Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1144
Gene name
LocationContig_1241:24..336
Strand+
Gene length (bp)312
Transcript length (bp)312
Coding sequence length (bp)312
Protein length (aa) 104

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10181 PIG-H GPI-GlcNAc transferase complex, PIG-H component 3.0E-27 6 71

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7L7|GPI15_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi15 PE=3 SV=1 4 85 3.0E-16
sp|Q5M9N4|PIGH_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Mus musculus GN=Pigh PE=2 SV=1 4 91 1.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole 0.3674 0.3955 0.0698 0.4088 0.2923 0.0787 0.3621 0.5276 0.3952 0.0617

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6025
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6597
Ophiocordyceps australis map64 (Brazil) OphauB2|6125
Ophiocordyceps camponoti-floridani Ophcf2|05819
Ophiocordyceps kimflemingae Ophio5|5760
Ophiocordyceps subramaniannii Hirsu2|1144 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1144
LHARESLLVLRGLGVQTSAEPRWYLAGRATRFIPTEKIRDILVNEAFRAFEVRYYLVVVVEGEPDLVVVFPRLLP
PRRIVEAVWRGARECLYEGRVEEKPQTL*
Coding >Hirsu2|1144
CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG
GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC
GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG
CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG
CAGACGCTCTAG
Transcript >Hirsu2|1144
CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG
GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC
GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG
CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG
CAGACGCTCTAG
Gene >Hirsu2|1144
CTGCACGCGCGCGAGTCGCTGCTGGTGCTGCGCGGCCTGGGCGTCCAGACGTCGGCCGAGCCGCGCTGGTACCTG
GCCGGTCGTGCCACGCGCTTCATCCCGACCGAGAAGATCCGCGACATCCTCGTCAACGAGGCCTTCCGCGCCTTC
GAGGTCCGCTACTACCTCGTCGTCGTTGTTGAGGGCGAGCCCGACCTCGTCGTCGTCTTCCCGCGCCTGCTGCCG
CCGCGTCGCATCGTTGAGGCGGTCTGGCGCGGGGCGCGTGAGTGCCTGTACGAGGGCCGGGTGGAGGAGAAGCCG
CAGACGCTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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