© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|115 |
| Gene name | |
| Location | Contig_1017:2000..3367 |
| Strand | - |
| Gene length (bp) | 1367 |
| Transcript length (bp) | 1314 |
| Coding sequence length (bp) | 1314 |
| Protein length (aa) | 438 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07993 | NAD_binding_4 | Male sterility protein | 1.4E-28 | 21 | 301 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q96K12|FACR2_HUMAN | Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | 9 | 330 | 2.0E-15 |
| sp|Q0P5J1|FACR2_BOVIN | Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | 9 | 330 | 4.0E-14 |
| sp|Q66H50|FACR1_RAT | Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | 9 | 304 | 3.0E-13 |
| sp|Q922J9|FACR1_MOUSE | Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | 9 | 304 | 5.0E-13 |
| sp|Q5R834|FACR1_PONAB | Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | 9 | 304 | 8.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q96K12|FACR2_HUMAN | Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | 9 | 330 | 2.0E-15 |
| sp|Q0P5J1|FACR2_BOVIN | Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | 9 | 330 | 4.0E-14 |
| sp|Q66H50|FACR1_RAT | Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | 9 | 304 | 3.0E-13 |
| sp|Q922J9|FACR1_MOUSE | Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | 9 | 304 | 5.0E-13 |
| sp|Q5R834|FACR1_PONAB | Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | 9 | 304 | 8.0E-13 |
| sp|Q8WVX9|FACR1_HUMAN | Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | 9 | 304 | 8.0E-13 |
| sp|Q7TNT2|FACR2_MOUSE | Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | 9 | 330 | 2.0E-12 |
| sp|Q7ZXF5|FACR1_XENLA | Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | 9 | 304 | 2.0E-10 |
| sp|A1ZAI5|FACR1_DROME | Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | 9 | 304 | 4.0E-10 |
| sp|Q5ZM72|FACR1_CHICK | Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | 9 | 304 | 4.0E-10 |
| sp|A1ZAI3|FACR2_DROME | Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster GN=CG8303 PE=2 SV=2 | 9 | 165 | 4.0E-08 |
| sp|Q960W6|FACR3_DROME | Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1 | 9 | 304 | 9.0E-08 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Peroxisomal targeting signal | 0.4351 | 0.2089 | 0.1364 | 0.1975 | 0.4498 | 0.28 | 0.1262 | 0.2185 | 0.2389 | 0.2993 |
