Protein ID | Hirsu2|1144 |
Gene name | |
Location | Contig_1241:24..336 |
Strand | + |
Gene length (bp) | 312 |
Transcript length (bp) | 312 |
Coding sequence length (bp) | 312 |
Protein length (aa) | 104 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10181 | PIG-H | GPI-GlcNAc transferase complex, PIG-H component | 3.0E-27 | 6 | 71 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7L7|GPI15_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi15 PE=3 SV=1 | 4 | 85 | 3.0E-16 |
sp|Q5M9N4|PIGH_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Mus musculus GN=Pigh PE=2 SV=1 | 4 | 91 | 1.0E-07 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Lysosome/Vacuole | 0.3674 | 0.3955 | 0.0698 | 0.4088 | 0.2923 | 0.0787 | 0.3621 | 0.5276 | 0.3952 | 0.0617 |
Orthofinder run ID | 4 |
Orthogroup | 6025 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1144 LHARESLLVLRGLGVQTSAEPRWYLAGRATRFIPTEKIRDILVNEAFRAFEVRYYLVVVVEGEPDLVVVFPRLLP PRRIVEAVWRGARECLYEGRVEEKPQTL* |
Coding | >Hirsu2|1144 CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG CAGACGCTCTAG |
Transcript | >Hirsu2|1144 CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG CAGACGCTCTAG |
Gene | >Hirsu2|1144 CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG CAGACGCTCTAG |