© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|119 |
| Gene name | |
| Location | Contig_1019:1758..2836 |
| Strand | - |
| Gene length (bp) | 1078 |
| Transcript length (bp) | 1017 |
| Coding sequence length (bp) | 1017 |
| Protein length (aa) | 339 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 2.1E-17 | 6 | 254 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.8E-09 | 10 | 129 |
| PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 8.0E-10 | 8 | 137 |
| PF16363 | GDP_Man_Dehyd | GDP-mannose 4,6 dehydratase | 2.8E-06 | 7 | 84 |
| PF05368 | NmrA | NmrA-like family | 6.6E-06 | 6 | 122 |
| PF02719 | Polysacc_synt_2 | Polysaccharide biosynthesis protein | 5.1E-05 | 6 | 131 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UT59|YKJ7_SCHPO | Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC513.07 PE=3 SV=1 | 6 | 318 | 2.0E-24 |
| sp|P83775|GRP2_CANAL | Putative NADPH-dependent methylglyoxal reductase GRP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRP2 PE=1 SV=2 | 6 | 289 | 3.0E-24 |
| sp|P53183|YGD9_YEAST | Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL039W PE=1 SV=1 | 2 | 332 | 3.0E-22 |
| sp|P53111|ARI1_YEAST | NADPH-dependent aldehyde reductase ARI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARI1 PE=1 SV=1 | 6 | 332 | 1.0E-20 |
| sp|Q9UUN9|ALD2_SPOSA | Aldehyde reductase 2 OS=Sporidiobolus salmonicolor PE=1 SV=3 | 6 | 284 | 5.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UT59|YKJ7_SCHPO | Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC513.07 PE=3 SV=1 | 6 | 318 | 2.0E-24 |
| sp|P83775|GRP2_CANAL | Putative NADPH-dependent methylglyoxal reductase GRP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRP2 PE=1 SV=2 | 6 | 289 | 3.0E-24 |
| sp|P53183|YGD9_YEAST | Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL039W PE=1 SV=1 | 2 | 332 | 3.0E-22 |
| sp|P53111|ARI1_YEAST | NADPH-dependent aldehyde reductase ARI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARI1 PE=1 SV=1 | 6 | 332 | 1.0E-20 |
| sp|Q9UUN9|ALD2_SPOSA | Aldehyde reductase 2 OS=Sporidiobolus salmonicolor PE=1 SV=3 | 6 | 284 | 5.0E-20 |
| sp|Q12068|GRE2_YEAST | NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRE2 PE=1 SV=1 | 6 | 333 | 9.0E-20 |
| sp|O94563|YGD4_SCHPO | Putative uncharacterized oxidoreductase C1773.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.04 PE=1 SV=1 | 6 | 329 | 1.0E-17 |
| sp|Q03049|YD541_YEAST | Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR541C PE=3 SV=2 | 6 | 333 | 3.0E-17 |
| sp|Q9SEV0|BAN_ARATH | Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2 | 8 | 328 | 9.0E-16 |
| sp|P51102|DFRA_ARATH | Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=1 SV=2 | 2 | 209 | 3.0E-14 |
| sp|Q9XES5|DFRA_MALDO | Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | 2 | 203 | 3.0E-13 |
