Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1153
Gene name
LocationContig_1243:47..1376
Strand+
Gene length (bp)1329
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5671 0.5924 0.4827 0.066 0.2632 0.0662 0.1313 0.1741 0.2009 0.1946

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup8731
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|1153 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1153
MSGMSSEKPALDLLRCHPPPDHENDVVWPGQEPRPSIRQWADDSLDQAFKLAAPARSRELTVDHDGHRLPHVVSP
VTCWRHTSVDTRGVIGRRRPPARLYFRSLKISRQAKMPHFCVSPEPLLQRVRDTAKLRICSDLRCPQQWHPPSVE
LPSSALRPPSSLSHSPLLYLFPSESTCPHYQPGISGAREGKLGDIDHQMAEEGFTGQTTD*
Coding >Hirsu2|1153
ATGAGCGGGATGTCGAGCGAGAAGCCGGCGCTCGACTTGTTGCGCTGCCACCCACCGCCCGATCACGAAAACGAC
GTCGTCTGGCCTGGCCAGGAGCCCCGTCCCAGCATCCGTCAATGGGCGGACGATTCCTTGGATCAGGCTTTCAAG
CTCGCCGCTCCTGCGCGTAGCCGCGAATTGACCGTCGATCACGATGGCCATCGCCTGCCTCACGTCGTCAGTCCG
GTCACGTGCTGGCGCCACACCTCTGTGGACACACGAGGCGTCATCGGCCGACGTCGACCGCCTGCCCGGCTCTAC
TTCCGGTCGCTGAAAATCTCTCGTCAGGCCAAGATGCCTCATTTTTGCGTCTCGCCTGAGCCACTGCTGCAGCGT
GTCCGCGATACTGCGAAATTGCGCATCTGCTCTGACCTTCGCTGCCCACAGCAGTGGCACCCGCCCTCCGTCGAA
TTGCCGTCGTCTGCTCTGCGCCCCCCCAGCTCCCTGAGCCACAGTCCTCTTCTGTATCTGTTTCCGAGCGAATCT
ACATGTCCTCATTATCAACCCGGAATTTCGGGGGCCCGGGAGGGGAAGCTGGGCGACATCGACCATCAGATGGCG
GAAGAAGGCTTCACCGGCCAAACGACGGACTAA
Transcript >Hirsu2|1153
ATGAGCGGGATGTCGAGCGAGAAGCCGGCGCTCGACTTGTTGCGCTGCCACCCACCGCCCGATCACGAAAACGAC
GTCGTCTGGCCTGGCCAGGAGCCCCGTCCCAGCATCCGTCAATGGGCGGACGATTCCTTGGATCAGGCTTTCAAG
CTCGCCGCTCCTGCGCGTAGCCGCGAATTGACCGTCGATCACGATGGCCATCGCCTGCCTCACGTCGTCAGTCCG
GTCACGTGCTGGCGCCACACCTCTGTGGACACACGAGGCGTCATCGGCCGACGTCGACCGCCTGCCCGGCTCTAC
TTCCGGTCGCTGAAAATCTCTCGTCAGGCCAAGATGCCTCATTTTTGCGTCTCGCCTGAGCCACTGCTGCAGCGT
GTCCGCGATACTGCGAAATTGCGCATCTGCTCTGACCTTCGCTGCCCACAGCAGTGGCACCCGCCCTCCGTCGAA
TTGCCGTCGTCTGCTCTGCGCCCCCCCAGCTCCCTGAGCCACAGTCCTCTTCTGTATCTGTTTCCGAGCGAATCT
ACATGTCCTCATTATCAACCCGGAATTTCGGGGGCCCGGGAGGGGAAGCTGGGCGACATCGACCATCAGATGGCG
GAAGAAGGCTTCACCGGCCAAACGACGGACTAA
Gene >Hirsu2|1153
ATGAGCGGGATGTCGAGCGAGAAGCCGGCGCTCGACTTGTTGCGGTGCATCGACAGCGCCTGGTCGCCATAGGAG
AGGATGGGCGACAGGACGATGAAGACAGGGGCCAGGTGGCCGGCAAAGGCCGCAAGCCAGCCGCTCATGGCGTCG
CGTCGGTCCCTCGTCTTCTGCCTCTTCTGCCTCTTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGAGAGGAGGAGGAGGACAAGGCAGATGCAAAGGTTAATTGGAGGCGGCCCGGT
CGAAGCATCGGGCAAGCCACAGGACAAAGATTAAAAGACCAAAGTCAATTCGGCGGCGCCCTACGCGATCGGAAG
CGGCTTGGACGGGCGCGTCTGCGACAGGCGAACAGAGGGAGGCGAGACATTGCTTGTATGGACCCAACCACGACT
CCTCTCCCCATCGCACCTATTTTTCTGCCGTCTATTTTCGTCCTCCGCCGGAGCGGTATCCTAGTACACTCTACG
CCTACTCCGGCGCCCTAGACCTTGACAAGTCCGCCCTGTACCTGTTTTTGTGTGGGCCTTAGCGGCCGCTAGCTG
AGTATATTTTGACTCAAAGCGGGTACTCTGGGCGTACTCTTCCGTACCCGCTACTCGATCCTCAGCTGCCACCCA
CCGCCCGATCACGAAAACGACGTCGTCTGGCCTGGCCAGGAGCCCCGTCCCAGCATCCGTCAATGGGCGGACGAT
TCCTTGGATCAGGCTTTCAAGCTCGCCGCTCCTGCGCGTAGCCGCGAATTGACCGTCGATCACGATGGCCATCGC
CTGCCTCACGTCGTCAGTCCGGTCACGTGCTGGCGCCACACCTCTGTGGACACACGAGGCGTCATCGGCCGACGT
CGACCGCCTGCCCGGCTCTACTTCCGGTCGCTGAAAATCTCTCGTCAGGCCAAGATGCCTCATTTTTGCGTCTCG
CCTGAGCCACTGCTGCAGCGTGTCCGCGATACTGCGAAATTGCGCATCTGCTCTGACCTTCGCTGCCCACAGCAG
TGGCACCCGCCCTCCGTCGAATTGCCGTCGTCTGCTCTGCGCCCCCCCAGCTCCCTGAGCCACAGTCCTCTTCTG
TATCTGTTTCCGAGCGAATCTACATGTCCTCATTATCAACCCGGAATTTCGGGGGCCCGGGAGGGGAAGCTGGGC
GACATCGACCATCAGATGGCGGAAGAAGGCTTCACCGGCCAAACGACGGACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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