Protein ID | Hirsu2|1124 |
Gene name | |
Location | Contig_1238:167..2090 |
Strand | + |
Gene length (bp) | 1923 |
Transcript length (bp) | 1530 |
Coding sequence length (bp) | 1530 |
Protein length (aa) | 510 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 3.3E-29 | 192 | 468 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6CMK7|SLD1_KLULA | Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SLD PE=3 SV=1 | 1 | 509 | 3.0E-131 |
sp|Q8NKG8|SLD1_KLULC | Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis GN=SLD PE=1 SV=1 | 1 | 509 | 8.0E-130 |
sp|Q8NKG9|SLD1_LACK1 | Delta 8-(E)-sphingolipid desaturase OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=SLD PE=1 SV=1 | 1 | 505 | 6.0E-125 |
sp|Q5AEK8|SLD1_CANAL | Delta 8-(E)-sphingolipid desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLD1 PE=1 SV=1 | 4 | 499 | 3.0E-121 |
sp|C4QVU3|SLD1_PICPG | Delta 8-(E)-sphingolipid desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr1-1_0013 PE=3 SV=1 | 1 | 496 | 4.0E-110 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6CMK7|SLD1_KLULA | Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SLD PE=3 SV=1 | 1 | 509 | 3.0E-131 |
sp|Q8NKG8|SLD1_KLULC | Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis GN=SLD PE=1 SV=1 | 1 | 509 | 8.0E-130 |
sp|Q8NKG9|SLD1_LACK1 | Delta 8-(E)-sphingolipid desaturase OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=SLD PE=1 SV=1 | 1 | 505 | 6.0E-125 |
sp|Q5AEK8|SLD1_CANAL | Delta 8-(E)-sphingolipid desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLD1 PE=1 SV=1 | 4 | 499 | 3.0E-121 |
sp|C4QVU3|SLD1_PICPG | Delta 8-(E)-sphingolipid desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr1-1_0013 PE=3 SV=1 | 1 | 496 | 4.0E-110 |
sp|Q43469|SLD1_HELAN | Delta(8)-fatty-acid desaturase OS=Helianthus annuus GN=sld1 PE=1 SV=1 | 132 | 495 | 7.0E-64 |
sp|Q3EBF7|SLD2_ARATH | Delta(8)-fatty-acid desaturase 2 OS=Arabidopsis thaliana GN=SLD2 PE=1 SV=1 | 54 | 491 | 2.0E-58 |
sp|Q9FR82|SLD1_BOROF | Delta(8)-fatty-acid desaturase OS=Borago officinalis GN=sld1 PE=1 SV=1 | 106 | 493 | 2.0E-52 |
sp|Q9ZRP7|SLD1_ARATH | Delta(8)-fatty-acid desaturase 1 OS=Arabidopsis thaliana GN=SLD1 PE=1 SV=1 | 196 | 491 | 5.0E-51 |
