Protein ID | Hirsu2|1165 |
Gene name | |
Location | Contig_1247:26..2726 |
Strand | + |
Gene length (bp) | 2700 |
Transcript length (bp) | 2583 |
Coding sequence length (bp) | 2583 |
Protein length (aa) | 861 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF15613 | WSD | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1.2E-16 | 614 | 740 |
PF02791 | DDT | DDT domain | 1.3E-15 | 190 | 247 |
PF15612 | WHIM1 | WSTF, HB1, Itc1p, MBD9 motif 1 | 3.4E-09 | 391 | 424 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53125|ITC1_YEAST | Imitation switch two complex protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ITC1 PE=1 SV=1 | 584 | 709 | 3.0E-07 |
sp|Q08964|YP216_YEAST | Putative ISWI chromatin-remodeling complex subunit YPL216W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL216W PE=1 SV=1 | 599 | 674 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.2129 | 0.9417 | 0.0799 | 0.0609 | 0.0868 | 0.0412 | 0.0562 | 0.0087 | 0.0415 | 0.0014 |
Transcription Factor Class (based on PFAM domains) |
---|
DDT |
Orthofinder run ID | 4 |
Orthogroup | 1572 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1165 MLRSFIKKTVIREAWTGAPWLVKHDYAGQYHIDTRVPPHLRYDTKVQERRQLQAQKRAPAPDLNGHASALHSGPV RLPELKPAPKSHKAKQGQNAAKGLKWPLNMSLNGANGAASAYPLDHSDGHRAVLREPTPPPPPPPPPKYPIDDLQ LEPREGSVRPRLKFMCRDPPADVEAAAAAGPPCDRIDMASVGALLETWDTLNVYCEIFRLDSFTFDDFVEAMTVA SERVHVQLFEEIHCAVLKILVDAEADGGRVRITLPELEEEAGDGAGAGDGESAEPTPEPEPKPAGRATRSSLAKL EAERLAAEAAAAEEESLRAELESKHRAEELLKEYDWVEHLRKREFAHGGWQRIIVGLLHQLSKNERRAAACEALL LRLVPPNTNPTQEAVRQTYASLDINHRVQALQILCMLTMETKAVRGYMEDCSETMTKYRKDRIEWQRQRKQAIED LRQLNEERKSLMPDTGPADDLIHNLKKEDDLKMADADESQIDREGDAEGSGDDDDNNNNNNNNNNNNNNNNAKSH KKRRGRVQSEKQRKREEERERKAREKEKEREREREKEKEHKGSGKLPPQQMKQYNKILKEIQKREDVIKVCEGEI AVIENDLREADCPRTRVMGKDRFWNRYYWFERNGMPYAGLPNSSTAFAEYANGCIWVQGPDELEREGYIDVPAEL QNEYKARFNMTIAERKATEEGGTSVSNAQQWGYICEPEDVDQLIRWLDPRGFNELKLRKELLNYKDKIAAHMEKR KQYLAVPAAAAAAAAAGSASEAGSSTAAAANERGNKKDESAAKRTSSRIRDKTPEPPSYRCLRWENTMALEELGH LHGEQPPPPRPRKQTKKREAMGEPAGKGATKSRRR* |
