Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|1182
Gene name
Location	Contig_125:29541..30960
Strand	+
Gene length (bp)	1419
Transcript length (bp)	1350
Coding sequence length (bp)	1350
Protein length (aa)	450

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.9E-06	14	50

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm\|Nucleus	Nuclear localization signal	0.702	0.6082	0.1161	0.055	0.2985	0.012	0.1368	0.0893	0.0797	0.0016

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	8739
Change Orthofinder run

Species	Protein ID
Ophiocordyceps subramaniannii	Hirsu2\|1182 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|1182 MGSPSSASLALALPEILVAIFDCLDSPALTAAMRASKKWFTCASDVLWRRAGCEALAAVPEQRRQIYASKITLLA FSGDEDAAYHARFQHLRFSSLKHISLDAYRPSDGSYHIRQYFQPPLESFSFYGGDLDHDLLQQLRAKSWRLRRIL IDSPGAAVQPDFFATFLAEYTSLEHMVFLHGMDHLITDDLMLHLADRPSLSSLMIGKTCSAELLQRISTQVLQPF RALRNLQLTVPSSAVPTLVRLATQLNRLELTVQDADATVVGRLASLTTLRELSLSFSAATELPKHEILSLKKLTQ LEELTVGPDEAEDKAEVTAFQSSFSDTDFDELVSQLRSLRRIRFMIQSNLSVLSLASLAKHCPLLEMCTMPQVFD MSPLSGDDRAKFSFPNLHYLDLGGLERPPSENPSSQELASAMKTAFPKLGEFYVSSDDDYSNDVADAFTASDAS*
Coding	>Hirsu2\|1182 ATGGGCTCGCCGTCCAGCGCCAGCCTGGCCCTGGCCCTGCCCGAGATCCTCGTCGCCATCTTCGACTGCCTCGAC TCGCCGGCGCTGACGGCGGCGATGCGCGCCAGCAAGAAGTGGTTCACGTGCGCGAGTGATGTCCTCTGGCGGCGC GCCGGCTGCGAGGCGCTGGCCGCCGTGCCGGAGCAGCGCCGCCAGATCTACGCCTCCAAGATCACCTTGCTCGCC TTCTCGGGCGACGAGGATGCCGCCTATCACGCCCGCTTCCAACACCTGCGCTTCTCCAGCCTCAAGCACATCTCC CTCGACGCCTACCGACCCAGCGACGGCTCCTACCACATCCGCCAGTACTTCCAGCCCCCGCTCGAGTCTTTCTCC TTCTACGGCGGCGACCTCGACCATGACCTGCTCCAGCAGCTGCGCGCCAAGAGCTGGCGTCTGCGCAGGATTCTC ATCGACTCGCCCGGCGCCGCCGTCCAGCCCGACTTCTTCGCCACCTTTCTCGCCGAGTACACCTCGCTCGAGCAC ATGGTCTTTCTCCACGGCATGGACCACCTCATCACCGACGACCTCATGCTGCATCTCGCGGACCGCCCGAGCCTT TCCAGCCTCATGATCGGGAAAACGTGCTCCGCCGAGCTCCTTCAGCGTATTTCGACCCAAGTCCTCCAGCCCTTC CGGGCGCTGCGAAACCTCCAGCTCACCGTCCCCTCTTCGGCCGTGCCGACTCTCGTCCGGCTGGCCACGCAGCTC AATAGGCTTGAGCTGACGGTTCAAGACGCCGACGCCACCGTTGTGGGCAGGCTCGCCTCTCTAACTACCTTGCGC GAGCTGTCGCTGTCCTTTTCCGCCGCCACAGAACTTCCGAAGCATGAGATTCTGTCCCTGAAGAAGCTGACCCAG CTCGAGGAGCTGACCGTAGGTCCGGATGAAGCGGAAGATAAGGCAGAAGTTACTGCCTTCCAGTCGAGCTTCTCT GACACCGACTTTGACGAGCTTGTTTCCCAGCTCCGCTCTCTGCGGCGTATCCGCTTCATGATCCAGTCAAACCTG TCTGTCCTCTCTCTGGCCTCCCTCGCAAAGCACTGCCCGCTTCTCGAGATGTGTACCATGCCTCAGGTCTTCGAC ATGAGCCCACTGTCCGGCGACGACCGCGCCAAGTTTTCCTTTCCCAACTTGCACTATCTGGACCTTGGTGGTCTT GAAAGACCGCCTTCCGAAAATCCGTCGTCTCAGGAGCTGGCTTCTGCCATGAAAACCGCTTTCCCCAAGTTGGGA GAGTTCTATGTTAGCAGCGATGATGATTACTCCAATGATGTTGCGGATGCCTTTACCGCGTCCGACGCCTCGTGA