| Orthofinder run ID | 4 |
| Orthogroup | 1566 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|115 MAEAEVDRVKQFYKDRTLFMTGASGMVGTVLLAKLVLDTEVKKIYALVRGGEWRLWSGLRSSLPPILVAALQNLN KIVALDGDIERAGCGIGEENWQKVRTETTVFIHLASSTRQDMPLPVAAQEIVFPSLAVADMAFDCPNLSRFVYVS SAYQCSFFERTDKGLTGFDKSVPENIDPKARGGRDLDAVLDELRTPGPMSYEHGEFATTYAHVKFVTEWALSEAF RGRGVEDKLMIHRPAVLGAAERFPYPLFEKAGSTPNVTIAAMLAMSPEQEILAPRMAPDPSEYSLNEMPVDIAVN HLLAHLALGTTGCVHAVASPRQEHRTTRSMPQWSRLFRAPAAGQVRIRWCDDHWTSPRVSIAFRLFPIVSCVFNF EDNKSEQLWRGMNGRERLAWPLRATIDVTSDSYWLGRKTMVEQVVRILQAHANSNPSPWISA* |
| Coding | >Hirsu2|115 ATGGCAGAGGCAGAAGTCGACAGAGTCAAGCAGTTCTACAAAGACCGGACGCTTTTCATGACGGGGGCAAGTGGC ATGGTCGGAACGGTCCTGTTGGCCAAGCTGGTCCTGGACACGGAGGTGAAGAAGATATATGCCTTGGTAAGGGGA GGAGAGTGGCGGCTGTGGAGCGGTCTGCGATCGAGCTTGCCGCCCATCCTCGTCGCAGCCTTGCAAAACCTCAAC AAGATTGTCGCTCTCGACGGGGATATCGAGAGGGCGGGGTGCGGGATCGGAGAGGAGAACTGGCAGAAGGTGCGG ACCGAGACGACGGTATTCATTCACTTAGCCTCGTCCACACGACAAGATATGCCCCTGCCGGTGGCCGCGCAGGAA ATCGTCTTCCCGTCCCTCGCGGTCGCGGACATGGCATTCGACTGCCCCAACCTCTCTCGCTTTGTTTACGTCTCG TCCGCCTATCAGTGCTCCTTCTTTGAGAGGACGGACAAGGGCTTGACCGGCTTCGACAAAAGTGTGCCCGAGAAC ATTGACCCGAAAGCCAGAGGCGGCAGGGATCTCGATGCCGTGCTTGACGAGCTTCGCACACCGGGACCGATGTCC TACGAACACGGGGAATTCGCGACCACATATGCGCACGTCAAGTTCGTCACGGAGTGGGCTCTTTCAGAGGCCTTT CGCGGTCGGGGCGTGGAAGACAAGCTCATGATCCATCGGCCAGCGGTCCTCGGCGCAGCTGAACGCTTCCCGTAT CCGCTGTTCGAAAAGGCGGGATCGACGCCGAACGTCACAATTGCGGCCATGTTGGCGATGAGTCCCGAACAGGAG ATTCTCGCTCCTCGGATGGCGCCGGATCCGTCAGAGTATTCCCTCAACGAGATGCCGGTCGACATCGCCGTCAAC CATCTCCTGGCCCATCTCGCGCTCGGGACGACCGGCTGCGTCCATGCCGTCGCCTCGCCCCGACAGGAACACAGG ACGACGCGTTCGATGCCGCAGTGGAGCAGGCTCTTCCGCGCGCCGGCCGCGGGGCAGGTCCGTATCCGCTGGTGC GACGACCACTGGACCTCGCCGCGAGTTTCCATCGCCTTCCGACTCTTCCCCATAGTCAGCTGCGTGTTCAATTTC GAGGACAACAAGTCGGAGCAGCTATGGCGGGGGATGAACGGGCGCGAGCGGCTCGCGTGGCCTCTGCGGGCGACC ATCGACGTCACGAGCGACAGCTACTGGCTGGGCAGGAAGACGATGGTGGAACAGGTAGTTCGAATACTGCAAGCC CACGCGAACAGCAATCCGTCCCCATGGATATCTGCCTAG |
| Transcript | >Hirsu2|115 ATGGCAGAGGCAGAAGTCGACAGAGTCAAGCAGTTCTACAAAGACCGGACGCTTTTCATGACGGGGGCAAGTGGC ATGGTCGGAACGGTCCTGTTGGCCAAGCTGGTCCTGGACACGGAGGTGAAGAAGATATATGCCTTGGTAAGGGGA GGAGAGTGGCGGCTGTGGAGCGGTCTGCGATCGAGCTTGCCGCCCATCCTCGTCGCAGCCTTGCAAAACCTCAAC AAGATTGTCGCTCTCGACGGGGATATCGAGAGGGCGGGGTGCGGGATCGGAGAGGAGAACTGGCAGAAGGTGCGG ACCGAGACGACGGTATTCATTCACTTAGCCTCGTCCACACGACAAGATATGCCCCTGCCGGTGGCCGCGCAGGAA