sp|Q23221|FAT3_CAEEL | Delta(6)-fatty-acid desaturase fat-3 OS=Caenorhabditis elegans GN=fat-3 PE=2 SV=2 | 141 | 491 | 8.0E-40 |
sp|G5EG11|FAT4_CAEEL | Delta(5) fatty acid desaturase fat-4 OS=Caenorhabditis elegans GN=fat-4 PE=2 SV=1 | 146 | 495 | 3.0E-33 |
sp|Q9SWQ9|SLD1_EUGGR | Delta(8)-fatty-acid desaturase OS=Euglena gracilis GN=efd1 PE=1 SV=1 | 132 | 467 | 7.0E-23 |
sp|Q4G2T3|DESAT_THAPS | Sphingolipid 10-desaturase OS=Thalassiosira pseudonana GN=desA PE=1 SV=2 | 193 | 486 | 2.0E-17 |
sp|Q9DEX7|FADS2_DANRE | Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1 | 136 | 467 | 2.0E-16 |
sp|A4KDP0|D5FAD_REBSA | Acyl-lipid (8-3)-desaturase OS=Rebecca salina GN=D5Des PE=1 SV=1 | 146 | 487 | 3.0E-16 |
sp|Q9JJE7|FADS3_MOUSE | Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2 | 134 | 488 | 6.0E-16 |
sp|Q9Y5Q0|FADS3_HUMAN | Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1 | 134 | 488 | 1.0E-15 |
sp|A4KDP1|D8FAD_REBSA | Acyl-lipid 8-desaturase OS=Rebecca salina GN=D8Des PE=2 SV=1 | 124 | 467 | 2.0E-15 |
sp|A4IFP3|FADS3_BOVIN | Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1 | 134 | 488 | 3.0E-15 |
sp|Q9Z0R9|FADS2_MOUSE | Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=1 SV=1 | 86 | 491 | 7.0E-15 |
sp|Q0VAX3|FS2P1_MOUSE | Fatty acid desaturase 2-like protein FADS2P1 OS=Mus musculus GN=Fads2p1 PE=2 SV=1 | 78 | 491 | 8.0E-15 |
sp|Q8K1P9|FADS3_RAT | Fatty acid desaturase 3 OS=Rattus norvegicus GN=Fads3 PE=2 SV=1 | 134 | 488 | 1.0E-14 |
sp|Q9Z122|FADS2_RAT | Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1 | 86 | 491 | 1.0E-14 |
sp|A4UVI1|FADS1_PAPAN | Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=1 SV=1 | 134 | 491 | 3.0E-14 |
sp|O60427|FADS1_HUMAN | Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=3 | 134 | 491 | 2.0E-13 |
sp|A4FV48|FADS2_BOVIN | Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1 | 136 | 490 | 5.0E-12 |
sp|Q4R749|FADS2_MACFA | Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1 | 136 | 467 | 2.0E-11 |
sp|Q920L1|FADS1_MOUSE | Fatty acid desaturase 1 OS=Mus musculus GN=Fads1 PE=1 SV=1 | 134 | 467 | 3.0E-11 |
sp|O95864|FADS2_HUMAN | Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1 | 136 | 467 | 4.0E-11 |