Transcript	>Hirsu2\|1182 ATGGGCTCGCCGTCCAGCGCCAGCCTGGCCCTGGCCCTGCCCGAGATCCTCGTCGCCATCTTCGACTGCCTCGAC TCGCCGGCGCTGACGGCGGCGATGCGCGCCAGCAAGAAGTGGTTCACGTGCGCGAGTGATGTCCTCTGGCGGCGC GCCGGCTGCGAGGCGCTGGCCGCCGTGCCGGAGCAGCGCCGCCAGATCTACGCCTCCAAGATCACCTTGCTCGCC TTCTCGGGCGACGAGGATGCCGCCTATCACGCCCGCTTCCAACACCTGCGCTTCTCCAGCCTCAAGCACATCTCC CTCGACGCCTACCGACCCAGCGACGGCTCCTACCACATCCGCCAGTACTTCCAGCCCCCGCTCGAGTCTTTCTCC TTCTACGGCGGCGACCTCGACCATGACCTGCTCCAGCAGCTGCGCGCCAAGAGCTGGCGTCTGCGCAGGATTCTC ATCGACTCGCCCGGCGCCGCCGTCCAGCCCGACTTCTTCGCCACCTTTCTCGCCGAGTACACCTCGCTCGAGCAC ATGGTCTTTCTCCACGGCATGGACCACCTCATCACCGACGACCTCATGCTGCATCTCGCGGACCGCCCGAGCCTT TCCAGCCTCATGATCGGGAAAACGTGCTCCGCCGAGCTCCTTCAGCGTATTTCGACCCAAGTCCTCCAGCCCTTC CGGGCGCTGCGAAACCTCCAGCTCACCGTCCCCTCTTCGGCCGTGCCGACTCTCGTCCGGCTGGCCACGCAGCTC AATAGGCTTGAGCTGACGGTTCAAGACGCCGACGCCACCGTTGTGGGCAGGCTCGCCTCTCTAACTACCTTGCGC GAGCTGTCGCTGTCCTTTTCCGCCGCCACAGAACTTCCGAAGCATGAGATTCTGTCCCTGAAGAAGCTGACCCAG CTCGAGGAGCTGACCGTAGGTCCGGATGAAGCGGAAGATAAGGCAGAAGTTACTGCCTTCCAGTCGAGCTTCTCT GACACCGACTTTGACGAGCTTGTTTCCCAGCTCCGCTCTCTGCGGCGTATCCGCTTCATGATCCAGTCAAACCTG TCTGTCCTCTCTCTGGCCTCCCTCGCAAAGCACTGCCCGCTTCTCGAGATGTGTACCATGCCTCAGGTCTTCGAC ATGAGCCCACTGTCCGGCGACGACCGCGCCAAGTTTTCCTTTCCCAACTTGCACTATCTGGACCTTGGTGGTCTT GAAAGACCGCCTTCCGAAAATCCGTCGTCTCAGGAGCTGGCTTCTGCCATGAAAACCGCTTTCCCCAAGTTGGGA GAGTTCTATGTTAGCAGCGATGATGATTACTCCAATGATGTTGCGGATGCCTTTACCGCGTCCGACGCCTCGTGA
Gene	>Hirsu2\|1182 ATGGGCTCGCCGTCCAGCGCCAGCCTGGCCCTGGCCCTGCCCGAGATCCTCGTCGCCATCTTCGACTGCCTCGAC TCGCCGGCGCTGACGGCGGCGATGCGCGCCAGCAAGAAGTGGTTCACGTGCGCGAGTGATGTCCTCTGGCGGCGC GCCGGCTGCGAGGCGCTGGCCGCCGTGCCGGAGCAGCGCCGCCAGATCTACGCCTCCAAGATCACCTTGCTCGCC TTCTCGGGCGACGAGGATGCCGCCTATCACGCCCGCTTCCAACACCTGCGCTTCTCCAGCCTCAAGCACATCTCC CTCGACGCCTACCGACCCAGCGACGGCTCCTACCACATCCGCCAGTACTTCCAGCCCCCGCTCGAGTCTTTCTCC TTCTACGGCGGCGACCTCGACCATGACCTGCTCCAGCAGCTGCGCGCCAAGAGCTGGCGTCTGCGCAGGATTCTC ATCGACTCGCCCGGCGCCGCCGTCCAGCCCGACTTCTTCGCCACCTTTCTCGCCGAGTACACCTCGCTCGAGCAC ATGGTCTTTCTCCACGGCATGGACCACCTCATCACCGACGACCTCATGCTGCATCTCGCGGACCGCCCGAGCCTT TCCAGCCTCATGATCGGGAAAACGTGCTCCGCCGAGCTCCTTCAGCGTATTTCGACCCAAGTCCTCCAGCCCTTC CGGGCGCTGCGAAACCTCCAGCTCACCGTCCCCTCTTCGGCCGTGCCGACTCTCGTCCGGCTGGCCACGCAGCTC AATAGGCTTGAGCTGACGGTTCAAGACGCCGACGCCACCGTTGTGGGCAGGCTCGCCTCTCTAACTACCTTGCGC GAGCTGTCGCTGTCCTTTTCCGCCGCCACAGAACTTCCGAAGCATGAGATTCTGTCCCTGAAGAAGCTGACCCAG CTCGAGGAGCTGACCGTAGGTCCGGATGAAGCGGAAGATAAGGCAGAAGTTACTGCCTTCCAGTCGAGCTTCTCT GACACCGACTTTGACGAGCTTGTTTCCCAGCTCCGCTCTCTGCGGCGTATCCGCTTCATGATCCAGTCAAACCTG TCTGTCCTCTCTCTGGCCTCCCTCGCAAAGCACTGCCCGCTTCTCGAGATGTGTACCATGCCTCAGGTCTTCGAC ATGAGCCCACTGTCCGGCGACGACCGCGCCAAGTTTTCCTTTCCCAACTTGCACTATCTGGACCTTGGTGGTCTT GAAAGACCGCCTTCCGAGTGAGTCTAGCAGGCGGCGTGAAGCCTCAAATCCCGCTGCCAGGTTGCACAACGCTTA CCTTGCGGCAGAAATCCGTCGTCTCAGGAGCTGGCTTCTGCCATGAAAACCGCTTTCCCCAAGTTGGGAGAGTTC TATGTTAGCAGCGATGATGATTACTCCAATGATGTTGCGGATGCCTTTACCGCGTCCGACGCCTCGTGA

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