Protein ID | Hirsu2|1167 |
Gene name | |
Location | Contig_1247:5765..7561 |
Strand | + |
Gene length (bp) | 1796 |
Transcript length (bp) | 1740 |
Coding sequence length (bp) | 1740 |
Protein length (aa) | 580 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1315 | 0.1203 | 0.0766 | 0.0612 | 0.8928 | 0.0445 | 0.0457 | 0.0354 | 0.1313 | 0.0088 |
Orthofinder run ID | 4 |
Orthogroup | 1573 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1167 MQASRAACCWRCSLRLSSVAQKPAPARTRVLVARYASSAASPSLEASSSSSAVDARALDARPARRRSPARGLPRP QAADAAVAIFNEVVSQSGEAGDVAAGRQKHSVEWELVAKLTELEGRPVDDPAKLDLFQTDVWPELKKMRGQFPQN LYWSVTQFLGKTCRAAVQQGHVGVSLRLSKMYARLNRYELDTRGLLVLSLCHTIISGQLAPAQRGAVVRELIEMW KHISQLRRPSQKRRNTNQFALPSADEVLSIVESATEGPTNYSSLVKALAGLFNQYRLLQAVPLVPALLASVAVLT DPELTGPSQQIEAAPLLILVAAVLLPEMPDSALVGEALAGRTASFPPSHQSDVRAYVLGRWPQASDALQSADAPW RNAPTALGRHGGLESLGLVGFHQELRDAYVRRDAGRAVSAWRRLKAFLDRDPATGRLLRQDADFLHFCDFCVFLW CALRQPDSLQETLELMDQLELEPTVKTYTAMLHGWKTCKDSGKMTALWDRLVQSGTKLDVHIWTERISGLMEANR PQSGVQALAEMMELWKRAVKEHGADAAADAAVQPNIEVVNAAVTGLHPAQHQHL* |
Coding | >Hirsu2|1167 ATGCAGGCCTCCAGGGCGGCCTGCTGCTGGCGCTGCTCCCTGCGGCTCTCCTCGGTCGCGCAGAAGCCCGCGCCG GCCCGCACACGGGTCCTGGTCGCCCGCTACGCCTCTTCCGCCGCCTCGCCGTCGCTCGAGGCGTCGTCGTCGTCG AGCGCCGTCGATGCCCGTGCGCTCGATGCCCGGCCGGCTCGTCGCAGGAGCCCGGCCCGCGGCCTGCCGCGCCCG CAGGCCGCCGACGCCGCCGTCGCCATCTTCAACGAAGTCGTCTCCCAGTCGGGCGAGGCCGGCGACGTCGCCGCC GGCCGCCAAAAGCACTCGGTTGAATGGGAGCTCGTCGCCAAGCTGACGGAGCTCGAGGGCAGGCCCGTCGACGAC CCGGCCAAGCTCGACCTCTTCCAAACCGACGTCTGGCCCGAGCTCAAGAAGATGCGCGGCCAATTCCCCCAGAAC CTGTACTGGTCCGTCACCCAGTTCCTCGGCAAGACGTGCAGGGCCGCCGTCCAGCAGGGCCACGTCGGCGTCAGC CTGCGGCTGTCCAAGATGTACGCCAGGCTCAACCGATACGAGCTCGACACGCGCGGCCTGCTGGTCCTCAGCCTC TGCCATACCATCATTTCCGGGCAGCTCGCGCCCGCGCAGCGCGGCGCCGTCGTCAGGGAGCTCATCGAAATGTGG AAGCACATCTCCCAGCTCCGCCGCCCCAGCCAGAAACGACGAAACACGAACCAGTTCGCCCTGCCCTCGGCCGAC GAGGTCTTGAGCATCGTCGAAAGCGCCACGGAGGGGCCCACAAACTACTCCTCCCTCGTCAAAGCCCTCGCCGGC CTCTTCAACCAATATAGACTGCTGCAGGCCGTGCCGCTGGTGCCGGCCCTGCTGGCTTCCGTCGCCGTCCTGACC GATCCCGAACTGACCGGGCCGAGCCAGCAGATCGAGGCCGCGCCCCTGCTGATCCTGGTCGCCGCCGTCCTGCTG CCCGAGATGCCAGACAGCGCTCTTGTGGGAGAGGCGCTCGCCGGCAGGACGGCGTCCTTCCCCCCTTCCCACCAG