sp|Q5REA7|FADS2_PONAB | Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1 | 136 | 467 | 5.0E-11 |
sp|Q8S3C1|D5FAD_THRSP | Acyl-lipid (8-3)-desaturase OS=Thraustochytrium sp. GN=Fad5 PE=1 SV=1 | 63 | 497 | 7.0E-11 |
sp|A8MWK0|FS2P1_HUMAN | Putative fatty acid desaturase 2-like protein FADS2P1 OS=Homo sapiens GN=FADS2P1 PE=5 SV=2 | 209 | 491 | 1.0E-09 |
sp|Q08871|LLCD_SYNY3 | Acyl-CoA 6-desaturase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=des6 PE=4 SV=1 | 210 | 469 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0071704 | organic substance metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0008150 | biological_process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | 0.3775 | 0.1765 | 0.1024 | 0.2171 | 0.2288 | 0.0818 | 0.4033 | 0.3407 | 0.4385 | 0.0281 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 180 | 202 | 22 |
2 | 222 | 244 | 22 |
3 | 305 | 327 | 22 |
4 | 347 | 366 | 19 |
5 | 373 | 395 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 267 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|1124 MRAYRIGRKPTGPWANMTPPIRGGHFRRLDTLSPCLPPHDMGGAGAAAAPGLLVPDQADAAWDASSDMSATSSSD LERAVRRRPPGKPAADRIRAGGLAAESDDDDEAPALIGRCPATYTDWAVQQGVEQGLRDYPSLDPAVQQGIVDSY RALHRRVVDEGLYDCPYREYAKEMARYTCLFAAFLVALHHAWYLTSAVFLGLFWHQIMFTAHDAGHRAISQIFVV DTLIGMFIADFCCGLSIGWWKSSHNVHHLVTNQPEHDPDIQNVPLFATCPSFFKSLTSTYYNFRFVWDAAADALV PFQKYTYYPVMGIARFNLYLLSWLHVLSPKASALSLSSAWWIRPTEIAFMSCYWFLFGYCLLLRTLPTWPIRVAF VLVSHIVTMPLHVQITLSHWGMSTAHLGESESFAQRQLRTTMDVDCPPWLDFVHGGLQFQAVHHLFPRLPRHNLR RAQVLTREFCQKTGVPYTILGFVDGNQKVLGRLQDVSDQLKILVKCQKYMAETGESGLH* |
Coding | >Hirsu2|1124 ATGAGGGCCTACCGGATCGGCCGGAAGCCAACGGGGCCCTGGGCCAACATGACGCCGCCAATAAGAGGCGGCCAC TTCCGCCGCCTCGACACCCTCTCGCCCTGCCTGCCGCCGCACGACATGGGTGGCGCCGGTGCCGCGGCTGCGCCT GGTCTCCTCGTACCCGACCAGGCCGACGCCGCCTGGGACGCCTCGTCTGACATGTCGGCCACCAGCTCGTCCGAC CTCGAGCGCGCCGTCCGCCGGCGGCCCCCCGGGAAGCCGGCCGCGGACCGGATCCGCGCCGGGGGCCTGGCTGCC GAGAGCGACGACGACGACGAGGCGCCCGCTCTCATCGGCCGCTGTCCCGCCACCTACACCGACTGGGCCGTCCAG CAGGGCGTCGAGCAGGGCCTGCGCGACTATCCGTCCCTCGACCCGGCCGTGCAGCAGGGCATCGTCGACAGCTAC CGCGCCCTGCACCGGAGGGTCGTCGACGAGGGGCTCTACGACTGTCCCTACCGCGAGTACGCCAAGGAGATGGCA CGCTACACCTGCCTGTTCGCTGCCTTTCTCGTGGCCTTGCACCACGCTTGGTACCTGACCTCGGCCGTCTTTCTT GGCCTGTTCTGGCATCAGATCATGTTCACGGCCCACGACGCCGGCCATCGGGCCATCAGCCAGATCTTCGTCGTC