© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1199 |
| Gene name | |
| Location | Contig_1257:305..1976 |
| Strand | - |
| Gene length (bp) | 1671 |
| Transcript length (bp) | 1545 |
| Coding sequence length (bp) | 1545 |
| Protein length (aa) | 515 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09949 | APP1_cat | Phosphatidate phosphatase APP1, catalytic domain | 7.6E-37 | 277 | 422 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008195 | phosphatidate phosphatase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016791 | phosphatase activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular|Cell membrane | 0.078 | 0.0383 | 0.7008 | 0.5317 | 0.1262 | 0.0176 | 0.2809 | 0.4392 | 0.2922 | 0.0043 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 27 | 0.9994 |
| Orthofinder run ID | 4 |
| Orthogroup | 6030 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1199 MLRQVVSVAALAAFAWSAPTSMPTATATGSQIGGVAPAPAPEQTPAPKIGERDLKDNAKSFIDSLASNVGSEFSS FLDSGILDFPKGFPTGSQVEQSAGVSKTDIDAKPTQVLNLPAYGNWTDRGWNVRIHGNVYKVPDISQKKIDDLAN VFLIGTSVEKLSPSEQEQARNVTRSIFIVQQGDKNVTMRFESNVAVSSNASGGASNAGGGGQTVNLPYNTTAEGD FDTFITLSNTTGPGGGHMVPGNETARIQTLNVYAEGTSSGNATAYLVPPEGVTVVSDIDDILRVTKIYEPKEGLL NTFARPFAPWMKMPDIYANWSSSVNNLHFHYLTTTPEQVTRNYMDFIYKTYPLGSFDTRPLNFSDLSATLHIRRF LLDKVFQTFPRRKFVLVADTTNRDVMKAYPQMYKDYPGQVQCILLRNTSSTDPGDKFPYDTSGFKDIPKERYMFF NVPDDLARLDVVNGQCLNGSIAQNVTFRTQGLPFGIGDGGSAAGRAWPSVLPAMLAALVAAMVV* |
| Coding | >Hirsu2|1199 ATGCTGCGACAAGTGGTCTCAGTCGCGGCGCTGGCCGCCTTCGCGTGGAGCGCGCCGACGTCGATGCCCACGGCG ACAGCAACCGGCAGCCAAATAGGGGGCGTCGCGCCGGCACCGGCGCCGGAGCAAACGCCAGCCCCGAAGATCGGC GAACGAGACTTGAAAGACAACGCCAAGAGTTTTATAGACAGCCTCGCGAGCAACGTCGGAAGCGAATTCTCTTCC TTTCTCGACTCCGGCATCCTCGACTTCCCCAAAGGCTTCCCGACCGGGTCGCAGGTCGAGCAGTCGGCAGGCGTG TCGAAGACGGACATTGACGCCAAGCCGACGCAAGTGCTGAACCTACCGGCCTACGGCAACTGGACAGACAGGGGC TGGAACGTCCGGATCCACGGAAATGTGTACAAGGTCCCCGATATCTCGCAGAAGAAGATTGACGACCTCGCCAAT GTTTTTCTCATTGGCACGAGTGTCGAGAAGCTGTCGCCTTCGGAGCAGGAGCAGGCCCGTAACGTGACAAGGTCC ATCTTCATCGTCCAGCAAGGCGACAAGAACGTGACCATGAGATTCGAGAGCAACGTGGCCGTCAGCTCGAACGCG AGCGGCGGCGCTTCCAATGCGGGCGGCGGTGGGCAGACGGTGAACTTGCCGTACAACACGACTGCCGAAGGCGAC