© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1170 |
| Gene name | |
| Location | Contig_1248:6611..7403 |
| Strand | - |
| Gene length (bp) | 792 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0715 | 0.0838 | 0.8393 | 0.4961 | 0.0673 | 0.0068 | 0.1978 | 0.0439 | 0.1423 | 0.0042 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999546 |
| Orthofinder run ID | 4 |
| Orthogroup | 1575 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1170 MRFTTLFVSGALAAAVNGQNTEAVSSPATSAAVAASNTPAATWSATPAQESQTKCVERCAKGDVNCAAHCITVPS PNDDQANQTTQCAARCKQSDGAEIYGRCVQDCITKHYYVASAGTPQASGVAGGSGSSGSGGSSGSGGSSGSGSGS SGDANSPAATGGSEGGNGGDASSTGSNRGSGSGTTRGSGSSASVTPSASGSGARNNAASSSTSSGFAAAVTPGPK LAVMVGALGAAVPVYLAM* |
| Coding | >Hirsu2|1170 ATGCGCTTCACCACGCTGTTCGTCTCGGGCGCGCTCGCCGCGGCCGTCAACGGCCAGAACACCGAGGCCGTCTCG TCGCCCGCCACCTCGGCCGCCGTCGCCGCCTCCAACACGCCCGCCGCCACCTGGTCCGCCACCCCGGCCCAGGAG TCGCAAACCAAGTGTGTCGAGCGGTGCGCCAAGGGCGACGTCAACTGCGCCGCCCACTGCATCACGGTGCCCAGC CCCAACGATGACCAGGCCAACCAGACGACCCAGTGCGCCGCCAGGTGCAAGCAGAGCGACGGTGCCGAAATCTAT GGCAGGTGCGTCCAGGACTGCATCACCAAGCACTACTACGTCGCCTCCGCCGGTACTCCCCAGGCCAGCGGCGTC GCTGGCGGCAGCGGCAGCTCCGGCTCCGGCGGCAGCAGCGGCTCCGGCGGCAGCTCCGGCAGCGGCTCCGGCAGC AGCGGCGACGCCAACTCGCCCGCCGCCACCGGAGGCAGCGAGGGCGGCAACGGCGGCGACGCCTCGTCGACCGGC AGCAACCGCGGCAGCGGCAGCGGCACCACCCGCGGCAGCGGCTCGTCCGCCTCGGTCACGCCCTCTGCCTCCGGC TCCGGTGCGCGCAACAACGCTGCCTCTTCCTCCACCTCGAGCGGATTCGCTGCCGCCGTCACCCCCGGCCCCAAG CTCGCCGTCATGGTCGGCGCCCTCGGCGCTGCCGTCCCCGTCTATCTCGCCATGTAG |
| Transcript | >Hirsu2|1170 ATGCGCTTCACCACGCTGTTCGTCTCGGGCGCGCTCGCCGCGGCCGTCAACGGCCAGAACACCGAGGCCGTCTCG TCGCCCGCCACCTCGGCCGCCGTCGCCGCCTCCAACACGCCCGCCGCCACCTGGTCCGCCACCCCGGCCCAGGAG TCGCAAACCAAGTGTGTCGAGCGGTGCGCCAAGGGCGACGTCAACTGCGCCGCCCACTGCATCACGGTGCCCAGC CCCAACGATGACCAGGCCAACCAGACGACCCAGTGCGCCGCCAGGTGCAAGCAGAGCGACGGTGCCGAAATCTAT GGCAGGTGCGTCCAGGACTGCATCACCAAGCACTACTACGTCGCCTCCGCCGGTACTCCCCAGGCCAGCGGCGTC GCTGGCGGCAGCGGCAGCTCCGGCTCCGGCGGCAGCAGCGGCTCCGGCGGCAGCTCCGGCAGCGGCTCCGGCAGC AGCGGCGACGCCAACTCGCCCGCCGCCACCGGAGGCAGCGAGGGCGGCAACGGCGGCGACGCCTCGTCGACCGGC AGCAACCGCGGCAGCGGCAGCGGCACCACCCGCGGCAGCGGCTCGTCCGCCTCGGTCACGCCCTCTGCCTCCGGC TCCGGTGCGCGCAACAACGCTGCCTCTTCCTCCACCTCGAGCGGATTCGCTGCCGCCGTCACCCCCGGCCCCAAG CTCGCCGTCATGGTCGGCGCCCTCGGCGCTGCCGTCCCCGTCTATCTCGCCATGTAG |
| Gene | >Hirsu2|1170 ATGCGCTTCACCACGCTGTTCGTCTCGGGCGCGCTCGCCGCGGCCGTCAACGGCCAGAACACCGAGGCCGTCTCG TCGCCCGCCACCTCGGCCGCCGTCGCCGCCTCCAACACGCCCGCCGCCACCTGGTCCGCCACCCCGGCCCAGGAG TCGCAAACCAAGTGTGTCGAGCGGTGCGCCAAGGGCGACGTCAACTGCGCCGCCCACTGCATCACGGTATGTCTG ACTGCCGTTGCCCGCCCCGTCACGGGCCCCTGCTGACGCTTGACTCTACAGGTGCCCAGCCCCAACGATGACCAG GCCAACCAGACGACCCAGTGCGCCGCCAGGTGCAAGCAGAGCGACGGTGCCGAAATCTATGGCAGGTGCGTCCAG GACTGCATCACCAAGCACTACTACGTCGCCTCCGCCGGTACTCCCCAGGCCAGCGGCGTCGCTGGCGGCAGCGGC AGCTCCGGCTCCGGCGGCAGCAGCGGCTCCGGCGGCAGCTCCGGCAGCGGCTCCGGCAGCAGCGGCGACGCCAAC TCGCCCGCCGCCACCGGAGGCAGCGAGGGCGGCAACGGCGGCGACGCCTCGTCGACCGGCAGCAACCGCGGCAGC GGCAGCGGCACCACCCGCGGCAGCGGCTCGTCCGCCTCGGTCACGCCCTCTGCCTCCGGCTCCGGTGCGCGCAAC AACGCTGCCTCTTCCTCCACCTCGAGCGGATTCGCTGCCGCCGTCACCCCCGGCCCCAAGCTCGCCGTCATGGTC GGCGCCCTCGGCGCTGCCGTCCCCGTCTATCTCGCCATGTAG |