GACACCCTCATCGGCATGTTCATCGCCGACTTCTGCTGCGGCCTGTCCATCGGATGGTGGAAGAGCAGCCACAAC GTCCACCACCTCGTCACCAACCAACCGGAGCATGATCCGGATATCCAGAACGTCCCCCTCTTCGCCACCTGCCCT TCGTTCTTCAAGTCCCTCACCTCGACCTACTACAACTTCCGCTTCGTCTGGGACGCCGCGGCCGACGCCCTGGTG CCCTTCCAGAAATACACCTACTACCCCGTCATGGGCATCGCCCGCTTCAACCTCTACCTGCTCTCCTGGCTGCAC GTGCTGTCGCCCAAGGCGTCGGCCCTGTCCCTGAGCTCGGCCTGGTGGATCCGGCCGACCGAGATCGCCTTCATG TCCTGCTACTGGTTCCTCTTCGGCTACTGCCTGCTGCTGCGCACGCTGCCGACCTGGCCGATCCGCGTCGCCTTC GTCCTCGTCTCGCACATCGTCACCATGCCGCTGCACGTCCAGATCACGCTGTCGCACTGGGGCATGTCGACGGCC CACCTCGGCGAGTCCGAGTCCTTCGCCCAGCGACAGCTGCGCACCACCATGGACGTCGACTGCCCGCCCTGGCTC GACTTCGTCCACGGCGGCCTGCAGTTCCAGGCCGTCCACCACCTGTTCCCCCGCCTGCCGCGCCACAACCTGCGC AGGGCCCAGGTCCTGACCCGCGAGTTTTGCCAGAAGACGGGCGTCCCGTATACCATCTTGGGTTTCGTCGACGGC AACCAAAAGGTGCTCGGTCGGCTGCAGGACGTGAGCGACCAGCTCAAGATACTCGTCAAGTGCCAGAAGTACATG GCCGAGACTGGAGAGAGCGGATTGCACTGA |
Transcript | >Hirsu2|1124 ATGAGGGCCTACCGGATCGGCCGGAAGCCAACGGGGCCCTGGGCCAACATGACGCCGCCAATAAGAGGCGGCCAC TTCCGCCGCCTCGACACCCTCTCGCCCTGCCTGCCGCCGCACGACATGGGTGGCGCCGGTGCCGCGGCTGCGCCT GGTCTCCTCGTACCCGACCAGGCCGACGCCGCCTGGGACGCCTCGTCTGACATGTCGGCCACCAGCTCGTCCGAC CTCGAGCGCGCCGTCCGCCGGCGGCCCCCCGGGAAGCCGGCCGCGGACCGGATCCGCGCCGGGGGCCTGGCTGCC GAGAGCGACGACGACGACGAGGCGCCCGCTCTCATCGGCCGCTGTCCCGCCACCTACACCGACTGGGCCGTCCAG CAGGGCGTCGAGCAGGGCCTGCGCGACTATCCGTCCCTCGACCCGGCCGTGCAGCAGGGCATCGTCGACAGCTAC CGCGCCCTGCACCGGAGGGTCGTCGACGAGGGGCTCTACGACTGTCCCTACCGCGAGTACGCCAAGGAGATGGCA CGCTACACCTGCCTGTTCGCTGCCTTTCTCGTGGCCTTGCACCACGCTTGGTACCTGACCTCGGCCGTCTTTCTT GGCCTGTTCTGGCATCAGATCATGTTCACGGCCCACGACGCCGGCCATCGGGCCATCAGCCAGATCTTCGTCGTC GACACCCTCATCGGCATGTTCATCGCCGACTTCTGCTGCGGCCTGTCCATCGGATGGTGGAAGAGCAGCCACAAC GTCCACCACCTCGTCACCAACCAACCGGAGCATGATCCGGATATCCAGAACGTCCCCCTCTTCGCCACCTGCCCT TCGTTCTTCAAGTCCCTCACCTCGACCTACTACAACTTCCGCTTCGTCTGGGACGCCGCGGCCGACGCCCTGGTG CCCTTCCAGAAATACACCTACTACCCCGTCATGGGCATCGCCCGCTTCAACCTCTACCTGCTCTCCTGGCTGCAC GTGCTGTCGCCCAAGGCGTCGGCCCTGTCCCTGAGCTCGGCCTGGTGGATCCGGCCGACCGAGATCGCCTTCATG TCCTGCTACTGGTTCCTCTTCGGCTACTGCCTGCTGCTGCGCACGCTGCCGACCTGGCCGATCCGCGTCGCCTTC GTCCTCGTCTCGCACATCGTCACCATGCCGCTGCACGTCCAGATCACGCTGTCGCACTGGGGCATGTCGACGGCC CACCTCGGCGAGTCCGAGTCCTTCGCCCAGCGACAGCTGCGCACCACCATGGACGTCGACTGCCCGCCCTGGCTC GACTTCGTCCACGGCGGCCTGCAGTTCCAGGCCGTCCACCACCTGTTCCCCCGCCTGCCGCGCCACAACCTGCGC AGGGCCCAGGTCCTGACCCGCGAGTTTTGCCAGAAGACGGGCGTCCCGTATACCATCTTGGGTTTCGTCGACGGC AACCAAAAGGTGCTCGGTCGGCTGCAGGACGTGAGCGACCAGCTCAAGATACTCGTCAAGTGCCAGAAGTACATG GCCGAGACTGGAGAGAGCGGATTGCACTGA |
