Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1161
Gene name
LocationContig_1245:6792..7840
Strand-
Gene length (bp)1048
Transcript length (bp)774
Coding sequence length (bp)774
Protein length (aa) 258

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09347 DUF1989 Domain of unknown function (DUF1989) 1.5E-57 17 191

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10082|YAO3_SCHPO Uncharacterized protein C11D3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.03c PE=4 SV=1 1 257 4.0E-83
sp|O31473|YCGI_BACSU Uncharacterized protein YcgI OS=Bacillus subtilis (strain 168) GN=ycgI PE=4 SV=4 16 198 1.0E-13

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6582 0.4347 0.0718 0.0798 0.1996 0.0217 0.2086 0.2638 0.1481 0.0565

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6518
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5133
Ophiocordyceps australis map64 (Brazil) OphauB2|1532
Ophiocordyceps subramaniannii Hirsu2|1161 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1161
MYEAIRRAARERVDDFTLAPRDGRAWAVAAGAVVRISTPEGPQVGDLNLWNRHNRHERFWASKTRQLQSSHLSRL
DRLWSTAPFLRPLATVLADSLAWYGRDGNGARVHDLLGSRCDPYAGLLAGAGGYDFHCHSNLVRAVRPFGLAEHD
VHDVVNLFQVTGLDDRGRYFMSPSPARAGDAVELLAEQDLLMALSTCPGGDLSAWALDSPAAMASTCRPLRVQVF
RLADDGLLARLGWRPACVSAYAGRHGIVEPDA*
Coding >Hirsu2|1161
ATGTACGAGGCGATCCGGCGGGCGGCGCGCGAGCGGGTCGACGACTTCACGCTGGCGCCGCGGGATGGGCGGGCG
TGGGCGGTGGCGGCCGGGGCGGTGGTGCGGATCAGCACGCCTGAAGGGCCGCAGGTCGGCGACCTCAACCTCTGG
AACCGGCACAACCGGCACGAGCGCTTCTGGGCCAGCAAGACGCGCCAGCTGCAGTCCTCCCACCTCTCGCGGCTG
GACCGGCTGTGGTCGACGGCGCCGTTCCTGCGCCCGCTGGCGACGGTCCTGGCCGACAGCCTGGCCTGGTACGGG
CGCGACGGCAACGGCGCGCGCGTCCACGACCTGCTCGGCTCGCGCTGCGACCCCTACGCCGGCCTGCTGGCCGGC
GCCGGCGGCTACGACTTCCACTGCCACTCCAACCTCGTGCGCGCCGTCCGGCCCTTCGGCCTCGCCGAGCACGAC
GTCCACGATGTCGTCAACCTGTTCCAGGTCACGGGGCTGGATGACCGGGGCCGCTACTTCATGAGCCCGAGTCCG
GCCCGGGCGGGCGATGCGGTGGAGTTGTTGGCTGAGCAGGACTTGCTCATGGCCCTGAGCACCTGTCCCGGCGGC
GACCTCTCCGCCTGGGCCCTCGACTCGCCCGCCGCCATGGCCTCTACCTGCCGCCCGCTGCGCGTCCAGGTCTTC
