Protein ID | Hirsu2|1175 |
Gene name | |
Location | Contig_125:4672..5051 |
Strand | - |
Gene length (bp) | 379 |
Transcript length (bp) | 315 |
Coding sequence length (bp) | 315 |
Protein length (aa) | 105 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0546 | 0.0441 | 0.971 | 0.0417 | 0.0636 | 0.0031 | 0.038 | 0.0571 | 0.0705 | 0.0024 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999782 |
Orthofinder run ID | 4 |
Orthogroup | 6519 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1175 MKFVSTIATVALAFATVAVANPMAEEGLSPRDNILEPRKGCSGNRESSDHCTGKKLGPQNSFHNCKGRDGKCCSK NKDGSEGLDASKGQGREDCGFCWTGKCKA* |
Coding | >Hirsu2|1175 ATGAAGTTCGTCTCGACCATCGCCACCGTTGCCCTCGCCTTCGCGACTGTCGCCGTCGCCAACCCGATGGCCGAG GAGGGCCTCAGCCCCCGCGACAACATCCTCGAGCCTCGCAAGGGCTGCAGCGGCAACCGCGAAAGCAGCGACCAT TGCACCGGCAAAAAGCTGGGGCCTCAGAACTCCTTCCACAACTGCAAGGGCCGTGATGGCAAGTGCTGCTCCAAG AACAAGGACGGAAGCGAGGGCCTGGATGCCAGCAAGGGCCAAGGCAGGGAGGATTGCGGCTTCTGCTGGACGGGC AAGTGCAAGGCTTGA |
Transcript | >Hirsu2|1175 ATGAAGTTCGTCTCGACCATCGCCACCGTTGCCCTCGCCTTCGCGACTGTCGCCGTCGCCAACCCGATGGCCGAG GAGGGCCTCAGCCCCCGCGACAACATCCTCGAGCCTCGCAAGGGCTGCAGCGGCAACCGCGAAAGCAGCGACCAT TGCACCGGCAAAAAGCTGGGGCCTCAGAACTCCTTCCACAACTGCAAGGGCCGTGATGGCAAGTGCTGCTCCAAG AACAAGGACGGAAGCGAGGGCCTGGATGCCAGCAAGGGCCAAGGCAGGGAGGATTGCGGCTTCTGCTGGACGGGC AAGTGCAAGGCTTGA |
Gene | >Hirsu2|1175 ATGAAGTTCGTCTCGACCATCGCCACCGTTGCCCTCGCCTTCGCGACTGTCGCCGTCGCCAACCCGATGGCCGAG GAGGGCCTCAGCCCCCGCGACAACATCCTCGAGCCTCGCAAGGGCTGCAGCGGCAACCGCGAAAGCAGCGACCAT TGCACCGGCAAAAAGCTGGGGCCTCAGAACTCCTTCCACAACTGGTCAGTCTCGCGGCCGGGTCTTTTCTGCTCG CCTTCGTTACTGACTGCTCCTCCTCGCTTGTAGCAAGGGCCGTGATGGCAAGTGCTGCTCCAAGAACAAGGACGG AAGCGAGGGCCTGGATGCCAGCAAGGGCCAAGGCAGGGAGGATTGCGGCTTCTGCTGGACGGGCAAGTGCAAGGC TTGA |