Gene | >Hirsu2|1124 ATGAGGGCCTACCGGATCGGCCGGAAGCCAACGGGGCCCTGGGCCAACATGACGCCGCCAATAAGAGGCGGCCAC TTCCGCCGCCTCGACACCCTCTCGCCCTGCCTGCCGCCGCACGACATGGGTGGCGCCGGTGCCGCGGCTGCGCCT GGTCTCCTCGTACCCGACCAGGCCGACGCCGCCTGGGACGCCTCGTCTGACATGTCGGCCACCAGCTCGTCCGAC CTCGAGCGCGCCGTCCGCCGGCGGCCCCCCGGGAAGCCGGCCGCGGACCGGATCCGCGCCGGGGGCCTGGCTGCC GAGAGCGACGACGACGACGAGGCGCCCGCTCTCATCGGCCGCTGTCCCGCCACCTACACCGACTGGGCCGTCCAG CAGGGCGTCGAGCAGGGCCTGCGCGACTATCCGTCCCTCGACCCGGCCGTGCAGCAGGGCATCGTCGACAGCTAC CGCGCCCTGCACCGGAGGGTCGTCGACGAGGGGCTCTACGACTGTCCCTACCGCGAGTACGCCAAGGAGATGGCA CGCTACACCTGCCTGTTCGCTGCCTTTCTCGTGGCCTTGCACCACGCTTGGTACCTGACCTCGGCCGTCTTTCTT GGCCTGTTCTGGGTACTTTTTTTTTCCTTTTTTTTNNNNNNNNNNNNNTTTTTTTTTTTCTCTTTCCCCTTTCAG TCTCTCCTTACCTTAGACACACCCGTTCTCTTTTTCGTCTGGCCTCGAGCAGCACGCCTTTCTTTTCCCGTCTGG TCTCGAGAACACCTCTTTCTTTTTCTTTCTGCCTCATCCCTTCAAACTACCTCCCCCTTGCTTGGCTGTCGATGT CTTGGACCCTTGTCCCTTGTCGTGCTGTGCCATGGCCTCTCACACACTCGACAGCATCAGATCATGTTCACGGCC CACGACGCCGGCCATCGGGCCATCAGCCAGATCTTCGTCGTCGACACCCTCATCGGCATGTTCATCGCCGACTTC TGCTGCGGCCTGTCCATCGGATGGTGGAAGAGCAGCCACAACGTCCACCACCTCGTCACCAACCAACCGGTACGT TCTTGTTTCTCTCCCTCCCATCGAACCCCATCATCGCCCCAGCCTCCTGNNCCCCCCCCTTCCTCTCAACTGCGC TGTCATGAGTGGCAGTGGCTGATGCCTGTTTCTTCGGGCGCGCAGGAGCATGATCCGGATATCCAGAACGTCCCC CTCTTCGCCACCTGCCCTTCGTTCTTCAAGTCCCTCACCTCGACCTACTACAACTTCCGCTTCGTCTGGGACGCC GCGGCCGACGCCCTGGTGCCCTTCCAGAAATACACCTACTACCCCGTCATGGGCATCGCCCGCTTCAACCTCTAC CTGCTCTCCTGGCTGCACGTGCTGTCGCCCAAGGCGTCGGCCCTGTCCCTGAGCTCGGCCTGGTGGATCCGGCCG ACCGAGATCGCCTTCATGTCCTGCTACTGGTTCCTCTTCGGCTACTGCCTGCTGCTGCGCACGCTGCCGACCTGG CCGATCCGCGTCGCCTTCGTCCTCGTCTCGCACATCGTCACCATGCCGCTGCACGTCCAGATCACGCTGTCGCAC TGGGGCATGTCGACGGCCCACCTCGGCGAGTCCGAGTCCTTCGCCCAGCGACAGCTGCGCACCACCATGGACGTC GACTGCCCGCCCTGGCTCGACTTCGTCCACGGCGGCCTGCAGTTCCAGGCCGTCCACCACCTGTTCCCCCGCCTG CCGCGCCACAACCTGCGCAGGGCCCAGGTCCTGACCCGCGAGTTTTGCCAGAAGACGGGCGTCCCGTATACCATC TTGGGTTTCGTCGACGGCAACCAAAAGGTGCTCGGTCGGCTGCAGGACGTGAGCGACCAGCTCAAGATACTCGTC AAGTGCCAGAAGTACATGGCCGAGACTGGAGAGAGCGGATTGCACTGA |