Protein ID | Hirsu2|1158 |
Gene name | |
Location | Contig_1245:1581..2470 |
Strand | - |
Gene length (bp) | 889 |
Transcript length (bp) | 777 |
Coding sequence length (bp) | 777 |
Protein length (aa) | 259 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P42839|VNX1_YEAST | Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 | 90 | 258 | 5.0E-10 |
sp|Q9P7B3|YI14_SCHPO | Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 | 212 | 248 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.2671 | 0.8431 | 0.2109 | 0.038 | 0.1438 | 0.0178 | 0.0314 | 0.0301 | 0.0309 | 0.0582 |
Orthofinder run ID | 4 |
Orthogroup | 691 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1158 MDRDGSSARRRPTQSPRTTSPTGSRNPALRVELADDASEGVQSPETVRRRTEGNGYGSIQSSNTAAAGSSRSPVE PSQDRSSQQRGPSQSSRPGTSGPDRVKSFSRQRKPPLSRRISSNTPHRGEIFSADDDTHEVEADAVHRQRDAPSA YSTRRRQQQPSSSSRLPSYRAGADEDAEPDTRGVPPTTAEEDEDDASQDQDDESPLDEAADGDSDSNISDAESFT LKDRQQAINQTHPFGIRVWKPALPTSTRRREAT* |
Coding | >Hirsu2|1158 ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG ACCGAAGGCAACGGATATGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGCCGACA TCCACTCGACGCCGGGAGGCCACGTGA |
Transcript | >Hirsu2|1158 ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG ACCGAAGGCAACGGATATGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGCCGACA TCCACTCGACGCCGGGAGGCCACGTGA |
Gene | >Hirsu2|1158 ATGGATCGCGACGGCTCATCCGCGCGCCGACGCCCAACCCAGTCGCCCCGTACAACGTCGCCTACCGGCTCCCGG AATCCCGCCTTGAGGGTTGAGCTGGCCGACGACGCGTCCGAAGGCGTCCAGTCCCCCGAAACCGTGCGCCGCCGG ACCGAAGGCAACGGATATGGTGAGCTGCTGCTGGCCCTTTTGCTTTGCCCATGGCTCTTCCTGCTGACGCGGCTG CCCATCCCCCTGCACCCAGGATCGATACAGTCTTCGAACACGGCCGCCGCCGGCAGCAGCCGTAGCCCCGTCGAG CCCTCGCAAGACCGCTCTTCCCAGCAGCGAGGCCCGTCGCAGTCGTCCCGCCCCGGCACCTCGGGGCCCGACCGC GTCAAATCCTTCTCTCGCCAGCGGAAGCCGCCGCTCTCGCGCCGCATATCCTCCAACACGCCTCACCGCGGCGAG ATCTTCTCCGCCGACGACGACACCCACGAGGTCGAGGCCGACGCCGTCCACCGCCAGCGCGACGCGCCCTCCGCC TACAGCACGAGGCGCCGCCAGCAGCAGCCGTCGAGCTCGTCTCGCCTGCCCTCGTACCGCGCCGGCGCCGACGAA GACGCCGAGCCCGACACCCGCGGCGTGCCGCCCACGACGGCCGAGGAGGACGAGGACGACGCGAGCCAGGACCAG GACGACGAGTCCCCGCTCGACGAGGCGGCCGACGGCGACTCCGACAGCAACATAAGCGACGCCGAAAGCTTCACC CTCAAGGACCGCCAGCAGGCCATCAACCAGACCCACCCCTTCGGCATCCGCGTCTGGAAGCCGGCCCTGTACAAG AAGGACCGCTCCATCCAGAAGACGGCCCAGGCCGACATCCACTCGACGCCGGGAGGCCACGTGA |