Protein ID | Hirsu2|11262 |
Gene name | |
Location | Contig_996:1621..4347 |
Strand | + |
Gene length (bp) | 2726 |
Transcript length (bp) | 2271 |
Coding sequence length (bp) | 2271 |
Protein length (aa) | 757 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20163 | DUF6536 | Family of unknown function (DUF6536) | 2.6E-30 | 77 | 227 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 86 | 108 | 22 |
2 | 128 | 147 | 19 |
3 | 188 | 210 | 22 |
4 | 225 | 247 | 22 |
5 | 509 | 531 | 22 |
6 | 588 | 607 | 19 |
7 | 620 | 642 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|11262 MDCFCARSLWQRSWGSVGGRGQPRASFLATARDRSSRPTLHHGRANDYRPARSPTAIGNKLPMTRGKRAWADGPP NWRKRAALFLAWTSTVLLALLICLGLSFARGAIGGSAELYSGPCSRAKNANRALQAALALVAIGLSVSFDFFMRL ASSPTIEDLGRAHSQGRSLDIGVQSWRNIRQASWSRRLSWAFLALAAAPLQLFLHSTTFVIFSQTDYTQFIVSPA FTTGGAFAYPGVAFAGTSAFNASSGVRSYFDHVLPSFRSAPGQWERLPAGDCMYQYLQDPNGLQRRRDLLLVVKA KAEGWRGADVWNNTTPRAYPSHAAHEYNPMAFNSLWWFAVRCYQDRVGSDDGRLSTFCCPSFDCYADDDSYNGWR PSYFLSLRASKSFWEGFLLTGLVPDHMDPALGSFTVDYCLSEPYVAPCKLAASTPILLINLACVLVGFASCSLIA YVCWNDESCQSLGDAIQALMGSSDLVFKAAASTDAEPSSVIRWKETRKRWGHVVGRSMWFCTYVPIGLVLVGGSV VFVQFGAPAFPSLYSMLFQGKYWAGFSVRPQRLRVSFPHREQQATYALQCPLVWGLVFVTFKATLGWLLTQALYI VPLAYVSRQKPNINLAGADICMYFGYSVKAMLATLLTGAGAASMPILLCFRPLPRGSLIVATDSAAIAAFCPPAP TEAGPRAALPSQHETMAAWDKAWGARRLLRPLRWGVLKYSGVIDQRPDVLGLGTEDEVLTQPVDGHTYIAVSACK TGDTVE* |
Coding | >Hirsu2|11262 ATGGACTGTTTCTGCGCCCGAAGCCTGTGGCAGCGCAGCTGGGGCAGTGTTGGGGGCCGGGGCCAGCCGCGAGCC TCGTTTCTCGCCACGGCCCGTGACCGCAGCTCACGGCCAACGCTGCACCACGGCCGTGCCAATGACTATAGGCCG GCCCGCAGCCCAACAGCCATCGGCAATAAACTACCCATGACTCGTGGCAAGCGTGCCTGGGCCGACGGGCCGCCG AACTGGCGCAAGCGGGCGGCTCTTTTCCTGGCGTGGACCTCGACCGTCCTCCTCGCTCTCCTCATCTGCCTCGGC CTTTCTTTTGCGCGTGGAGCCATCGGCGGAAGCGCCGAGCTCTACTCCGGACCATGCAGCCGCGCCAAGAACGCC AACCGGGCCCTGCAGGCCGCCCTGGCCCTCGTCGCAATCGGCCTGAGCGTTTCCTTCGACTTCTTCATGCGGCTC GCCTCCTCGCCGACGATCGAGGATCTTGGCCGGGCCCACTCCCAAGGCCGTTCGCTCGACATCGGCGTCCAGTCC TGGCGGAACATACGACAGGCGTCGTGGTCGAGGAGGCTCAGCTGGGCTTTCCTCGCCCTCGCGGCCGCGCCGCTG CAGCTGTTCCTCCATTCCACCACCTTTGTTATCTTTTCCCAGACGGATTATACTCAATTTATCGTTAGCCCGGCT TTTACCACCGGCGGCGCTTTTGCCTATCCCGGAGTCGCATTCGCGGGAACGAGCGCCTTTAATGCCTCCTCGGGC GTGCGATCCTATTTCGACCACGTCCTGCCGAGCTTTCGATCCGCGCCTGGCCAGTGGGAGAGGCTACCGGCGGGT