© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1149 |
| Gene name | |
| Location | Contig_1242:1631..2004 |
| Strand | + |
| Gene length (bp) | 373 |
| Transcript length (bp) | 222 |
| Coding sequence length (bp) | 222 |
| Protein length (aa) | 74 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05051 | COX17 | Cytochrome C oxidase copper chaperone (COX17) | 2.0E-20 | 25 | 73 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12287|COX17_YEAST | Cytochrome c oxidase copper chaperone OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COX17 PE=1 SV=3 | 24 | 73 | 2.0E-10 |
| sp|Q9P7Z7|COX17_SCHPO | Cytochrome c oxidase copper chaperone OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox17 PE=3 SV=1 | 22 | 73 | 5.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005507 | copper ion binding | Yes |
| GO:0005758 | mitochondrial intermembrane space | Yes |
| GO:0016531 | copper chaperone activity | Yes |
| GO:0140104 | molecular carrier activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0005575 | cellular_component | No |
| GO:0016530 | metallochaperone activity | No |
| GO:0031970 | organelle envelope lumen | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0043233 | organelle lumen | No |
| GO:0070013 | intracellular organelle lumen | No |
| GO:0031974 | membrane-enclosed lumen | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Mitochondrion | Mitochondrial transit peptide | 0.5001 | 0.138 | 0.1239 | 0.1729 | 0.8136 | 0.0648 | 0.1138 | 0.0179 | 0.123 | 0.0604 |
| Orthofinder run ID | 4 |
| Orthogroup | 6952 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|2265 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|4317 |
| Ophiocordyceps subramaniannii | Hirsu2|1149 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1149 MEAATPAAVPSVPVTAATSTDSNSRPKPCCVCKEEKSKRDECMLFSSAKDPAADCQSFVNQYKSCMLRYGYNV* |
| Coding | >Hirsu2|1149 ATGGAGGCCGCTACCCCCGCTGCCGTTCCTTCAGTGCCTGTAACGGCCGCCACTTCCACAGACAGCAACTCCCGG CCCAAGCCTTGCTGCGTCTGCAAGGAGGAGAAATCGAAGCGGGATGAGTGCATGCTCTTCTCCTCCGCCAAAGAC CCGGCCGCCGACTGCCAATCCTTCGTCAACCAGTACAAGAGCTGCATGCTGCGCTACGGCTACAATGTGTGA |
| Transcript | >Hirsu2|1149 ATGGAGGCCGCTACCCCCGCTGCCGTTCCTTCAGTGCCTGTAACGGCCGCCACTTCCACAGACAGCAACTCCCGG CCCAAGCCTTGCTGCGTCTGCAAGGAGGAGAAATCGAAGCGGGATGAGTGCATGCTCTTCTCCTCCGCCAAAGAC CCGGCCGCCGACTGCCAATCCTTCGTCAACCAGTACAAGAGCTGCATGCTGCGCTACGGCTACAATGTGTGA |
| Gene | >Hirsu2|1149 ATGGAGGCCGCTACCCCCGCTGCCGTTCGTGCGTCAATCCCTCCTCGGCCCGTCTGGCACGGAAGCGAGAGCTGA CCTCTCATCGTCCGTATAGCTTCAGTGCCTGTAACGGCCGCCACTTCCACAGACAGCAACTCCCGGCCCAAGGTG AGCAGGCCGTTTCTGGACGGCAATCATGGAGCATGGTGTGCCTCCTCCCGCGCCGCGCTGACCAAGTCGTCCTTT TCGTTAGCCTTGCTGCGTCTGCAAGGAGGAGAAATCGAAGCGGGATGAGTGCATGCTCTTCTCCTCCGCCAAAGA CCCGGCCGCCGACTGCCAATCCTTCGTCAACCAGTACAAGAGCTGCATGCTGCGCTACGGCTACAATGTGTGA |