Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1158
Gene name
LocationContig_1245:1581..2470
Strand-
Gene length (bp)889
Transcript length (bp)777
Coding sequence length (bp)777
Protein length (aa) 259

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P42839|VNX1_YEAST Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 90 258 5.0E-10
sp|Q9P7B3|YI14_SCHPO Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 212 248 1.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2671 0.8431 0.2109 0.038 0.1438 0.0178 0.0314 0.0301 0.0309 0.0582

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup691
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5131
Ophiocordyceps australis map64 (Brazil) OphauB2|1530
Ophiocordyceps camponoti-floridani Ophcf2|03691
Ophiocordyceps camponoti-rufipedis Ophun1|2359
Ophiocordyceps kimflemingae Ophio5|3179
Ophiocordyceps subramaniannii Hirsu2|1158 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2848

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1158
MDRDGSSARRRPTQSPRTTSPTGSRNPALRVELADDASEGVQSPETVRRRTEGNGYGSIQSSNTAAAGSSRSPVE
PSQDRSSQQRGPSQSSRPGTSGPDRVKSFSRQRKPPLSRRISSNTPHRGEIFSADDDTHEVEADAVHRQRDAPSA
YSTRRRQQQPSSSSRLPSYRAGADEDAEPDTRGVPPTTAEEDEDDASQDQDDESPLDEAADGDSDSNISDAESFT
LKDRQQAINQTHPFGIRVWKPALPTSTRRREAT*
Coding >Hirsu2|1158
ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG
AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG
ACCGAAGGCAACGGATATGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG
CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC
GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG
ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC
TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA
GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG
GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC
CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGCCGACA
TCCACTCGACGCCGGGAGGCCACGTGA
Transcript >Hirsu2|1158
ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG
AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG
ACCGAAGGCAACGGATATGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG
CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC
GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG
ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC
TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA
GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG
GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC
CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGCCGACA
TCCACTCGACGCCGGGAGGCCACGTGA
Gene >Hirsu2|1158
ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG
AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG
ACCGAAGGCAACGGATATGGTGAGCTGCTGCTGGCCCTTTTGCTTTGCCCATGGCTCTTCCTGCTGACGCGGCTG
CCCATCCCCCTGCACCCAGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG
CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC
GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG
ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC
TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA
GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG
GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC
CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGTACAAG
AAGGACCGCTCCATCCAGAAGACGGCCCAGGCCGACATCCACTCGACGCCGGGAGGCCACGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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