© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|11233 |
| Gene name | |
| Location | Contig_99:29536..31009 |
| Strand | + |
| Gene length (bp) | 1473 |
| Transcript length (bp) | 1392 |
| Coding sequence length (bp) | 1392 |
| Protein length (aa) | 464 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01569 | PAP2 | PAP2 superfamily | 1.7E-22 | 116 | 348 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q05521|DPP1_YEAST | Diacylglycerol pyrophosphate phosphatase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DPP1 PE=1 SV=1 | 11 | 223 | 3.0E-18 |
| sp|Q9ZU49|LPP1_ARATH | Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2 | 16 | 215 | 5.0E-17 |
| sp|Q9UUA6|DPP1_SCHPO | Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpp1 PE=3 SV=1 | 43 | 218 | 5.0E-17 |
| sp|Q8LFD1|LPP3_ARATH | Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1 | 15 | 215 | 2.0E-16 |
| sp|Q86AF0|Y7151_DICDI | PA-phosphatase related-family protein DDB_G0271516 OS=Dictyostelium discoideum GN=DDB_G0271516 PE=3 SV=1 | 21 | 216 | 1.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q05521|DPP1_YEAST | Diacylglycerol pyrophosphate phosphatase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DPP1 PE=1 SV=1 | 11 | 223 | 3.0E-18 |
| sp|Q9ZU49|LPP1_ARATH | Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2 | 16 | 215 | 5.0E-17 |
| sp|Q9UUA6|DPP1_SCHPO | Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpp1 PE=3 SV=1 | 43 | 218 | 5.0E-17 |
| sp|Q8LFD1|LPP3_ARATH | Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1 | 15 | 215 | 2.0E-16 |
| sp|Q86AF0|Y7151_DICDI | PA-phosphatase related-family protein DDB_G0271516 OS=Dictyostelium discoideum GN=DDB_G0271516 PE=3 SV=1 | 21 | 216 | 1.0E-14 |
| sp|Q8MXL9|Y5547_DICDI | PA-phosphatase related-family protein DDB_G0275547 OS=Dictyostelium discoideum GN=DDB_G0275547 PE=3 SV=2 | 21 | 218 | 3.0E-13 |
| sp|Q0WNG6|LPP4_ARATH | Probable lipid phosphate phosphatase 4 OS=Arabidopsis thaliana GN=LPP4 PE=2 SV=1 | 5 | 218 | 1.0E-11 |
| sp|Q9XI60|LPP2_ARATH | Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1 | 41 | 218 | 1.0E-09 |
| sp|Q04396|LPP1_YEAST | Lipid phosphate phosphatase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LPP1 PE=1 SV=1 | 48 | 208 | 1.0E-07 |
| sp|Q3UMZ3|PLPP5_MOUSE | Phospholipid phosphatase 5 OS=Mus musculus GN=Plpp5 PE=2 SV=1 | 25 | 221 | 2.0E-07 |