| sp|Q84KP0|DFRA_PYRCO | Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | 2 | 203 | 4.0E-13 |
| sp|Q9CA28|TKPR2_ARATH | Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=1 SV=1 | 7 | 288 | 4.0E-12 |
| sp|P14721|DFRA_ANTMA | Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1 | 6 | 203 | 8.0E-12 |
| sp|P51104|DFRA_DIACA | Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | 6 | 203 | 2.0E-11 |
| sp|P51110|DFRA_VITVI | Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | 6 | 203 | 9.0E-11 |
| sp|P51106|DFRA_HORVU | Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1 | 6 | 203 | 2.0E-10 |
| sp|O22133|BEN1_ARATH | Protein BRI1-5 ENHANCED 1 OS=Arabidopsis thaliana GN=BEN1 PE=2 SV=1 | 6 | 318 | 2.0E-10 |
| sp|P51105|DFRA_GERHY | Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1 | 6 | 203 | 5.0E-10 |
| sp|P14720|DFRA_PETHY | Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2 | 4 | 203 | 8.0E-10 |
| sp|P51107|DFRA_SOLLC | Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1 | 6 | 203 | 1.0E-09 |
| sp|P51103|DFRA_CALCH | Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1 | 4 | 125 | 1.0E-09 |
| sp|Q9S9N9|CCR1_ARATH | Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | 6 | 256 | 3.0E-09 |
| sp|Q40316|VESTR_MEDSA | Vestitone reductase OS=Medicago sativa PE=1 SV=1 | 3 | 203 | 9.0E-09 |
| sp|Q9SAH9|CCR2_ARATH | Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | 6 | 129 | 2.0E-08 |
| sp|P51108|DFRA_MAIZE | Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1 | 2 | 313 | 3.0E-08 |
| sp|P73212|DFRA_SYNY3 | Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1 | 6 | 248 | 5.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
| GO:0006694 | steroid biosynthetic process | Yes |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016229 | steroid dehydrogenase activity | No |
| GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7089 | 0.3866 | 0.2805 | 0.1014 | 0.4055 | 0.0241 | 0.0769 | 0.1785 | 0.1692 | 0.0666 |
| Orthofinder run ID | 4 |
| Orthogroup | 4789 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|119 MERPRIFVTGGTGFIGSQVVALALESGYRIRLSVRRRGQIDDLKARFSEFPDWLDFAVIADLGDSAAVEAALDDA EYILHLASPMPGKGSDFRTGYVDPAVNITTAVLQAAVAAPRVKRVVVVSSVLALMPMGGLMMPGLEVHENANRSI AIDINMAFPDGPAGHGMKYQGSKILAHRATLDWVAQHRPKFDLVTLHPTLVIGTDATQSDARPGGMNAYLMQSLA SEKPTMPSSVVDVRDVAQALLRALTAPVNVGAGLTEAIIGGPPFDWEDLVAFVRARYPTLPLKLTGPFQPGLYPD ASRAERDWGIKWRGMEEAVGSVLDQQMELKRKVAHNAS* |