GACTGCATGTATCAATATCTCCAGGACCCGAATGGCCTGCAGCGGCGCCGCGATCTCTTGCTCGTGGTCAAGGCG AAAGCGGAAGGGTGGAGGGGGGCCGACGTCTGGAACAATACCACTCCCAGGGCTTACCCGAGCCACGCGGCTCAC GAATACAACCCCATGGCTTTCAATTCCCTGTGGTGGTTTGCCGTCAGGTGCTATCAAGATCGTGTGGGTAGCGAT GATGGCAGACTGAGCACGTTCTGCTGTCCCTCATTTGATTGTTATGCCGACGACGACTCTTACAATGGATGGAGA CCTTCGTACTTTCTGAGCCTCAGAGCATCCAAGAGTTTCTGGGAAGGGTTTTTATTAACTGGTCTCGTTCCGGAC CACATGGACCCTGCTTTAGGCTCGTTTACCGTCGACTACTGTCTATCGGAGCCTTACGTTGCTCCGTGCAAGCTC GCCGCCTCTACGCCAATTCTCCTCATCAACCTGGCCTGCGTCCTGGTCGGATTTGCGTCTTGTTCCCTTATTGCA TACGTCTGCTGGAACGACGAGTCGTGCCAGAGCCTCGGTGATGCCATCCAGGCCTTGATGGGGAGCAGCGACCTC GTCTTCAAGGCCGCGGCGAGTACCGATGCAGAGCCATCATCCGTCATAAGATGGAAGGAGACCAGGAAACGTTGG GGGCACGTCGTTGGCAGAAGCATGTGGTTCTGTACCTACGTCCCTATCGGCTTGGTCCTCGTAGGGGGGTCGGTC GTGTTCGTACAGTTTGGCGCTCCCGCCTTTCCCTCGCTCTACTCCATGCTATTCCAAGGGAAATATTGGGCCGGC TTCTCGGTCAGGCCTCAGCGGTTGCGAGTGAGTTTCCCTCACAGAGAGCAACAGGCCACTTATGCGCTTCAGTGT CCGCTTGTATGGGGCCTCGTTTTCGTTACGTTCAAGGCAACGCTCGGCTGGTTGCTGACCCAGGCCCTTTACATT GTTCCACTTGCATACGTCTCCCGGCAAAAGCCGAATATTAATCTCGCGGGTGCCGATATCTGCATGTACTTCGGG TATTCCGTCAAGGCAATGCTCGCAACTCTCCTCACTGGCGCAGGCGCTGCCTCGATGCCGATACTGCTCTGTTTT CGCCCTCTGCCCCGTGGTTCACTGATTGTAGCTACCGACTCGGCGGCCATAGCAGCTTTCTGTCCGCCGGCCCCA ACGGAGGCCGGGCCTCGTGCCGCGCTCCCAAGCCAGCATGAGACGATGGCGGCGTGGGATAAAGCCTGGGGAGCA CGCCGGCTTCTTCGACCACTGAGATGGGGTGTGTTGAAATACAGCGGTGTAATAGACCAGCGTCCTGATGTTCTG GGCCTTGGCACCGAGGATGAAGTATTAACCCAGCCGGTCGACGGTCACACGTATATTGCTGTTTCTGCTTGTAAG ACGGGAGATACCGTGGAATGA |
Transcript | >Hirsu2|11262 ATGGACTGTTTCTGCGCCCGAAGCCTGTGGCAGCGCAGCTGGGGCAGTGTTGGGGGCCGGGGCCAGCCGCGAGCC TCGTTTCTCGCCACGGCCCGTGACCGCAGCTCACGGCCAACGCTGCACCACGGCCGTGCCAATGACTATAGGCCG GCCCGCAGCCCAACAGCCATCGGCAATAAACTACCCATGACTCGTGGCAAGCGTGCCTGGGCCGACGGGCCGCCG AACTGGCGCAAGCGGGCGGCTCTTTTCCTGGCGTGGACCTCGACCGTCCTCCTCGCTCTCCTCATCTGCCTCGGC CTTTCTTTTGCGCGTGGAGCCATCGGCGGAAGCGCCGAGCTCTACTCCGGACCATGCAGCCGCGCCAAGAACGCC AACCGGGCCCTGCAGGCCGCCCTGGCCCTCGTCGCAATCGGCCTGAGCGTTTCCTTCGACTTCTTCATGCGGCTC GCCTCCTCGCCGACGATCGAGGATCTTGGCCGGGCCCACTCCCAAGGCCGTTCGCTCGACATCGGCGTCCAGTCC TGGCGGAACATACGACAGGCGTCGTGGTCGAGGAGGCTCAGCTGGGCTTTCCTCGCCCTCGCGGCCGCGCCGCTG CAGCTGTTCCTCCATTCCACCACCTTTGTTATCTTTTCCCAGACGGATTATACTCAATTTATCGTTAGCCCGGCT