TCGGACGTGCGGGCCTACGTCCTCGGCCGCTGGCCGCAGGCCTCGGACGCGCTGCAGTCGGCCGACGCGCCGTGG CGGAACGCCCCCACCGCCCTGGGGCGCCACGGTGGCCTCGAGTCCCTGGGCCTCGTCGGCTTCCACCAGGAGCTC CGCGACGCCTACGTCCGCCGGGATGCCGGCCGCGCCGTGTCCGCCTGGAGGAGGCTCAAGGCCTTCCTGGACCGG GACCCGGCCACGGGCAGGCTCCTGCGCCAGGACGCCGACTTCCTCCATTTCTGCGACTTCTGCGTCTTCCTCTGG TGCGCCCTGCGGCAGCCGGACTCGCTGCAGGAGACGCTCGAGCTGATGGACCAGCTCGAGCTCGAGCCGACCGTC AAGACGTACACGGCCATGCTGCACGGCTGGAAGACGTGCAAGGACTCGGGCAAGATGACGGCGCTCTGGGACCGA CTCGTCCAGTCCGGCACCAAGCTCGACGTCCACATCTGGACCGAGCGCATCTCGGGCCTCATGGAGGCCAACAGG CCCCAGTCCGGCGTCCAGGCGCTGGCCGAGATGATGGAGCTGTGGAAGAGGGCGGTCAAGGAGCACGGCGCCGAC GCCGCCGCCGACGCCGCCGTGCAGCCCAACATCGAGGTCGTCAACGCCGCCGTGACAGGCCTGCATCCGGCCCAA CATCAGCACCTTTAA |
Transcript | >Hirsu2|1167 ATGCAGGCCTCCAGGGCGGCCTGCTGCTGGCGCTGCTCCCTGCGGCTCTCCTCGGTCGCGCAGAAGCCCGCGCCG GCCCGCACACGGGTCCTGGTCGCCCGCTACGCCTCTTCCGCCGCCTCGCCGTCGCTCGAGGCGTCGTCGTCGTCG AGCGCCGTCGATGCCCGTGCGCTCGATGCCCGGCCGGCTCGTCGCAGGAGCCCGGCCCGCGGCCTGCCGCGCCCG CAGGCCGCCGACGCCGCCGTCGCCATCTTCAACGAAGTCGTCTCCCAGTCGGGCGAGGCCGGCGACGTCGCCGCC GGCCGCCAAAAGCACTCGGTTGAATGGGAGCTCGTCGCCAAGCTGACGGAGCTCGAGGGCAGGCCCGTCGACGAC CCGGCCAAGCTCGACCTCTTCCAAACCGACGTCTGGCCCGAGCTCAAGAAGATGCGCGGCCAATTCCCCCAGAAC CTGTACTGGTCCGTCACCCAGTTCCTCGGCAAGACGTGCAGGGCCGCCGTCCAGCAGGGCCACGTCGGCGTCAGC CTGCGGCTGTCCAAGATGTACGCCAGGCTCAACCGATACGAGCTCGACACGCGCGGCCTGCTGGTCCTCAGCCTC TGCCATACCATCATTTCCGGGCAGCTCGCGCCCGCGCAGCGCGGCGCCGTCGTCAGGGAGCTCATCGAAATGTGG AAGCACATCTCCCAGCTCCGCCGCCCCAGCCAGAAACGACGAAACACGAACCAGTTCGCCCTGCCCTCGGCCGAC GAGGTCTTGAGCATCGTCGAAAGCGCCACGGAGGGGCCCACAAACTACTCCTCCCTCGTCAAAGCCCTCGCCGGC CTCTTCAACCAATATAGACTGCTGCAGGCCGTGCCGCTGGTGCCGGCCCTGCTGGCTTCCGTCGCCGTCCTGACC GATCCCGAACTGACCGGGCCGAGCCAGCAGATCGAGGCCGCGCCCCTGCTGATCCTGGTCGCCGCCGTCCTGCTG CCCGAGATGCCAGACAGCGCTCTTGTGGGAGAGGCGCTCGCCGGCAGGACGGCGTCCTTCCCCCCTTCCCACCAG TCGGACGTGCGGGCCTACGTCCTCGGCCGCTGGCCGCAGGCCTCGGACGCGCTGCAGTCGGCCGACGCGCCGTGG CGGAACGCCCCCACCGCCCTGGGGCGCCACGGTGGCCTCGAGTCCCTGGGCCTCGTCGGCTTCCACCAGGAGCTC CGCGACGCCTACGTCCGCCGGGATGCCGGCCGCGCCGTGTCCGCCTGGAGGAGGCTCAAGGCCTTCCTGGACCGG GACCCGGCCACGGGCAGGCTCCTGCGCCAGGACGCCGACTTCCTCCATTTCTGCGACTTCTGCGTCTTCCTCTGG TGCGCCCTGCGGCAGCCGGACTCGCTGCAGGAGACGCTCGAGCTGATGGACCAGCTCGAGCTCGAGCCGACCGTC AAGACGTACACGGCCATGCTGCACGGCTGGAAGACGTGCAAGGACTCGGGCAAGATGACGGCGCTCTGGGACCGA CTCGTCCAGTCCGGCACCAAGCTCGACGTCCACATCTGGACCGAGCGCATCTCGGGCCTCATGGAGGCCAACAGG CCCCAGTCCGGCGTCCAGGCGCTGGCCGAGATGATGGAGCTGTGGAAGAGGGCGGTCAAGGAGCACGGCGCCGAC GCCGCCGCCGACGCCGCCGTGCAGCCCAACATCGAGGTCGTCAACGCCGCCGTGACAGGCCTGCATCCGGCCCAA CATCAGCACCTTTAA |