Coding | >Hirsu2|1165 ATGCTCCGCTCCTTCATCAAGAAGACGGTCATCCGCGAGGCCTGGACCGGCGCCCCCTGGCTCGTCAAGCACGAC TACGCCGGCCAGTACCACATCGACACCCGAGTGCCCCCCCACCTCCGCTACGATACCAAGGTCCAGGAGCGCCGC CAGCTGCAGGCCCAGAAGCGCGCCCCCGCCCCCGACCTCAACGGACACGCCTCCGCCCTGCACTCCGGCCCCGTC CGCCTGCCCGAGCTGAAGCCCGCGCCTAAGAGTCACAAGGCCAAGCAGGGGCAGAACGCCGCCAAGGGCCTCAAG TGGCCCCTCAACATGTCGCTCAACGGCGCCAACGGCGCCGCCTCCGCCTACCCCCTCGACCACTCCGACGGCCAC CGTGCCGTTTTACGAGAACCGACCCCGCCCCCGCCCCCGCCCCCGCCGCCCAAGTATCCCATCGACGACCTCCAG CTGGAGCCCCGGGAGGGCAGCGTGCGCCCGCGCCTCAAGTTCATGTGCAGAGACCCTCCCGCCGACGTCGAAGCC GCCGCCGCCGCCGGGCCCCCGTGCGACCGGATCGACATGGCGTCGGTCGGCGCGCTGCTCGAGACGTGGGACACG CTCAACGTCTACTGCGAGATCTTCCGCCTCGACTCCTTCACCTTTGACGACTTCGTCGAGGCCATGACGGTCGCC TCCGAGCGCGTCCACGTCCAGCTGTTCGAGGAGATCCACTGCGCCGTGCTCAAGATCCTGGTCGACGCCGAGGCC GACGGCGGCAGGGTGCGCATCACCCTGCCCGAGCTGGAGGAGGAGGCCGGCGACGGCGCCGGCGCCGGCGACGGC GAGAGCGCGGAGCCGACGCCCGAGCCCGAGCCGAAACCCGCCGGCCGCGCCACCCGCAGCAGCCTTGCTAAACTC GAGGCCGAGCGCCTCGCCGCCGAGGCCGCCGCCGCCGAGGAGGAGAGCCTCAGGGCCGAGCTTGAGTCGAAGCAC CGCGCCGAGGAGCTTCTCAAGGAGTACGACTGGGTCGAGCACCTGCGCAAGCGGGAGTTCGCCCACGGCGGCTGG CAGCGCATCATCGTCGGCCTGCTGCACCAGCTGTCCAAGAACGAGCGGCGCGCGGCCGCCTGCGAGGCCCTCCTG CTGCGGCTGGTGCCGCCCAACACGAACCCGACGCAGGAGGCGGTCCGGCAGACGTACGCGAGCCTCGACATCAAC CACCGCGTCCAGGCGCTGCAGATCCTGTGCATGCTCACCATGGAGACCAAGGCCGTCAGGGGCTACATGGAGGAC TGCAGCGAGACGATGACCAAGTATCGCAAGGACAGGATCGAGTGGCAGAGGCAGCGGAAACAAGCAATCGAAGAT CTTCGGCAGCTCAACGAGGAGCGCAAGTCGCTGATGCCCGACACGGGGCCGGCGGACGATCTGATCCACAACCTC AAGAAGGAAGACGACCTCAAGATGGCCGACGCAGACGAATCGCAAATCGACAGGGAGGGCGACGCAGAGGGCAGC GGCGACGACGACGACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACGCCAAGTCGCAC AAGAAGCGCCGCGGCCGGGTCCAGTCGGAGAAGCAGCGGAAACGAGAGGAGGAGCGGGAACGAAAGGCGCGAGAG AAGGAAAAGGAGAGGGAGAGGGAGAGGGAAAAGGAAAAGGAGCACAAGGGGTCGGGCAAGCTGCCGCCGCAGCAG ATGAAGCAGTACAACAAGATTCTCAAGGAGATCCAAAAAAGGGAGGACGTCATCAAGGTGTGCGAGGGCGAGATC GCCGTCATCGAAAACGACCTGCGCGAGGCCGACTGCCCGAGGACGCGGGTGATGGGCAAGGACCGGTTCTGGAAC CGGTACTACTGGTTCGAGCGCAACGGGATGCCGTACGCGGGGCTGCCCAACAGCTCGACGGCCTTCGCCGAGTAC