TTTACCACCGGCGGCGCTTTTGCCTATCCCGGAGTCGCATTCGCGGGAACGAGCGCCTTTAATGCCTCCTCGGGC GTGCGATCCTATTTCGACCACGTCCTGCCGAGCTTTCGATCCGCGCCTGGCCAGTGGGAGAGGCTACCGGCGGGT GACTGCATGTATCAATATCTCCAGGACCCGAATGGCCTGCAGCGGCGCCGCGATCTCTTGCTCGTGGTCAAGGCG AAAGCGGAAGGGTGGAGGGGGGCCGACGTCTGGAACAATACCACTCCCAGGGCTTACCCGAGCCACGCGGCTCAC GAATACAACCCCATGGCTTTCAATTCCCTGTGGTGGTTTGCCGTCAGGTGCTATCAAGATCGTGTGGGTAGCGAT GATGGCAGACTGAGCACGTTCTGCTGTCCCTCATTTGATTGTTATGCCGACGACGACTCTTACAATGGATGGAGA CCTTCGTACTTTCTGAGCCTCAGAGCATCCAAGAGTTTCTGGGAAGGGTTTTTATTAACTGGTCTCGTTCCGGAC CACATGGACCCTGCTTTAGGCTCGTTTACCGTCGACTACTGTCTATCGGAGCCTTACGTTGCTCCGTGCAAGCTC GCCGCCTCTACGCCAATTCTCCTCATCAACCTGGCCTGCGTCCTGGTCGGATTTGCGTCTTGTTCCCTTATTGCA TACGTCTGCTGGAACGACGAGTCGTGCCAGAGCCTCGGTGATGCCATCCAGGCCTTGATGGGGAGCAGCGACCTC GTCTTCAAGGCCGCGGCGAGTACCGATGCAGAGCCATCATCCGTCATAAGATGGAAGGAGACCAGGAAACGTTGG GGGCACGTCGTTGGCAGAAGCATGTGGTTCTGTACCTACGTCCCTATCGGCTTGGTCCTCGTAGGGGGGTCGGTC GTGTTCGTACAGTTTGGCGCTCCCGCCTTTCCCTCGCTCTACTCCATGCTATTCCAAGGGAAATATTGGGCCGGC TTCTCGGTCAGGCCTCAGCGGTTGCGAGTGAGTTTCCCTCACAGAGAGCAACAGGCCACTTATGCGCTTCAGTGT CCGCTTGTATGGGGCCTCGTTTTCGTTACGTTCAAGGCAACGCTCGGCTGGTTGCTGACCCAGGCCCTTTACATT GTTCCACTTGCATACGTCTCCCGGCAAAAGCCGAATATTAATCTCGCGGGTGCCGATATCTGCATGTACTTCGGG TATTCCGTCAAGGCAATGCTCGCAACTCTCCTCACTGGCGCAGGCGCTGCCTCGATGCCGATACTGCTCTGTTTT CGCCCTCTGCCCCGTGGTTCACTGATTGTAGCTACCGACTCGGCGGCCATAGCAGCTTTCTGTCCGCCGGCCCCA ACGGAGGCCGGGCCTCGTGCCGCGCTCCCAAGCCAGCATGAGACGATGGCGGCGTGGGATAAAGCCTGGGGAGCA CGCCGGCTTCTTCGACCACTGAGATGGGGTGTGTTGAAATACAGCGGTGTAATAGACCAGCGTCCTGATGTTCTG GGCCTTGGCACCGAGGATGAAGTATTAACCCAGCCGGTCGACGGTCACACGTATATTGCTGTTTCTGCTTGTAAG ACGGGAGATACCGTGGAATGA |
Gene | >Hirsu2|11262 ATGGACTGTTTCTGCGCCCGAAGCCTGTGGCAGCGCAGCTGGGGCAGTGTTGGGGGCCGGGGCCAGCCGCGAGCC TCGTTTCTCGCCACGGCCCGTGACCGCAGCTCACGGCCAACGCTGCACCACGGCCGTGCCAATGACTATAGGTGG CAACGGTTTCAGACCTCAAATCAGGGCCTCTCGCTGTACATGCATAGCTGCGTCCCCTATCCGGGGCGTGAGTAT AGCCTGCCATGGCCCTATATCAACCTCCTTGCTCGACACGACTGCGAACCCGACCACTTGCCCTTCAAGGCCGGC CCGCAGCCCAACAGCCATCGGCAATAAACTACCCATGACTCGTGGCAAGCGTGCCTGGGCCGACGGGCCGCCGAA CTGGCGCAAGCGGGCGGCTCTTTTCCTGGCGTGGACCTCGACCGTCCTCCTCGCTCTCCTCATCTGCCTCGGCCT TTCTTTTGCGCGTGGAGCCATCGGCGGAAGCGCCGAGCTCTACTCCGGACCATGCAGCCGCGCCAAGAACGCCAA