ATCGTCTTCCCGTCCCTCGCGGTCGCGGACATGGCATTCGACTGCCCCAACCTCTCTCGCTTTGTTTACGTCTCG TCCGCCTATCAGTGCTCCTTCTTTGAGAGGACGGACAAGGGCTTGACCGGCTTCGACAAAAGTGTGCCCGAGAAC ATTGACCCGAAAGCCAGAGGCGGCAGGGATCTCGATGCCGTGCTTGACGAGCTTCGCACACCGGGACCGATGTCC TACGAACACGGGGAATTCGCGACCACATATGCGCACGTCAAGTTCGTCACGGAGTGGGCTCTTTCAGAGGCCTTT CGCGGTCGGGGCGTGGAAGACAAGCTCATGATCCATCGGCCAGCGGTCCTCGGCGCAGCTGAACGCTTCCCGTAT CCGCTGTTCGAAAAGGCGGGATCGACGCCGAACGTCACAATTGCGGCCATGTTGGCGATGAGTCCCGAACAGGAG ATTCTCGCTCCTCGGATGGCGCCGGATCCGTCAGAGTATTCCCTCAACGAGATGCCGGTCGACATCGCCGTCAAC CATCTCCTGGCCCATCTCGCGCTCGGGACGACCGGCTGCGTCCATGCCGTCGCCTCGCCCCGACAGGAACACAGG ACGACGCGTTCGATGCCGCAGTGGAGCAGGCTCTTCCGCGCGCCGGCCGCGGGGCAGGTCCGTATCCGCTGGTGC GACGACCACTGGACCTCGCCGCGAGTTTCCATCGCCTTCCGACTCTTCCCCATAGTCAGCTGCGTGTTCAATTTC GAGGACAACAAGTCGGAGCAGCTATGGCGGGGGATGAACGGGCGCGAGCGGCTCGCGTGGCCTCTGCGGGCGACC ATCGACGTCACGAGCGACAGCTACTGGCTGGGCAGGAAGACGATGGTGGAACAGGTAGTTCGAATACTGCAAGCC CACGCGAACAGCAATCCGTCCCCATGGATATCTGCCTAG |
| Gene | >Hirsu2|115 ATGGCAGAGGCAGAAGTCGACAGAGTCAAGCAGTTCTACAAAGACCGGACGCTTTTCATGACGGGGGCAAGTGGC ATGGTCGGAACGGTCCTGTTGGCCAAGCTGGTCCTGGACACGGAGGTGAAGAAGATATATGCCTTGGTAAGGGGA GGAGAGTGGTATGTCTCGCACCAGACTCACCGAGCTTCCCAGCCATACTCACGCAGGATAGGCGGCTGTGGAGCG GTCTGCGATCGAGCTTGCCGCCCATCCTCGTCGCAGCCTTGCAAAACCTCAACAAGATTGTCGCTCTCGACGGGG ATATCGAGAGGGCGGGGTGCGGGATCGGAGAGGAGAACTGGCAGAAGGTGCGGACCGAGACGACGGTATTCATTC ACTTAGCCTCGTCCACACGACAAGATATGCCCCTGCCGGTGGCCGCGCAGGAAATCGTCTTCCCGTCCCTCGCGG TCGCGGACATGGCATTCGACTGCCCCAACCTCTCTCGCTTTGTTTACGTCTCGTCCGCCTATCAGTGCTCCTTCT TTGAGAGGACGGACAAGGGCTTGACCGGCTTCGACAAAAGTGTGCCCGAGAACATTGACCCGAAAGCCAGAGGCG GCAGGGATCTCGATGCCGTGCTTGACGAGCTTCGCACACCGGGACCGATGTCCTACGAACACGGGGAATTCGCGA CCACATATGCGCACGTCAAGTTCGTCACGGAGTGGGCTCTTTCAGAGGCCTTTCGCGGTCGGGGCGTGGAAGACA AGCTCATGATCCATCGGCCAGCGGTCCTCGGCGCAGCTGAACGCTTCCCGTATCCGCTGTTCGAAAAGGCGGGAT CGACGCCGAACGTCACAATTGCGGCCATGTTGGCGATGAGTCCCGAACAGGAGATTCTCGCTCCTCGGATGGCGC CGGATCCGTCAGAGTATTCCCTCAACGAGATGCCGGTCGACATCGCCGTCAACCATCTCCTGGCCCATCTCGCGC TCGGGACGACCGGCTGCGTCCATGCCGTCGCCTCGCCCCGACAGGAACACAGGACGACGCGTTCGATGCCGCAGT GGAGCAGGCTCTTCCGCGCGCCGGCCGCGGGGCAGGTCCGTATCCGCTGGTGCGACGACCACTGGACCTCGCCGC GAGTTTCCATCGCCTTCCGACTCTTCCCCATAGTCAGCTGCGTGTTCAATTTCGAGGACAACAAGTCGGAGCAGC TATGGCGGGGGATGAACGGGCGCGAGCGGCTCGCGTGGCCTCTGCGGGCGACCATCGACGTCACGAGCGACAGCT ACTGGCTGGGCAGGAAGACGATGGTGGAACAGGTAGTTCGAATACTGCAAGCCCACGCGAACAGCAATCCGTCCC CATGGATATCTGCCTAG |