GCCAACGGCTGCATATGGGTGCAGGGGCCGGACGAGCTCGAGCGGGAGGGCTACATCGACGTGCCGGCGGAGCTG CAGAACGAGTACAAGGCGCGCTTCAACATGACGATAGCGGAGCGCAAGGCGACGGAGGAGGGCGGGACGAGCGTG TCCAACGCGCAGCAGTGGGGCTACATCTGCGAGCCCGAGGACGTGGACCAGCTGATCCGGTGGCTGGACCCGCGG GGCTTCAACGAGCTGAAGCTGCGCAAGGAGCTGCTCAACTACAAGGACAAGATCGCGGCGCACATGGAGAAGCGG AAGCAGTATCTGGCGGTGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGGCATCAGAAGCAGGCTCCTCG ACGGCGGCGGCGGCGAACGAGAGAGGCAATAAGAAGGACGAGTCGGCGGCGAAGCGGACGAGCTCGCGGATCCGG GACAAGACGCCGGAGCCGCCGAGCTACCGCTGCCTGCGGTGGGAGAACACGATGGCGCTCGAGGAGCTGGGCCAC CTGCACGGGGAGCAGCCGCCGCCGCCGCGGCCGAGGAAGCAGACGAAGAAGCGCGAGGCGATGGGGGAGCCGGCG GGCAAGGGGGCGACGAAGAGCCGGCGGCGGTAG |
Transcript | >Hirsu2|1165 ATGCTCCGCTCCTTCATCAAGAAGACGGTCATCCGCGAGGCCTGGACCGGCGCCCCCTGGCTCGTCAAGCACGAC TACGCCGGCCAGTACCACATCGACACCCGAGTGCCCCCCCACCTCCGCTACGATACCAAGGTCCAGGAGCGCCGC CAGCTGCAGGCCCAGAAGCGCGCCCCCGCCCCCGACCTCAACGGACACGCCTCCGCCCTGCACTCCGGCCCCGTC CGCCTGCCCGAGCTGAAGCCCGCGCCTAAGAGTCACAAGGCCAAGCAGGGGCAGAACGCCGCCAAGGGCCTCAAG TGGCCCCTCAACATGTCGCTCAACGGCGCCAACGGCGCCGCCTCCGCCTACCCCCTCGACCACTCCGACGGCCAC CGTGCCGTTTTACGAGAACCGACCCCGCCCCCGCCCCCGCCCCCGCCGCCCAAGTATCCCATCGACGACCTCCAG CTGGAGCCCCGGGAGGGCAGCGTGCGCCCGCGCCTCAAGTTCATGTGCAGAGACCCTCCCGCCGACGTCGAAGCC GCCGCCGCCGCCGGGCCCCCGTGCGACCGGATCGACATGGCGTCGGTCGGCGCGCTGCTCGAGACGTGGGACACG CTCAACGTCTACTGCGAGATCTTCCGCCTCGACTCCTTCACCTTTGACGACTTCGTCGAGGCCATGACGGTCGCC TCCGAGCGCGTCCACGTCCAGCTGTTCGAGGAGATCCACTGCGCCGTGCTCAAGATCCTGGTCGACGCCGAGGCC GACGGCGGCAGGGTGCGCATCACCCTGCCCGAGCTGGAGGAGGAGGCCGGCGACGGCGCCGGCGCCGGCGACGGC GAGAGCGCGGAGCCGACGCCCGAGCCCGAGCCGAAACCCGCCGGCCGCGCCACCCGCAGCAGCCTTGCTAAACTC GAGGCCGAGCGCCTCGCCGCCGAGGCCGCCGCCGCCGAGGAGGAGAGCCTCAGGGCCGAGCTTGAGTCGAAGCAC CGCGCCGAGGAGCTTCTCAAGGAGTACGACTGGGTCGAGCACCTGCGCAAGCGGGAGTTCGCCCACGGCGGCTGG CAGCGCATCATCGTCGGCCTGCTGCACCAGCTGTCCAAGAACGAGCGGCGCGCGGCCGCCTGCGAGGCCCTCCTG CTGCGGCTGGTGCCGCCCAACACGAACCCGACGCAGGAGGCGGTCCGGCAGACGTACGCGAGCCTCGACATCAAC CACCGCGTCCAGGCGCTGCAGATCCTGTGCATGCTCACCATGGAGACCAAGGCCGTCAGGGGCTACATGGAGGAC TGCAGCGAGACGATGACCAAGTATCGCAAGGACAGGATCGAGTGGCAGAGGCAGCGGAAACAAGCAATCGAAGAT