CGGCTGGCTGATGACGGCCTGCTGGCCCGGCTTGGCTGGCGGCCCGCCTGCGTCTCCGCCTACGCCGGCCGGCAC
GGCATCGTCGAGCCCGACGCCTAG
Transcript >Hirsu2|1161
ATGTACGAGGCGATCCGGCGGGCGGCGCGCGAGCGGGTCGACGACTTCACGCTGGCGCCGCGGGATGGGCGGGCG
TGGGCGGTGGCGGCCGGGGCGGTGGTGCGGATCAGCACGCCTGAAGGGCCGCAGGTCGGCGACCTCAACCTCTGG
AACCGGCACAACCGGCACGAGCGCTTCTGGGCCAGCAAGACGCGCCAGCTGCAGTCCTCCCACCTCTCGCGGCTG
GACCGGCTGTGGTCGACGGCGCCGTTCCTGCGCCCGCTGGCGACGGTCCTGGCCGACAGCCTGGCCTGGTACGGG
CGCGACGGCAACGGCGCGCGCGTCCACGACCTGCTCGGCTCGCGCTGCGACCCCTACGCCGGCCTGCTGGCCGGC
GCCGGCGGCTACGACTTCCACTGCCACTCCAACCTCGTGCGCGCCGTCCGGCCCTTCGGCCTCGCCGAGCACGAC
GTCCACGATGTCGTCAACCTGTTCCAGGTCACGGGGCTGGATGACCGGGGCCGCTACTTCATGAGCCCGAGTCCG
GCCCGGGCGGGCGATGCGGTGGAGTTGTTGGCTGAGCAGGACTTGCTCATGGCCCTGAGCACCTGTCCCGGCGGC
GACCTCTCCGCCTGGGCCCTCGACTCGCCCGCCGCCATGGCCTCTACCTGCCGCCCGCTGCGCGTCCAGGTCTTC
CGGCTGGCTGATGACGGCCTGCTGGCCCGGCTTGGCTGGCGGCCCGCCTGCGTCTCCGCCTACGCCGGCCGGCAC
GGCATCGTCGAGCCCGACGCCTAG
Gene >Hirsu2|1161
ATGTACGAGGCGATCCGGCGGGCGGCGCGCGAGCGGGTCGACGACTTCACGCTGGCGCCGCGGGATGGGCGGGCG
TGGGCGGTGGCGGCCGGGGCGGTGGTGCGGATCAGCACGCCTGAAGGGCCGCAGGTCGGTGCGTCCTCTCGCTCT
CTCTTCCTCCCTTCTCTGCTCCAGTCTCCATTGACGACTCCCTGACGGTATCCCCTCGGCTGACGGCTCAAAAAA
AACAGGCGACCTCAACCTCTGGAACCGGCACAACCGGCACGAGCGCTTCTGGGCCAGCAAGACGCGCCAGCTGCA
GTCCTCCCACCTCTCGCGGCTGGACCGGCTGTGGTCGACGGCGCCGTTCCTGCGCCCGCTGGCGACGGTCCTGGC
CGACAGCCTGGCCTGGTACGGGCGCGACGGCAACGGCGCGCGCGTCCACGACCTGCTCGGCTCGCGCTGCGACCC
CTACGCCGGCCTGCTGGCCGGCGCCGGCGGCTACGACTTCCACTGCCACTCCAACCTCGTGCGCGCCGTCCGGCC
CTTCGGCCTCGCCGAGCACGACGTCCACGATGTCGTCAACCTGTTCCAGGTCACGGGGCTGGATGACCGGGGCCG
CTACTTCATGAGCCCGAGTCCGGCCCGGGCGGGCGATGCGGTGGAGTTGTTGGCTGAGCAGGACTTGCTCATGGC
CCTGAGTACGTTTCTCTGTCTCTTCGTCTTGGTCTTCGTCTTGGTCACCCCCCTCCCCCCCGTGCGGTNNNNNNN
NNNNNNNNNNNNNNNNGAGAGAGAGAGACGGAGAGACAGGAGAGATGGAGAGGAGAGGAGAGAGAGAGACGGAGA
GACAGACGGCGCTGACGCCGGATACCCCCAAGGCACCTGTCCCGGCGGCGACCTCTCCGCCTGGGCCCTCGACTC
GCCCGCCGCCATGGCCTCTACCTGCCGCCCGCTGCGCGTCCAGGTCTTCCGGCTGGCTGATGACGGCCTGCTGGC
CCGGCTTGGCTGGCGGCCCGCCTGCGTCTCCGCCTACGCCGGCCGGCACGGCATCGTCGAGCCCGACGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail