© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1166 |
| Gene name | |
| Location | Contig_1247:4108..5089 |
| Strand | + |
| Gene length (bp) | 981 |
| Transcript length (bp) | 783 |
| Coding sequence length (bp) | 783 |
| Protein length (aa) | 261 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02798 | GST_N | Glutathione S-transferase, N-terminal domain | 9.3E-10 | 9 | 85 |
| PF13409 | GST_N_2 | Glutathione S-transferase, N-terminal domain | 2.7E-06 | 18 | 87 |
| PF13410 | GST_C_2 | Glutathione S-transferase, C-terminal domain | 6.5E-06 | 169 | 235 |
| PF13417 | GST_N_3 | Glutathione S-transferase, N-terminal domain | 9.1E-06 | 18 | 90 |
| PF14497 | GST_C_3 | Glutathione S-transferase, C-terminal domain | 1.1E-04 | 165 | 238 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40582|GST1_YEAST | Glutathione S-transferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTT1 PE=1 SV=1 | 5 | 256 | 4.0E-30 |
| sp|Q9P6M1|GST3_SCHPO | Glutathione S-transferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gst3 PE=1 SV=3 | 8 | 217 | 5.0E-28 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0006749 | glutathione metabolic process | Yes |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0005488 | binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006790 | sulfur compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Peroxisomal targeting signal | 0.6406 | 0.3594 | 0.0326 | 0.0412 | 0.4034 | 0.0447 | 0.0835 | 0.4137 | 0.3523 | 0.2903 |
| Orthofinder run ID | 4 |
| Orthogroup | 6026 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1166 MDKPLPKIKLHWLNQSRSQRIVWLLEELGAPYEIQVYHRDGRTMLAPPALARVHPLGKSPVVSVSPPGGGDDVVL AESGFMTQYLCEHLPGGARLVPPRWRDGCEGEVGGETEAWMRYQYLLHYAEGSLMPILVMALVLSRLKSTDVPFL VRPITSAAANAVLARFVFPNAQKHLRLLEDMLAAGDYLCGDALTAADILMSFPLLAARDRWDDMGRWEGGSWAAT HPRLVAYVARLEACEGYRRSVDRIEAVDGKFTAAL* |
| Coding | >Hirsu2|1166 ATGGACAAGCCTCTGCCCAAGATCAAGCTCCACTGGCTCAACCAGTCGCGGTCGCAGCGGATCGTCTGGCTGCTG GAGGAGCTGGGGGCGCCGTACGAGATCCAAGTCTACCACCGCGACGGCCGGACGATGCTGGCGCCGCCGGCGCTC GCCCGCGTCCACCCGCTCGGCAAGTCGCCCGTCGTCAGCGTCTCGCCGCCCGGCGGCGGCGACGACGTCGTCTTG GCCGAGAGCGGCTTCATGACGCAGTACCTGTGCGAGCACCTGCCTGGCGGCGCGCGCCTTGTGCCGCCGCGCTGG AGGGACGGGTGTGAGGGCGAGGTTGGTGGCGAGACGGAGGCGTGGATGCGGTATCAGTACTTGCTGCACTATGCT