAACGGC TTCGTCCCGCCCGAGCACCCGAGCGAGGTCGAGGACCTGTGGGCGAGAGAGAACCGGCCGGTGCCTTATTGA |
| Transcript | >Hirsu2|120 ATGCCACTGTGGATCATCTACCACCCTCCCGGGACCTTCGCCGACGACGAGGCCAGGGGCGCGCTGGCGACGGAC ATCACGGCCCTCTACACCGCCATCGGCCTGCCCAGGTTCTACGTCGTCGTCGAGTTCGTCCAGCTGCACTACGGC GACACCTGGGTCGGGGCCGAGAAGCGGGACGGGAGGCAGCGGCCGCACATCCGGCTGGTCATCGACCACATCGCC GTGCAGGCGCCGGCCGCCGACGACGACGAGAGCCGGCGCGAGTCGGCGGCGCGCATCGAGAGGGTGCTCGAGCCG CACGTCGCCCGCCGCGGCTACGACTGGGAGTTCCACGTCAACGAGGCCGACCGCCGGCTCTGGCGCATCAACGGC TTCGTCCCGCCCGAGCACCCGAGCGAGGTCGAGGACCTGTGGGCGAGAGAGAACCGGCCGGTGCCTTATTGA |
| Gene | >Hirsu2|120 ATGCCACTGTGGATCATCTACCACCCTCCCGGGACCTTCGCCGACGACGAGGCCAGGGGCGCGCTGGCGACGGAC ATCACGGCCCTCTACACCGCCATCGGCCTGCCCAGGTTCTACGTCGTCGTCGAGTTCGTCCAGCTGCACTACGGC GACACCTGGGTCGGGGCCGAGAAGCGGGACGGGAGGCAGCGGCCGCACATCCGGCTGGTCATCGACCACATCGCC GTGCAGGCGCCGGCCGCCGACGACGACGAGAGCCGGCGCGAGTCGGCGGCGCGCATCGAGAGGGTGCTCGAGCCG CACGTCGCCCGCCGCGGCTACGACTGGGAGTTCCACGTCAACGAGGCCGACCGCCGGCTCTGGCGCATCAACGGC TTCGTCCCGCCCGAGCACCCGAGCGAGGTCGAGGACCTGTGGGCGAGAGAGAACCGGCCGGTGCCTTATTGA |