Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|1141
Gene name
LocationContig_124:32579..33081
Strand+
Gene length (bp)502
Transcript length (bp)465
Coding sequence length (bp)465
Protein length (aa) 155

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5757 0.6226 0.1446 0.1123 0.2259 0.0284 0.0464 0.2255 0.1116 0.0653

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1561
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5672
Ophiocordyceps australis map64 (Brazil) OphauB2|2407
Ophiocordyceps camponoti-floridani Ophcf2|00140
Ophiocordyceps camponoti-rufipedis Ophun1|3540
Ophiocordyceps kimflemingae Ophio5|3797
Ophiocordyceps subramaniannii Hirsu2|1141 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|1141
MSTAKCDMCHRQRCGTIQKCIECKLSVCRPCATDGRLRGDPRHVMDPDDVEWESARMIRSRKMRQSRADAARRSR
EDEGFDEDWDDDLLMADAVGHRSLTPERYSAKSEVENAAEILVGMPGHTPDPIQNSVGQEEHFRLGPLDHSRSLL
ICPR*
Coding >Hirsu2|1141
ATGTCCACGGCCAAATGTGACATGTGCCACAGACAGCGCTGCGGCACGATTCAGAAGTGCATCGAGTGCAAGCTG
TCGGTGTGCAGGCCGTGTGCCACGGACGGCCGTTTGCGCGGCGACCCAAGGCATGTCATGGACCCGGACGACGTG
GAATGGGAATCGGCGCGCATGATTCGAAGCCGAAAGATGAGGCAGTCTCGGGCCGATGCCGCTCGCAGGAGCCGC
GAAGACGAGGGATTCGACGAGGACTGGGACGACGACCTGCTCATGGCCGATGCCGTCGGCCACCGCAGTCTGACG
CCCGAGCGGTATTCCGCCAAGTCGGAAGTCGAAAACGCGGCCGAGATTCTGGTCGGCATGCCCGGCCACACCCCG
GACCCCATTCAGAACTCCGTGGGACAGGAAGAGCACTTCCGCCTGGGGCCGCTTGATCACAGCCGCAGTCTGCTC
ATCTGCCCCCGCTGA
Transcript >Hirsu2|1141
ATGTCCACGGCCAAATGTGACATGTGCCACAGACAGCGCTGCGGCACGATTCAGAAGTGCATCGAGTGCAAGCTG
TCGGTGTGCAGGCCGTGTGCCACGGACGGCCGTTTGCGCGGCGACCCAAGGCATGTCATGGACCCGGACGACGTG
GAATGGGAATCGGCGCGCATGATTCGAAGCCGAAAGATGAGGCAGTCTCGGGCCGATGCCGCTCGCAGGAGCCGC
GAAGACGAGGGATTCGACGAGGACTGGGACGACGACCTGCTCATGGCCGATGCCGTCGGCCACCGCAGTCTGACG
CCCGAGCGGTATTCCGCCAAGTCGGAAGTCGAAAACGCGGCCGAGATTCTGGTCGGCATGCCCGGCCACACCCCG
GACCCCATTCAGAACTCCGTGGGACAGGAAGAGCACTTCCGCCTGGGGCCGCTTGATCACAGCCGCAGTCTGCTC
ATCTGCCCCCGCTGA
Gene >Hirsu2|1141
ATGTCCACGGCCAAATGTGACATGTGCCACAGACAGCGCTGCGGCACGATTCAGAAGTGCATCGAGTGCAAGCTG
TCGGTGTGCAGGCCGTGTGCCACGGACGGCCGTTTGCGCGGCGACCCAAGGCATGTCATGGACCCGGACGACGTG
GAATGGGAATCGGCGCGCATGATTCGAAGCCGAAAGATGAGGCAGTCTCGGGCCGATGCCGCTCGCAGGAGCCGC
GAAGACGAGGGATTCGACGAGGACTGGGACGACGACCTGCTCATGGCCGATGCCGTCGGCCACCGCAGTCTGACG
CCCGAGCGGTATTCCGCCAAGTCGGAAGTCGAAAACGCGGCCGAGATTCTGGTCGGCATGCCCGGCCACACCCCG
GACCCCATTCAGAACTCCGTGGGACAGGAAGAGCACTTCCGCCTGGGGCCGCTTGATCACAGCGTACGTTTACCA
CCGGTCCGCTCCGTCGCGGACCCAGCGCAGTCTGCTCATCTGCCCCCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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