| Coding | >Hirsu2|119 ATGGAGCGTCCTCGCATCTTTGTTACCGGAGGTACGGGCTTCATCGGGTCGCAGGTCGTTGCTCTGGCCTTGGAG TCGGGCTACCGTATTCGACTGAGCGTGCGGAGACGAGGTCAGATCGATGACCTCAAAGCTCGCTTCTCCGAGTTC CCAGACTGGCTCGACTTTGCCGTGATCGCTGACCTCGGTGACAGCGCTGCCGTCGAAGCGGCGCTCGATGACGCC GAGTACATATTACATCTCGCCTCGCCGATGCCCGGTAAGGGCTCCGATTTCCGCACGGGCTATGTCGATCCGGCT GTTAATATCACGACGGCCGTCCTGCAGGCTGCCGTAGCGGCCCCACGTGTTAAGAGAGTCGTTGTTGTGTCTTCG GTGCTCGCCCTGATGCCTATGGGCGGGCTGATGATGCCGGGATTGGAAGTGCATGAGAACGCAAACCGTTCCATC GCCATCGATATAAACATGGCCTTCCCAGACGGACCAGCCGGCCACGGCATGAAATATCAAGGATCGAAGATTCTG GCCCATCGAGCGACACTGGACTGGGTGGCACAACACAGGCCAAAGTTCGACCTTGTCACGCTCCATCCGACCCTG GTGATAGGCACAGACGCCACGCAGTCGGACGCGAGGCCCGGCGGTATGAATGCGTACTTGATGCAATCGCTGGCG TCCGAGAAGCCGACGATGCCGAGTTCGGTCGTCGACGTCCGCGACGTGGCCCAGGCCCTTCTCCGTGCCCTCACC GCGCCCGTCAATGTCGGGGCGGGCCTGACGGAGGCTATCATCGGCGGACCGCCGTTCGACTGGGAGGACTTGGTG GCGTTCGTCCGAGCGAGGTATCCGACCTTGCCGTTGAAGCTGACCGGCCCGTTCCAGCCGGGACTGTACCCAGAC GCCAGCCGGGCTGAGCGTGACTGGGGGATCAAGTGGCGTGGGATGGAGGAAGCCGTTGGGAGCGTCTTGGATCAG CAGATGGAGCTCAAGAGGAAAGTTGCGCATAATGCTTCATAG |
| Transcript | >Hirsu2|119 ATGGAGCGTCCTCGCATCTTTGTTACCGGAGGTACGGGCTTCATCGGGTCGCAGGTCGTTGCTCTGGCCTTGGAG TCGGGCTACCGTATTCGACTGAGCGTGCGGAGACGAGGTCAGATCGATGACCTCAAAGCTCGCTTCTCCGAGTTC CCAGACTGGCTCGACTTTGCCGTGATCGCTGACCTCGGTGACAGCGCTGCCGTCGAAGCGGCGCTCGATGACGCC GAGTACATATTACATCTCGCCTCGCCGATGCCCGGTAAGGGCTCCGATTTCCGCACGGGCTATGTCGATCCGGCT GTTAATATCACGACGGCCGTCCTGCAGGCTGCCGTAGCGGCCCCACGTGTTAAGAGAGTCGTTGTTGTGTCTTCG GTGCTCGCCCTGATGCCTATGGGCGGGCTGATGATGCCGGGATTGGAAGTGCATGAGAACGCAAACCGTTCCATC GCCATCGATATAAACATGGCCTTCCCAGACGGACCAGCCGGCCACGGCATGAAATATCAAGGATCGAAGATTCTG GCCCATCGAGCGACACTGGACTGGGTGGCACAACACAGGCCAAAGTTCGACCTTGTCACGCTCCATCCGACCCTG GTGATAGGCACAGACGCCACGCAGTCGGACGCGAGGCCCGGCGGTATGAATGCGTACTTGATGCAATCGCTGGCG TCCGAGAAGCCGACGATGCCGAGTTCGGTCGTCGACGTCCGCGACGTGGCCCAGGCCCTTCTCCGTGCCCTCACC GCGCCCGTCAATGTCGGGGCGGGCCTGACGGAGGCTATCATCGGCGGACCGCCGTTCGACTGGGAGGACTTGGTG GCGTTCGTCCGAGCGAGGTATCCGACCTTGCCGTTGAAGCTGACCGGCCCGTTCCAGCCGGGACTGTACCCAGAC GCCAGCCGGGCTGAGCGTGACTGGGGGATCAAGTGGCGTGGGATGGAGGAAGCCGTTGGGAGCGTCTTGGATCAG CAGATGGAGCTCAAGAGGAAAGTTGCGCATAATGCTTCATAG |
| Gene | >Hirsu2|119 ATGGAGCGTCCTCGCATCTTTGTTACCGGAGGTACGGGCTTCATCGGGTCGCAGGTCGTTGCTCTGGCCTTGGAG TCGGGCTACCGTATTCGACTGAGCGTGCGGAGACGAGGTCAGATCGATGACCTCAAAGCTCGCTTCTCCGAGTTC CCAGACTGGCTCGACTTTGCCGTGATCGCTGACCTCGGTGACAGCGCTGCCGTCGAAGCGGCGCTCGATGACGCC GAGTACATATTACATCTCGCCTCGCCGATGCCCGGTAAGGGCTCCGATTTCCGCACGGGCTATGTCGATCCGGCT GTTAATATCACGACGGCCGTCCTGCAGGCTGCCGTAGCGGCCCCACGTGTTAAGAGAGTCGTTGTTGTGTCTTCG GTGCTCGCCCTGATGCCTATGGGCGGGCTGATGATGCCGGGATTGGAAGTGCATGGTGCGTCCAAACTTCTATGT TACCAAGAGAACTTGGCACATGTTGACGCTCCTGTGAGTAGAGAACGCAAACCGTTCCATCGCCATCGATATAAA CATGGCCTTCCCAGACGGACCAGCCGGCCACGGCATGAAATATCAAGGATCGAAGATTCTGGCCCATCGAGCGAC ACTGGACTGGGTGGCACAACACAGGCCAAAGTTCGACCTTGTCACGCTCCATCCGACCCTGGTGATAGGCACAGA CGCCACGCAGTCGGACGCGAGGCCCGGCGGTATGAATGCGTACTTGATGCAATCGCTGGCGTCCGAGAAGCCGAC GATGCCGAGTTCGGTCGTCGACGTCCGCGACGTGGCCCAGGCCCTTCTCCGTGCCCTCACCGCGCCCGTCAATGT CGGGGCGGGCCTGACGGAGGCTATCATCGGCGGACCGCCGTTCGACTGGGAGGACTTGGTGGCGTTCGTCCGAGC GAGGTATCCGACCTTGCCGTTGAAGCTGACCGGCCCGTTCCAGCCGGGACTGTACCCAGACGCCAGCCGGGCTGA GCGTGACTGGGGGATCAAGTGGCGTGGGATGGAGGAAGCCGTTGGGAGCGTCTTGGATCAGCAGATGGAGCTCAA GAGGAAAGTTGCGCATAATGCTTCATAG |