CTTCGGCAGCTCAACGAGGAGCGCAAGTCGCTGATGCCCGACACGGGGCCGGCGGACGATCTGATCCACAACCTC AAGAAGGAAGACGACCTCAAGATGGCCGACGCAGACGAATCGCAAATCGACAGGGAGGGCGACGCAGAGGGCAGC GGCGACGACGACGACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACGCCAAGTCGCAC AAGAAGCGCCGCGGCCGGGTCCAGTCGGAGAAGCAGCGGAAACGAGAGGAGGAGCGGGAACGAAAGGCGCGAGAG AAGGAAAAGGAGAGGGAGAGGGAGAGGGAAAAGGAAAAGGAGCACAAGGGGTCGGGCAAGCTGCCGCCGCAGCAG ATGAAGCAGTACAACAAGATTCTCAAGGAGATCCAAAAAAGGGAGGACGTCATCAAGGTGTGCGAGGGCGAGATC GCCGTCATCGAAAACGACCTGCGCGAGGCCGACTGCCCGAGGACGCGGGTGATGGGCAAGGACCGGTTCTGGAAC CGGTACTACTGGTTCGAGCGCAACGGGATGCCGTACGCGGGGCTGCCCAACAGCTCGACGGCCTTCGCCGAGTAC GCCAACGGCTGCATATGGGTGCAGGGGCCGGACGAGCTCGAGCGGGAGGGCTACATCGACGTGCCGGCGGAGCTG CAGAACGAGTACAAGGCGCGCTTCAACATGACGATAGCGGAGCGCAAGGCGACGGAGGAGGGCGGGACGAGCGTG TCCAACGCGCAGCAGTGGGGCTACATCTGCGAGCCCGAGGACGTGGACCAGCTGATCCGGTGGCTGGACCCGCGG GGCTTCAACGAGCTGAAGCTGCGCAAGGAGCTGCTCAACTACAAGGACAAGATCGCGGCGCACATGGAGAAGCGG AAGCAGTATCTGGCGGTGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGGCATCAGAAGCAGGCTCCTCG ACGGCGGCGGCGGCGAACGAGAGAGGCAATAAGAAGGACGAGTCGGCGGCGAAGCGGACGAGCTCGCGGATCCGG GACAAGACGCCGGAGCCGCCGAGCTACCGCTGCCTGCGGTGGGAGAACACGATGGCGCTCGAGGAGCTGGGCCAC CTGCACGGGGAGCAGCCGCCGCCGCCGCGGCCGAGGAAGCAGACGAAGAAGCGCGAGGCGATGGGGGAGCCGGCG GGCAAGGGGGCGACGAAGAGCCGGCGGCGGTAG |
Gene | >Hirsu2|1165 ATGCTCCGCTCCTTCATCAAGAAGACGGTCATCCGCGAGGCCTGGACCGGCGCCCCCTGGCTCGTCAAGCACGAC TACGCCGGCCAGTACCACATCGACACCCGAGTGCCCCCCCACCTCCGCTACGATACCAAGGTCCAGGAGCGCCGC CAGCTGCAGGCCCAGAAGCGCGCCCCCGCCCCCGACCTCAACGGACACGCCTCCGCCCTGCACTCCGGCCCCGTC CGCCTGCCCGAGCTGAAGCCCGCGCCTAAGAGTCACAAGGCCAAGCAGGGGCAGAACGCCGCCAAGGGCCTCAAG TGGCCCCTCAACATGTCGCTCAACGGCGCCAACGGCGCCGCCTCCGCCTACCCCCTCGACCACTCCGACGGCCAC CGTGCCGTTTTACGAGAACCGACCCCGCCCCCGCCCCCGCCCCCGCCGCCCAAGTATCCCATCGACGACCTCCAG CTGGAGCCCCGGGAGGGCAGCGTGCGCCCGCGCCTCAAGTTCATGTGCAGAGACCCTCCCGCCGACGTCGAAGCC GCCGCCGCCGCCGGGCCCCCGTGCGACCGGATCGACATGGCGTCGGTCGGCGCGCTGCTCGAGACGTGGGACACG CTCAACGTCTACTGCGAGATCTTCCGCCTCGACTCCTTCACCTTTGACGACTTCGTCGAGGCCATGACGGTCGCC