TTCGACACCTTCATCACCCTGAGCAACACCACGGGGCCGGGCGGCGGACACATGGTGCCGGGGAACGAGACGGCG CGGATCCAGACCCTCAACGTGTACGCAGAAGGGACGAGCAGTGGAAACGCAACGGCATACCTGGTGCCGCCCGAG GGCGTGACAGTCGTGTCCGACATCGACGACATCCTCCGCGTGACCAAGATCTACGAGCCAAAGGAGGGCCTGCTC AACACGTTCGCGCGGCCGTTTGCGCCATGGATGAAAATGCCCGACATCTACGCGAACTGGTCGTCGTCGGTCAAC AACCTGCACTTCCACTATCTGACGACGACGCCGGAGCAGGTGACGCGAAACTACATGGACTTCATCTACAAGACC TACCCCCTCGGCTCCTTCGACACTCGGCCCCTCAACTTCTCCGACCTGTCCGCCACGCTGCACATCCGCAGGTTC CTGCTCGACAAGGTGTTCCAGACCTTTCCACGCAGGAAGTTCGTCCTGGTGGCCGACACGACGAACCGCGACGTC ATGAAGGCCTACCCGCAGATGTACAAGGACTACCCGGGGCAGGTCCAGTGCATCCTGCTGCGCAACACGAGCTCG ACCGACCCGGGCGACAAGTTTCCGTACGACACGTCGGGCTTCAAGGACATACCCAAGGAACGATACATGTTCTTC AACGTCCCCGACGACCTGGCCAGGCTCGACGTCGTCAACGGGCAGTGTCTGAACGGCTCGATTGCGCAGAACGTG ACCTTTAGGACTCAGGGGCTGCCGTTTGGGATCGGCGACGGCGGCAGCGCGGCCGGCAGGGCGTGGCCGTCGGTG CTTCCCGCAATGTTGGCGGCCCTGGTGGCGGCCATGGTCGTCTAA |
| Transcript | >Hirsu2|1199 ATGCTGCGACAAGTGGTCTCAGTCGCGGCGCTGGCCGCCTTCGCGTGGAGCGCGCCGACGTCGATGCCCACGGCG ACAGCAACCGGCAGCCAAATAGGGGGCGTCGCGCCGGCACCGGCGCCGGAGCAAACGCCAGCCCCGAAGATCGGC GAACGAGACTTGAAAGACAACGCCAAGAGTTTTATAGACAGCCTCGCGAGCAACGTCGGAAGCGAATTCTCTTCC TTTCTCGACTCCGGCATCCTCGACTTCCCCAAAGGCTTCCCGACCGGGTCGCAGGTCGAGCAGTCGGCAGGCGTG TCGAAGACGGACATTGACGCCAAGCCGACGCAAGTGCTGAACCTACCGGCCTACGGCAACTGGACAGACAGGGGC TGGAACGTCCGGATCCACGGAAATGTGTACAAGGTCCCCGATATCTCGCAGAAGAAGATTGACGACCTCGCCAAT GTTTTTCTCATTGGCACGAGTGTCGAGAAGCTGTCGCCTTCGGAGCAGGAGCAGGCCCGTAACGTGACAAGGTCC ATCTTCATCGTCCAGCAAGGCGACAAGAACGTGACCATGAGATTCGAGAGCAACGTGGCCGTCAGCTCGAACGCG AGCGGCGGCGCTTCCAATGCGGGCGGCGGTGGGCAGACGGTGAACTTGCCGTACAACACGACTGCCGAAGGCGAC TTCGACACCTTCATCACCCTGAGCAACACCACGGGGCCGGGCGGCGGACACATGGTGCCGGGGAACGAGACGGCG CGGATCCAGACCCTCAACGTGTACGCAGAAGGGACGAGCAGTGGAAACGCAACGGCATACCTGGTGCCGCCCGAG GGCGTGACAGTCGTGTCCGACATCGACGACATCCTCCGCGTGACCAAGATCTACGAGCCAAAGGAGGGCCTGCTC AACACGTTCGCGCGGCCGTTTGCGCCATGGATGAAAATGCCCGACATCTACGCGAACTGGTCGTCGTCGGTCAAC AACCTGCACTTCCACTATCTGACGACGACGCCGGAGCAGGTGACGCGAAACTACATGGACTTCATCTACAAGACC TACCCCCTCGGCTCCTTCGACACTCGGCCCCTCAACTTCTCCGACCTGTCCGCCACGCTGCACATCCGCAGGTTC