Gene | >Hirsu2|1167 ATGCAGGCCTCCAGGGCGGCCTGCTGCTGGCGCTGCTCCCTGCGGCTCTCCTCGGTCGCGCAGAAGCCCGCGCCG GCCCGCACACGGGTCCTGGTCGCCCGCTACGCCTCTTCCGCCGCCTCGCCGTCGCTCGAGGCGTCGTCGTCGTCG AGCGCCGTCGATGCCCGTGCGCTCGATGCCCGGCCGGCTCGTCGCAGGAGCCCGGCCCGCGGCCTGCCGCGCCCG CAGGCCGCCGACGCCGCCGTCGCCATCTTCAACGAAGTCGTCTCCCAGTCGGGCGAGGCCGGCGACGTCGCCGCC GGCCGCCAAAAGCACTCGGTTGAATGGGAGCTCGTCGCCAAGCTGACGGAGCTCGAGGGCAGGCCCGTCGACGAC CCGGCCAAGCTCGACCTCTTCCAAACCGACGTCTGGCCCGAGCTCAAGAAGATGCGCGGCCAATTCCCCCAGAAC CTGTACTGGTCCGTCACCCAGTTCCTCGGCAAGACGTGCAGGGCCGCCGTCCAGCAGGGCCACGTCGGCGTCAGC CTGCGGCTGTCCAAGATGTACGCCAGGCTCAACCGATACGAGCTCGACACGCGCGGCCTGCTGGTCCTCAGCCTC TGCCATACCATCATTTCCGGGCAGCTCGCGCCCGCGCAGCGCGGCGCCGTCGTCAGGGAGCTCATCGAAATGTGG AAGCACATCTCCCAGCTCCGCCGCCCCAGCCAGAAACGACGAAACACGAACCAGTTCGCCCTGCCCTCGGCCGAC GAGGTCTTGAGCATCGTCGAAAGCGCCACGGAGGGGCCCACAAACTACTCCTCCCTCGTCAAAGCCCTCGCCGGC CTCTTCAACCAATATAGACTGCTGCAGGCCGTGCCGCTGGTGCCGGCCCTGCTGGCTTCCGTCGCCGTCCTGACC GATCCCGAACTGACCGGGCCGAGCCAGCAGATCGAGGCCGCGCCCCTGCTGATCCTGGTCGCCGCCGTCCTGCTG CCCGAGATGCCAGACAGCGCTCTTGTGGGAGAGGCGCTCGCCGGCAGGACGGCGTCCTTCCCCCCTTCCCACCAG TCGGACGTGCGGGCCTACGTCCTCGGCCGCTGGCCGCAGGCCTCGGACGCGCTGCAGTCGGCCGACGCGCCGTGG CGGAACGCCCCCACCGCCCTGGGGCGCCACGGTGGCCTCGAGTCCCTGGGCCTCGTCGGCTTCCACCAGGAGCTC CGCGACGCCTACGTCCGCCGGGATGCCGGCCGCGCCGTGTCCGCCTGGAGGAGGCTCAAGGCCTTCCTGGACCGG GACCCGGCCACGGGCAGGCTCCTGCGCCAGGACGCCGACTTCCTCCATTTCTGCGACTTCTGCGTCTTCCTCTGG TGCGCCCTGCGGCAGCCGGACTCGCTGCAGGAGACGCTCGAGCTGATGGACCAGCTCGAGCTCGAGCCGACCGTC AAGACGTACACGGCCATGCTGCACGGCTGGAAGACGTGCAAGGACTCGGGCAAGATGACGGCGCTCTGGGACCGA CTCGTCCAGTCCGGCACCAAGCTCGACGTCCACATCTGGACCGAGCGCATCTCGGGCCTCATGGAGGCCAACAGG CCCCAGTCCGGCGTCCAGGCGCTGGCCGAGATGATGGAGCTGTGGAAGAGGGCGGTCAAGGAGCACGGCGCCGAC GCCGCCGCCGACGCCGCCGTGCAGCCCAACATCGAGGTCGTCAACGCCGCCGTGACAGGCCTGTTCCGCCACGAC GCCAAGGCCGCGCGCGAGCTGCTCACCTGGGCGTCGGGCCAAGGCATCCGGCCCAACATCAGCACCTTTAA |