CCGGGCCCTGCAGGCCGCCCTGGCCCTCGTCGCAATCGGCCTGAGCGTTTCCTTCGACTTCTTCATGCGGCTCGC CTCCTCGCCGACGATCGAGGATCTTGGCCGGGCCCACTCCCAAGGCCGTTCGCTCGACATCGGCGTCCAGTCCTG GCGGAACATACGACAGGCGTCGTGGTCGAGGAGGCTCAGCTGGGCTTTCCTCGCCCTCGCGGCCGCGCCGCTGCA GCTGTTCCTCCATTCCACCACCTTTGTTATCTTTTCCCAGACGGATTATACTCAATTTATCGTTAGCCCGGCTTT TACCACCGGCGGCGCTTTTGCCTATCCCGGAGTCGCATTCGCGGGAACGAGCGCCTTTAATGCCTCCTCGGGCGT GCGATCCTATTTCGACCACGTCCTGCCGAGCTTTCGATCCGCGCCTGGCCAGTGGGAGAGGCTACCGGCGGGTGA CTGCATGTATCAATATCTCCAGGACCCGAATGGCCTGCAGCGGCGCCGCGATCTCTTGCTCGTGGTCAAGGCGAA AGCGGAAGGGTGGAGGGGGGCCGACGTCTGGAACAATACCACTCCCAGGGCTTACCCGAGCCACGCGGCTCACGA ATACAACCCCATGGCTTTCAATTCCCTGTGGTGGTTTGCCGTCAGGTGCTATCAAGATCGTGTGGGTAGCGATGA TGGCAGACTGAGCACGTTCTGCTGTCCCTCATTTGATTGTTATGCCGACGACGACTCTTACAATGGATGGAGACC TTCGTACTTTCTGAGCCTCAGAGCATCCAAGAGTTTCTGGGAAGGGTTTTTATTAACTGGTCTCGTTCCGGACCA CATGGACCCTGCTTTAGGCTCGTTTACCGTCGACTACTGTCTATCGGAGCCTTACGTTGCTCCGTGCAAGCTCGC CGCCTCTACGCCAATTCTCCTCATCAACCTGGCCTGCGTCCTGGTCGGATTTGCGTCTTGTTCCCTTATTGCATA CGTCTGCTGGAACGACGAGTCGTGCCAGAGCCTCGGTGATGCCATCCAGGCCTTGATGGGGAGCAGCGACCTCGT CTTCAAGGCCGCGGCGAGTACCGATGCAGAGCCATCATCCGTCATAAGATGGAAGGAGACCAGGAAACGTTGGGG GCACGTCGTTGGCAGAAGCATGTGGTTCTGTACCTACGTCCCTATCGGCTTGGTCCTCGTAGGGGGGTCGGTCGT GTTCGTACAGTTTGGCGCTCCCGCCTTTCCGTGAGTGTCTTTTTCCGAGCCTCAATACCGATCTGTTACACGTTT TTTTATTGCTAAGCAATTGGCAGTTACGATCATGGATTTGGAGAGGATCTCGGCAACAGATTAATGAATATATAT GGGCCATCGGGCAGATGGAGTCCGCCCTTTCCGCCCATGGGAACGAGGGGGCTGATCCTCAGCTCCCTGGTGGTC AACGTTCCGCAACTTGCCATATCCACTTACTACTTCCTATTCAGCTCGCTCTACTCCATGCTATTCCAAGGGAAA TATTGGGCCGGCTTCTCGGTCAGGCCTCAGCGGTTGCGAGTGAGTTTCCCTCACAGAGAGCAACAGGCCACTTAT GCGCTTCAGTGTCCGCTTGTATGGGGCCTCGTTTTCGTTACGTTCAAGGCAACGCTCGGCTGGTTGCTGACCCAG GCCCTTTACATTGTTCCACTTGCATGTGAGTGATCCAACGCAGAGGATGAGAAATACAGCTCTTGCGAAAATATA ACATCTAACTTTTCATAGACGTCTCCCGGCAAAAGCCGAATATTAATCTCGCGGGTGCCGATATCTGCATGTACT TCGGGTATTCCGTCAAGGCAATGCTCGCAACTCTCCTCACTGGCGCAGGCGCTGCCTCGATGCCGATACTGCTCT GTTTTCGCCCTCTGCCCCGTGGTTCACTGATTGTAGCTACCGACTCGGCGGCCATAGCAGCTTTCTGTCCGCCGG CCCCAACGGAGGCCGGGCCTCGTGCCGCGCTCCCAAGCCAGCATGAGACGATGGCGGCGTGGGATAAAGCCTGGG GAGCACGCCGGCTTCTTCGACCACTGAGATGGGGTGTGTTGAAATACAGCGGTGTAATAGACCAGCGTCCTGATG TTCTGGGCCTTGGCACCGAGGATGAAGTATTAACCCAGCCGGTCGACGGTCACACGTATATTGCTGTTTCTGCTT GTAAGACGGGAGATACCGTGGAATGA |