CTGCTCGACAAGGTGTTCCAGACCTTTCCACGCAGGAAGTTCGTCCTGGTGGCCGACACGACGAACCGCGACGTC ATGAAGGCCTACCCGCAGATGTACAAGGACTACCCGGGGCAGGTCCAGTGCATCCTGCTGCGCAACACGAGCTCG ACCGACCCGGGCGACAAGTTTCCGTACGACACGTCGGGCTTCAAGGACATACCCAAGGAACGATACATGTTCTTC AACGTCCCCGACGACCTGGCCAGGCTCGACGTCGTCAACGGGCAGTGTCTGAACGGCTCGATTGCGCAGAACGTG ACCTTTAGGACTCAGGGGCTGCCGTTTGGGATCGGCGACGGCGGCAGCGCGGCCGGCAGGGCGTGGCCGTCGGTG CTTCCCGCAATGTTGGCGGCCCTGGTGGCGGCCATGGTCGTCTAA |
| Gene | >Hirsu2|1199 ATGCTGCGACAAGTGGTCTCAGTCGCGGCGCTGGCCGCCTTCGCGTGGAGCGCGCCGACGTCGATGCCCACGGCG ACAGCAACCGGCAGCCAAATAGGGGGCGTCGCGCCGGCACCGGCGCCGGAGCAAACGCCAGCCCCGAAGATCGGC GAACGAGACTTGAAAGACAACGCCAAGAGTTTTATAGACAGCCTCGCGAGCAACGTCGGAAGCGAATTCTCTTCC TTTCTCGACTCCGGCATCCTCGACTTCCCCAAAGGCTTCCCGACCGGGTCGCAGGTCGAGCAGTCGGCAGGCGTG TCGAAGACGGACATTGACGCCAAGCCGACGCAAGTGCTGAACCTACCGTGAGTCGCTCCGCAGCTTCAGTGTGTA CCAGGAGGCACGCGTTGACAGCGGGTGCGCTCGTCAGGGCCTACGGCAACTGGACAGACAGGGGCTGGAACGTCC GGATCCACGGAAATGTGTACAAGGTCCCCGATATCTCGCAGAAGAAGATTGACGACCTCGCCAATGTTTTTCTCA TTGGCACGAGTGTCGAGAAGCTGTCGCCTTCGGAGCAGGAGCAGGCCCGTAACGTGACAAGGTCCATCTTCATCG TCCAGCAAGGCGACAAGAACGTGACCATGAGATTCGAGAGCAACGTGGCCGTCAGCTCGAACGCGAGCGGCGGCG CTTCCAATGCGGTAGGTCTCTTTGAACTGGCGATTCTTGTCCGGCGATCTTCGCTCACTCGTTACGGGACAGGGC GGCGGTGGGCAGACGGTGAACTTGCCGTACAACACGACTGCCGAAGGCGACTTCGACACCTTCATCACCCTGAGC AACACCACGGGGCCGGGCGGCGGACACATGGTGCCGGGGAACGAGACGGCGCGGATCCAGACCCTCAACGTGTAC GCAGAAGGGACGAGCAGTGGAAACGCAACGGCATACCTGGTGCCGCCCGAGGGCGTGACAGTCGTGTCCGACATC GACGACATCCTCCGCGTGACCAAGATCTACGAGCCAAAGGAGGGCCTGCTCAACACGTTCGCGCGGCCGTTTGCG CCATGGATGAAAATGCCCGACATCTACGCGAACTGGTCGTCGTCGGTCAACAACCTGCACTTCCACTATCTGACG ACGACGCCGGAGCAGGTGACGCGAAACTACATGGACTTCATCTACAAGACCTACCCCCTCGGCTCCTTCGACACT CGGCCCCTCAACTTCTCCGACCTGTCCGCCACGCTGCACATCCGCAGGTTCCTGCTCGACAAGGTGTTCCAGACC TTTCCACGCAGGAAGTTCGTCCTGGTGGCCGACACGACGAACCGCGACGTCATGAAGGCCTACCCGCAGATGTAC AAGGACTACCCGGGGCAGGTCCAGTGCATCCTGCTGCGCAACACGAGCTCGACCGACCCGGGCGACAAGTTTCCG TACGACACGTCGGGCTTCAAGGACATACCCAAGGAACGATACATGTTCTTCAACGTCCCCGACGACCTGGCCAGG CTCGACGTCGTCAACGGGCAGTGTCTGAACGGCTCGATTGCGCAGAACGTGACCTTTAGGACTCAGGGGCTGCCG TTTGGGATCGGCGACGGCGGCAGCGCGGCCGGCAGGGCGTGGCCGTCGGTGCTTCCCGCAATGTTGGCGGCCCTG GTGGCGGCCATGGTCGTCTAA |