Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1168
Gene name
LocationContig_1248:3..357
Strand+
Gene length (bp)354
Transcript length (bp)354
Coding sequence length (bp)354
Protein length (aa) 118

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5898 0.3836 0.3094 0.1368 0.2779 0.1561 0.3396 0.2549 0.3424 0.0773

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4892
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6433
Ophiocordyceps australis map64 (Brazil) OphauB2|2119
Ophiocordyceps camponoti-rufipedis Ophun1|5546
Ophiocordyceps kimflemingae Ophio5|7769
Ophiocordyceps subramaniannii Hirsu2|1168 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1168
LLSSSSDDAAAAGASSSPAAGASSSPPRKPLDAAGLSVDDAGTIYDRDGVPVGRMTQPEGPPPPRDSPSASGPAK
APAAAVTPSPSEVYLDVKSTHDGIQLIIKIPTVLNMPRTWST*
Coding >Hirsu2|1168
CTGCTCTCCTCTTCTTCCGACGACGCCGCCGCCGCCGGCGCCTCCTCCTCGCCCGCCGCCGGCGCCTCGTCGTCG
CCGCCGCGGAAACCGCTTGACGCCGCCGGCCTTAGCGTCGACGACGCCGGCACCATCTACGACCGGGACGGCGTC
CCCGTCGGCCGCATGACGCAGCCCGAGGGGCCGCCTCCCCCTCGCGACTCCCCTTCGGCTTCCGGCCCGGCCAAG
GCGCCGGCTGCGGCGGTGACGCCCAGCCCGTCCGAGGTCTACCTCGACGTCAAGTCGACCCACGACGGCATCCAG
CTGATCATCAAGATCCCCACCGTCCTCAATATGCCTCGTACTTGGTCTACATAG
Transcript >Hirsu2|1168
CTGCTCTCCTCTTCTTCCGACGACGCCGCCGCCGCCGGCGCCTCCTCCTCGCCCGCCGCCGGCGCCTCGTCGTCG
CCGCCGCGGAAACCGCTTGACGCCGCCGGCCTTAGCGTCGACGACGCCGGCACCATCTACGACCGGGACGGCGTC
CCCGTCGGCCGCATGACGCAGCCCGAGGGGCCGCCTCCCCCTCGCGACTCCCCTTCGGCTTCCGGCCCGGCCAAG
GCGCCGGCTGCGGCGGTGACGCCCAGCCCGTCCGAGGTCTACCTCGACGTCAAGTCGACCCACGACGGCATCCAG
CTGATCATCAAGATCCCCACCGTCCTCAATATGCCTCGTACTTGGTCTACATAG
Gene >Hirsu2|1168
CTGCTCTCCTCTTCTTCCGACGACGCCGCCGCCGCCGGCGCCTCCTCCTCGCCCGCCGCCGGCGCCTCGTCGTCG
CCGCCGCGGAAACCGCTTGACGCCGCCGGCCTTAGCGTCGACGACGCCGGCACCATCTACGACCGGGACGGCGTC
CCCGTCGGCCGCATGACGCAGCCCGAGGGGCCGCCTCCCCCTCGCGACTCCCCTTCGGCTTCCGGCCCGGCCAAG
GCGCCGGCTGCGGCGGTGACGCCCAGCCCGTCCGAGGTCTACCTCGACGTCAAGTCGACCCACGACGGCATCCAG
CTGATCATCAAGATCCCCACCGTCCTCAATATGCCTCGTACTTGGTCTACATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail