© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1150 |
| Gene name | |
| Location | Contig_1242:2202..2741 |
| Strand | - |
| Gene length (bp) | 539 |
| Transcript length (bp) | 414 |
| Coding sequence length (bp) | 414 |
| Protein length (aa) | 138 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6767 | 0.4158 | 0.2162 | 0.2123 | 0.2448 | 0.054 | 0.0522 | 0.0824 | 0.1269 | 0.0047 |
| Orthofinder run ID | 4 |
| Orthogroup | 6517 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1150 MRANAEHAASTGDAEGVESALMRVANMREERAKSLQENHIRYHTALAEARAKAMARHRADHRHYLKIRAGFIEKL AKGAQQRKLIEARMNAAIQRMYLEMTKTEDMMITGYEGREADAKAAADDQSGDAAMGPEGEA* |
| Coding | >Hirsu2|1150 ATGAGAGCCAACGCGGAGCACGCAGCCTCGACCGGTGATGCTGAAGGCGTGGAATCCGCGTTGATGCGTGTTGCC AACATGAGGGAGGAACGCGCCAAGAGCCTGCAAGAAAACCACATCCGATACCACACGGCTCTGGCGGAGGCGCGA GCGAAGGCCATGGCTCGTCACAGAGCGGATCACAGGCATTACCTGAAAATCCGCGCCGGCTTCATCGAGAAACTG GCCAAGGGTGCACAGCAGCGCAAGCTCATCGAGGCCAGAATGAACGCGGCGATCCAGCGGATGTACCTGGAAATG ACAAAGACGGAGGACATGATGATAACGGGCTACGAGGGGAGAGAGGCGGATGCCAAGGCAGCGGCAGACGACCAG AGCGGCGACGCTGCGATGGGACCAGAGGGAGAAGCGTGA |
| Transcript | >Hirsu2|1150 ATGAGAGCCAACGCGGAGCACGCAGCCTCGACCGGTGATGCTGAAGGCGTGGAATCCGCGTTGATGCGTGTTGCC AACATGAGGGAGGAACGCGCCAAGAGCCTGCAAGAAAACCACATCCGATACCACACGGCTCTGGCGGAGGCGCGA GCGAAGGCCATGGCTCGTCACAGAGCGGATCACAGGCATTACCTGAAAATCCGCGCCGGCTTCATCGAGAAACTG GCCAAGGGTGCACAGCAGCGCAAGCTCATCGAGGCCAGAATGAACGCGGCGATCCAGCGGATGTACCTGGAAATG ACAAAGACGGAGGACATGATGATAACGGGCTACGAGGGGAGAGAGGCGGATGCCAAGGCAGCGGCAGACGACCAG AGCGGCGACGCTGCGATGGGACCAGAGGGAGAAGCGTGA |
| Gene | >Hirsu2|1150 ATGAGAGCCAACGCGGAGCACGCAGCCTCGACCGGTGATGCTGAAGGCGTGGAATCCGCGTTGATGCGTGTTGCC AACGTGAGTCCCCCTCACGAACCGGAGCATGCTGCGTGACTGACCGGCCTTGATTAGATGAGGGAGGAACGCGCC AAGAGCCTGCAAGAAAACCACATCCGATACCACACGGCTCTGGCGGAGGCGCGAGCGAAGGCCATGGCTCGTCAC AGAGCGGATCACAGGCATTAGTATCATCTTTCCTGGGGCTAACGCCCAACTCCAATACCATGGGAGCAACAGCTG ACCAGACGGCCTCCAGCCTGAAAATCCGCGCCGGCTTCATCGAGAAACTGGCCAAGGGTGCACAGCAGCGCAAGC TCATCGAGGCCAGAATGAACGCGGCGATCCAGCGGATGTACCTGGAAATGACAAAGACGGAGGACATGATGATAA CGGGCTACGAGGGGAGAGAGGCGGATGCCAAGGCAGCGGCAGACGACCAGAGCGGCGACGCTGCGATGGGACCAG AGGGAGAAGCGTGA |