GAGGGGAGCTTGATGCCCATCCTCGTCATGGCCCTCGTCCTCTCCCGCCTCAAGTCCACCGACGTGCCGTTCCTG GTGCGCCCCATCACGTCGGCGGCCGCCAACGCCGTCCTGGCCCGCTTCGTCTTCCCCAACGCGCAAAAGCACCTG CGCCTGCTCGAGGACATGCTCGCCGCCGGCGACTACCTGTGCGGCGACGCGCTGACCGCCGCCGACATCCTCATG AGCTTCCCGCTGCTCGCCGCCCGCGACCGCTGGGACGACATGGGCCGCTGGGAAGGCGGCTCCTGGGCCGCCACC CACCCGCGCCTCGTCGCCTATGTCGCCCGCCTCGAGGCCTGTGAGGGCTACCGCCGCAGCGTCGACCGCATCGAG GCCGTTGACGGCAAGTTCACGGCTGCCCTGTGA |
| Transcript | >Hirsu2|1166 ATGGACAAGCCTCTGCCCAAGATCAAGCTCCACTGGCTCAACCAGTCGCGGTCGCAGCGGATCGTCTGGCTGCTG GAGGAGCTGGGGGCGCCGTACGAGATCCAAGTCTACCACCGCGACGGCCGGACGATGCTGGCGCCGCCGGCGCTC GCCCGCGTCCACCCGCTCGGCAAGTCGCCCGTCGTCAGCGTCTCGCCGCCCGGCGGCGGCGACGACGTCGTCTTG GCCGAGAGCGGCTTCATGACGCAGTACCTGTGCGAGCACCTGCCTGGCGGCGCGCGCCTTGTGCCGCCGCGCTGG AGGGACGGGTGTGAGGGCGAGGTTGGTGGCGAGACGGAGGCGTGGATGCGGTATCAGTACTTGCTGCACTATGCT GAGGGGAGCTTGATGCCCATCCTCGTCATGGCCCTCGTCCTCTCCCGCCTCAAGTCCACCGACGTGCCGTTCCTG GTGCGCCCCATCACGTCGGCGGCCGCCAACGCCGTCCTGGCCCGCTTCGTCTTCCCCAACGCGCAAAAGCACCTG CGCCTGCTCGAGGACATGCTCGCCGCCGGCGACTACCTGTGCGGCGACGCGCTGACCGCCGCCGACATCCTCATG AGCTTCCCGCTGCTCGCCGCCCGCGACCGCTGGGACGACATGGGCCGCTGGGAAGGCGGCTCCTGGGCCGCCACC CACCCGCGCCTCGTCGCCTATGTCGCCCGCCTCGAGGCCTGTGAGGGCTACCGCCGCAGCGTCGACCGCATCGAG GCCGTTGACGGCAAGTTCACGGCTGCCCTGTGA |
| Gene | >Hirsu2|1166 ATGGACAAGCCTCTGCCCAAGATCAAGCTCCACTGGTGCGCGCGAGGCCCCCCCTCCCCCCCTTCGAGTCGGCCG GAGGCTGTCTGACTGACCGACGACCCTTCTTCCTGGCTCAGGCTCAACCAGTCGCGGTCGCAGCGGATCGTCTGG CTGCTGGAGGAGCTGGGGGCGCCGTACGAGATCCAAGTCTACCACCGCGACGGCCGGACGATGCTGGCGCCGCCG GCGCTCGCCCGCGTCCACCCGCTCGGCAAGTCGCCCGTCGTCAGCGTCTCGCCGCCCGGCGGCGGCGACGACGTC GTCTTGGCCGAGAGCGGCTTCATGACGCAGTACCTGTGCGAGCACCTGCCTGGCGGCGCGCGCCTTGTGCCGCCG CGCTGGAGGGACGGGTGTGAGGGCGAGGTTGGTGGCGAGACGGAGGCGTGGATGCGGTATCAGTACTTGCTGCAC TATGCTGAGGGGAGCTTGATGCCCATCCTCGTCATGGCCCTCGTCCTCTCCCGTGCGTCCTCTCCCTTCTCTCTC TCTCTCTCCCTCTGTCTCTGTCTCATACACACACACACACACACTCTCTCTCTCTCTAGACATATACAACCGTCC CCGCTCACGCGCCTCGCAGGCCTCAAGTCCACCGACGTGCCGTTCCTGGTGCGCCCCATCACGTCGGCGGCCGCC AACGCCGTCCTGGCCCGCTTCGTCTTCCCCAACGCGCAAAAGCACCTGCGCCTGCTCGAGGACATGCTCGCCGCC GGCGACTACCTGTGCGGCGACGCGCTGACCGCCGCCGACATCCTCATGAGCTTCCCGCTGCTCGCCGCCCGCGAC CGCTGGGACGACATGGGCCGCTGGGAAGGCGGCTCCTGGGCCGCCACCCACCCGCGCCTCGTCGCCTATGTCGCC CGCCTCGAGGCCTGTGAGGGCTACCGCCGCAGCGTCGACCGCATCGAGGCCGTTGACGGCAAGTTCACGGCTGCC CTGTGA |