© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|1163 |
| Gene name | |
| Location | Contig_1246:2629..3942 |
| Strand | - |
| Gene length (bp) | 1313 |
| Transcript length (bp) | 1134 |
| Coding sequence length (bp) | 1134 |
| Protein length (aa) | 378 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13230 | GATase_4 | Glutamine amidotransferases class-II | 1.1E-13 | 38 | 299 |
| PF13522 | GATase_6 | Glutamine amidotransferase domain | 9.2E-07 | 85 | 164 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53871|DUG3_YEAST | Probable glutamine amidotransferase DUG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUG3 PE=1 SV=1 | 1 | 333 | 1.0E-103 |
| sp|P54004|Y199_SYNY3 | Putative glutamine amidotransferase slr0199 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0199 PE=3 SV=1 | 1 | 310 | 3.0E-30 |
| sp|O69670|EGTC_MYCTU | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=egtC PE=1 SV=1 | 1 | 121 | 3.0E-11 |
| sp|A0R5M9|EGTC_MYCS2 | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=egtC PE=1 SV=1 | 1 | 121 | 4.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1163 MCRFLVYKGSDEILLSKLILDPAHSILKQSFDSRLRLDTRRGQNNADGFGIGFYTDPKLGAPPCLFTSTIPAWNC TNLQRIASKTASRLIFGHVRATTEGSLSEDNCHPFTHGSLMWMHNGNLGGWKHIKRRLGDRLADKWYLGVKGGTD SEWAFALFLDTLERLGHSPGACPETGFGPTVLRRAMEQTIAQINELTDSIPQELVQSDDVDTRSLLNFAVTDGHS VICTRYVSSSKDEAASLYYSSGTQWVTRTAEADDRRYQMERKDKGADIVLVASEPLTFERENWVNVPTNSILTIH RQTVMVHPILDKYYERDPCHVRSSAFVQAKGLLSNEKAPSPGHEARQSAFDGCRKPCSGSHSPDLMRRSQTPASL RE* |
| Coding | >Hirsu2|1163 ATGTGCCGCTTTTTGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCG ATCCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGC ATCGGGTTCTATACCGACCCCAAGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGC ACCAACCTGCAGCGGATCGCGTCCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGC TCCCTCAGCGAGGACAACTGCCATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGG TGGAAGCACATCAAGAGGCGGCTCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGAC AGCGAGTGGGCCTTTGCCCTCTTCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACG GGCTTCGGGCCGACGGTGCTGCGCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATC CCGCAGGAGCTGGTGCAGAGCGACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGC GTCATCTGCACGCGATACGTCAGCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGG GTGACGCGGACGGCCGAGGCCGACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTC GTCGCCAGCGAGCCGCTGACGTTTGAGAGGGAAAATTGGGTCAACGTGCCGACAAACTCAATCTTGACGATCCAT CGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGCGAGACCCGTGCCACGTCCGGTCCAGCGCC TTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCCCCGGCCACGAGGCCCGGCAGTCGGCCTTT GACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGATGCGAAGGTCGCAGACGCCGGCCTCGTTG CGAGAGTGA |
| Transcript | >Hirsu2|1163 ATGTGCCGCTTTTTGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCG ATCCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGC ATCGGGTTCTATACCGACCCCAAGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGC ACCAACCTGCAGCGGATCGCGTCCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGC TCCCTCAGCGAGGACAACTGCCATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGG TGGAAGCACATCAAGAGGCGGCTCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGAC AGCGAGTGGGCCTTTGCCCTCTTCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACG GGCTTCGGGCCGACGGTGCTGCGCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATC CCGCAGGAGCTGGTGCAGAGCGACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGC GTCATCTGCACGCGATACGTCAGCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGG GTGACGCGGACGGCCGAGGCCGACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTC GTCGCCAGCGAGCCGCTGACGTTTGAGAGGGAAAATTGGGTCAACGTGCCGACAAACTCAATCTTGACGATCCAT CGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGCGAGACCCGTGCCACGTCCGGTCCAGCGCC TTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCCCCGGCCACGAGGCCCGGCAGTCGGCCTTT GACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGATGCGAAGGTCGCAGACGCCGGCCTCGTTG CGAGAGTGA |
| Gene | >Hirsu2|1163 ATGTGCCGCTTTTTGGTTCGTCGCCTCGTCGCCGCAGCCAACGGCTTCGGTCCGTCGGACGCGCGCTCACCTCGT CCCCTCCGTCTAGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCGAT CCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGTAAGAAGCCGAGCCCCCCTTGTTCTGCCCTCCCCGAGGGG CTGACACCCGACAGGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGCATCGGGTTCTATACCGACCCCA AGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGCACCAACCTGCAGCGGATCGCGT CCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGCTCCCTCAGCGAGGACAACTGCC ATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGGTGGAAGCACATCAAGAGGCGGC TCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGACAGCGAGTGGGCCTTTGCCCTCT TCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACGGGCTTCGGGCCGACGGTGCTGC GCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATCCCGCAGGAGCTGGTGCAGAGCG ACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGCGTCATCTGCACGCGATACGTCA GCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGGGTGACGCGGACGGCCGAGGCCG ACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTCGTCGCCAGCGAGCCGCTGACGT TTGAGAGGGGTGAGTGAGGCGGGCTTGCCAGACGACGGACGGACGGCTGACGCAGGCCAGAAAATTGGGTCAACG TGCCGACAAACTCAATCTTGACGATCCATCGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGC GAGACCCGTGCCACGTCCGGTCCAGCGCCTTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCC CCGGCCACGAGGCCCGGCAGTCGGCCTTTGACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGA TGCGAAGGTCGCAGACGCCGGCCTCGTTGCGAGAGTGA |