TCCGAGCGCGTCCACGTCCAGCTGTTCGAGGAGATCCACTGCGCCGTGCTCAAGATCCTGGTCGACGCCGAGGCC GACGGCGGCAGGGTGCGCATCACCCTGCCCGAGCTGGAGGAGGAGGCCGGCGACGGCGCCGGCGCCGGCGACGGC GAGAGCGCGGAGCCGACGCCCGAGCCCGAGCCGAAACCCGCCGGCCGCGCCACCCGCAGCAGCCTTGCTAAACTC GAGGCCGAGCGCCTCGCCGCCGAGGCCGCCGCCGCCGAGGAGGAGAGCCTCAGGGCCGAGCTTGAGTCGAAGCAC CGCGCCGAGGAGCTTCTCAAGGAGTACGACTGGGTCGAGCACCTGCGCAAGCGGGAGTTCGCCCACGGCGGCTGG CAGCGCATCATCGTCGGCCTGCTGCACCAGCTGTCCAAGAACGAGCGGCGCGCGGCCGCCTGCGAGGCCCTCCTG CTGCGGCTGGTGCCGCCCAACACGAACCCGACGCAGGAGGCGGTCCGGCAGACGTACGCGAGCCTCGACATCAAC CACCGCGTCCAGGCGCTGCAGATCCTGTGCATGCTCACCATGGAGACCAAGGCCGTCAGGGGCTACATGGAGGAC TGCAGCGAGACGATGACCAAGTATCGCAAGGACAGGATCGAGTGGCAGAGGCAGCGGAAACAAGCGTGAGTTGTC ACCCTCCCGTCTGTCTTTGATTTCCCGTGGTGTCCTCGATCGGGTCTTTTTCATTCCGCCCTCGCCTCCGACCCC TTGTCCGGGGTTGCTGACAGTCTCTTCCCCAGAATCGAAGATCTTCGGCAGCTCAACGAGGAGCGCAAGTCGCTG ATGCCCGACACGGGGCCGGCGGACGATCTGATCCACAACCTCAAGAAGGAAGACGACCTCAAGATGGCCGACGCA GACGAATCGCAAATCGACAGGGAGGGCGACGCAGAGGGCAGCGGCGACGACGACGACAACAACAACAACAACAAC AACAACAACAACAACAACAACAACAACAACGCCAAGTCGCACAAGAAGCGCCGCGGCCGGGTCCAGTCGGAGAAG CAGCGGAAACGAGAGGAGGAGCGGGAACGAAAGGCGCGAGAGAAGGAAAAGGAGAGGGAGAGGGAGAGGGAAAAG GAAAAGGAGCACAAGGGGTCGGGCAAGCTGCCGCCGCAGCAGATGAAGCAGTACAACAAGATTCTCAAGGAGATC CAAAAAAGGGAGGACGTCATCAAGGTGTGCGAGGGCGAGATCGCCGTCATCGAAAACGACCTGCGCGAGGCCGAC TGCCCGAGGACGCGGGTGATGGGCAAGGACCGGTTCTGGAACCGGTACTACTGGTTCGAGCGCAACGGGATGCCG TACGCGGGGCTGCCCAACAGCTCGACGGCCTTCGCCGAGTACGCCAACGGCTGCATATGGGTGCAGGGGCCGGAC GAGCTCGAGCGGGAGGGCTACATCGACGTGCCGGCGGAGCTGCAGAACGAGTACAAGGCGCGCTTCAACATGACG ATAGCGGAGCGCAAGGCGACGGAGGAGGGCGGGACGAGCGTGTCCAACGCGCAGCAGTGGGGCTACATCTGCGAG CCCGAGGACGTGGACCAGCTGATCCGGTGGCTGGACCCGCGGGGCTTCAACGAGCTGAAGCTGCGCAAGGAGCTG CTCAACTACAAGGACAAGATCGCGGCGCACATGGAGAAGCGGAAGCAGTATCTGGCGGTGCCGGCGGCGGCGGCG GCGGCGGCGGCGGCGGGGTCGGCATCAGAAGCAGGCTCCTCGACGGCGGCGGCGGCGAACGAGAGAGGCAATAAG AAGGACGAGTCGGCGGCGAAGCGGACGAGCTCGCGGATCCGGGACAAGACGCCGGAGCCGCCGAGCTACCGCTGC CTGCGGTGGGAGAACACGATGGCGCTCGAGGAGCTGGGCCACCTGCACGGGGAGCAGCCGCCGCCGCCGCGGCCG AGGAAGCAGACGAAGAAGCGCGAGGCGATGGGGGAGCCGGCGGGCAAGGGGGCGACGAAGAGCCGGCGGCGGTAG |