Protein ID | Hirsu2|1163 |
Gene name | |
Location | Contig_1246:2629..3942 |
Strand | - |
Gene length (bp) | 1313 |
Transcript length (bp) | 1134 |
Coding sequence length (bp) | 1134 |
Protein length (aa) | 378 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13230 | GATase_4 | Glutamine amidotransferases class-II | 1.1E-13 | 38 | 299 |
PF13522 | GATase_6 | Glutamine amidotransferase domain | 9.2E-07 | 85 | 164 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53871|DUG3_YEAST | Probable glutamine amidotransferase DUG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUG3 PE=1 SV=1 | 1 | 333 | 1.0E-103 |
sp|P54004|Y199_SYNY3 | Putative glutamine amidotransferase slr0199 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0199 PE=3 SV=1 | 1 | 310 | 3.0E-30 |
sp|O69670|EGTC_MYCTU | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=egtC PE=1 SV=1 | 1 | 121 | 3.0E-11 |
sp|A0R5M9|EGTC_MYCS2 | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=egtC PE=1 SV=1 | 1 | 121 | 4.0E-09 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | 0.5324 | 0.58 | 0.1242 | 0.1242 | 0.2152 | 0.0066 | 0.1152 | 0.2323 | 0.3425 | 0.2 |
Orthofinder run ID | 4 |
Orthogroup | 1570 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1163 MCRFLVYKGSDEILLSKLILDPAHSILKQSFDSRLRLDTRRGQNNADGFGIGFYTDPKLGAPPCLFTSTIPAWNC TNLQRIASKTASRLIFGHVRATTEGSLSEDNCHPFTHGSLMWMHNGNLGGWKHIKRRLGDRLADKWYLGVKGGTD SEWAFALFLDTLERLGHSPGACPETGFGPTVLRRAMEQTIAQINELTDSIPQELVQSDDVDTRSLLNFAVTDGHS VICTRYVSSSKDEAASLYYSSGTQWVTRTAEADDRRYQMERKDKGADIVLVASEPLTFERENWVNVPTNSILTIH RQTVMVHPILDKYYERDPCHVRSSAFVQAKGLLSNEKAPSPGHEARQSAFDGCRKPCSGSHSPDLMRRSQTPASL RE* |
Coding | >Hirsu2|1163 ATGTGCCGCTTTTTGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCG ATCCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGC ATCGGGTTCTATACCGACCCCAAGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGC ACCAACCTGCAGCGGATCGCGTCCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGC TCCCTCAGCGAGGACAACTGCCATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGG TGGAAGCACATCAAGAGGCGGCTCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGAC AGCGAGTGGGCCTTTGCCCTCTTCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACG GGCTTCGGGCCGACGGTGCTGCGCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATC CCGCAGGAGCTGGTGCAGAGCGACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGC GTCATCTGCACGCGATACGTCAGCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGG GTGACGCGGACGGCCGAGGCCGACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTC GTCGCCAGCGAGCCGCTGACGTTTGAGAGGGAAAATTGGGTCAACGTGCCGACAAACTCAATCTTGACGATCCAT CGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGCGAGACCCGTGCCACGTCCGGTCCAGCGCC TTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCCCCGGCCACGAGGCCCGGCAGTCGGCCTTT GACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGATGCGAAGGTCGCAGACGCCGGCCTCGTTG CGAGAGTGA |
Transcript | >Hirsu2|1163 ATGTGCCGCTTTTTGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCG ATCCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGC ATCGGGTTCTATACCGACCCCAAGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGC ACCAACCTGCAGCGGATCGCGTCCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGC TCCCTCAGCGAGGACAACTGCCATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGG TGGAAGCACATCAAGAGGCGGCTCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGAC AGCGAGTGGGCCTTTGCCCTCTTCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACG GGCTTCGGGCCGACGGTGCTGCGCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATC CCGCAGGAGCTGGTGCAGAGCGACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGC GTCATCTGCACGCGATACGTCAGCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGG GTGACGCGGACGGCCGAGGCCGACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTC GTCGCCAGCGAGCCGCTGACGTTTGAGAGGGAAAATTGGGTCAACGTGCCGACAAACTCAATCTTGACGATCCAT CGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGCGAGACCCGTGCCACGTCCGGTCCAGCGCC TTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCCCCGGCCACGAGGCCCGGCAGTCGGCCTTT GACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGATGCGAAGGTCGCAGACGCCGGCCTCGTTG CGAGAGTGA |
Gene | >Hirsu2|1163 ATGTGCCGCTTTTTGGTTCGTCGCCTCGTCGCCGCAGCCAACGGCTTCGGTCCGTCGGACGCGCGCTCACCTCGT CCCCTCCGTCTAGGTATACAAGGGCAGCGACGAGATTCTTCTGTCGAAGCTCATCCTCGACCCTGCCCATTCGAT CCTCAAACAATCCTTCGACTCGCGGCTGCGACTCGTAAGAAGCCGAGCCCCCCTTGTTCTGCCCTCCCCGAGGGG CTGACACCCGACAGGACACGCGGCGAGGGCAGAACAATGCCGACGGCTTCGGCATCGGGTTCTATACCGACCCCA AGCTCGGGGCGCCGCCCTGCCTCTTCACGTCGACCATCCCGGCCTGGAACTGCACCAACCTGCAGCGGATCGCGT CCAAGACGGCGTCGCGGCTGATATTCGGGCACGTGCGCGCCACGACCGAAGGCTCCCTCAGCGAGGACAACTGCC ATCCCTTCACGCACGGCAGCCTCATGTGGATGCACAACGGCAACCTCGGGGGGTGGAAGCACATCAAGAGGCGGC TCGGCGACCGGCTGGCCGACAAGTGGTACCTGGGCGTCAAGGGCGGGACGGACAGCGAGTGGGCCTTTGCCCTCT TCCTCGACACGCTCGAGCGGCTGGGCCACAGCCCCGGCGCCTGCCCGGAGACGGGCTTCGGGCCGACGGTGCTGC GCAGGGCCATGGAGCAGACGATTGCGCAGATCAACGAGCTGACCGACTCGATCCCGCAGGAGCTGGTGCAGAGCG ACGACGTCGACACCAGGAGCCTGCTCAACTTCGCCGTCACCGACGGCCACAGCGTCATCTGCACGCGATACGTCA GCAGCTCCAAGGACGAGGCCGCCAGCCTGTACTACTCGTCCGGCACGCAGTGGGTGACGCGGACGGCCGAGGCCG ACGACCGGCGCTACCAGATGGAGCGCAAGGACAAGGGCGCCGACATCGTCCTCGTCGCCAGCGAGCCGCTGACGT TTGAGAGGGGTGAGTGAGGCGGGCTTGCCAGACGACGGACGGACGGCTGACGCAGGCCAGAAAATTGGGTCAACG TGCCGACAAACTCAATCTTGACGATCCATCGACAGACGGTCATGGTGCACCCGATCCTCGACAAGTACTACGAGC GAGACCCGTGCCACGTCCGGTCCAGCGCCTTTGTCCAGGCCAAGGGCCTGCTGTCGAACGAGAAGGCGCCGAGCC CCGGCCACGAGGCCCGGCAGTCGGCCTTTGACGGCTGCAGGAAGCCCTGCTCCGGGAGTCACAGCCCGGACCTGA TGCGAAGGTCGCAGACGCCGGCCTCGTTGCGAGAGTGA |