| sp|Q8NEB5|PLPP5_HUMAN | Phospholipid phosphatase 5 OS=Homo sapiens GN=PLPP5 PE=1 SV=2 | 129 | 221 | 5.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| 2 | 68 | 90 | 22 |
| 3 | 110 | 132 | 22 |
| 4 | 297 | 319 | 22 |
| 5 | 324 | 346 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|11233 MAHSGSSSQSLHSPLRLTASYAFDWIVLIIVVVIAGFLGRIEPNKRPFALDDPNISFPFTVDQTVPTWLLVVLCG LAPAIIIFLVSILLVPGATVPKNTPQSLIWKRKMWELHVGWLGLLLAVGSAFFFISGIKNMCGKPRPDLLNRCQP DLANRDMYLVGGFKDEAVSGRLYSGKICKQQDKYKLDDGFRSYPSGHAAASAAGLIYLSLYLASKFAVTLPFVVP NANRHADASMHAAFPSRVKDNTDSAAYEVASLRNDFGYGDGSMAKPGTVAQRSAQHNVKIQSLRRQAAAPPIYLL AITLAPFCLSIFISASRWFDFRHHGFDILFGFLIGTICAIYSFRYYHMPIREGAGWAWGPRSGDRAFWAGVGRLG YAGQRSDFDANVNRADLGESGDVDLNLAPPPNQPMSSGGSVNYRAAAYGPSTQQPGPFQDVEMERMEHHRAMAQP VGHPGHPSTSRAF* |
| Coding | >Hirsu2|11233 ATGGCCCACTCCGGGTCGTCGTCGCAGAGCCTCCACTCGCCACTGCGTCTTACTGCTTCCTACGCCTTTGACTGG ATCGTCCTCATCATCGTCGTCGTCATCGCTGGCTTTCTCGGTCGCATCGAGCCCAACAAGCGGCCCTTTGCGCTC GACGATCCCAACATCTCGTTTCCCTTCACCGTCGACCAAACAGTCCCGACATGGCTGCTCGTCGTTCTCTGCGGC CTCGCGCCTGCCATCATCATCTTTCTCGTCTCCATCCTCCTGGTGCCCGGGGCCACCGTTCCTAAGAACACGCCC CAGTCGCTCATCTGGAAGCGCAAGATGTGGGAGCTCCACGTCGGCTGGCTTGGCCTCCTCCTTGCCGTCGGATCC GCCTTCTTCTTCATCAGCGGCATCAAGAACATGTGTGGCAAGCCGCGCCCCGACCTGCTGAATCGCTGCCAGCCC GACCTCGCCAACCGCGACATGTACCTGGTCGGCGGTTTCAAGGACGAGGCCGTCTCCGGCCGACTCTACTCGGGC AAGATCTGCAAGCAACAGGACAAGTACAAGCTCGACGACGGCTTCCGCAGCTATCCCAGCGGCCACGCCGCCGCC TCGGCCGCCGGGCTCATCTATCTGTCCCTCTACCTCGCCAGCAAGTTCGCCGTCACGCTCCCCTTCGTCGTGCCC AATGCGAACAGGCATGCCGATGCCTCGATGCACGCCGCCTTCCCGTCGCGCGTCAAGGACAACACCGACTCGGCC GCGTACGAGGTCGCGAGCCTGCGCAACGACTTCGGCTACGGCGATGGGTCCATGGCCAAGCCCGGCACCGTCGCC CAGCGCAGTGCGCAGCACAACGTCAAGATCCAGTCGCTGCGCCGCCAAGCCGCCGCGCCGCCCATCTATCTCCTC GCCATCACCCTCGCGCCCTTTTGCCTGTCCATCTTCATCTCGGCGTCCCGCTGGTTCGACTTCCGCCACCACGGC TTCGACATCCTATTCGGCTTCCTGATCGGCACCATCTGCGCCATCTACAGTTTCCGCTACTACCACATGCCCATC CGCGAGGGCGCCGGCTGGGCCTGGGGTCCCCGCAGCGGCGACCGCGCCTTCTGGGCCGGCGTTGGTCGCCTGGGC TATGCCGGCCAGCGGTCCGACTTCGACGCCAACGTGAACCGGGCCGACCTCGGCGAGTCGGGCGACGTGGACCTG AACCTCGCGCCGCCGCCCAACCAGCCTATGAGCTCGGGTGGCAGCGTCAATTACCGCGCCGCCGCATACGGGCCC AGCACCCAGCAGCCCGGTCCGTTCCAGGACGTCGAAATGGAGAGGATGGAGCACCATCGTGCCATGGCCCAGCCA GTGGGCCATCCAGGACATCCGTCGACGAGCCGTGCCTTTTAA |
| Transcript | >Hirsu2|11233 ATGGCCCACTCCGGGTCGTCGTCGCAGAGCCTCCACTCGCCACTGCGTCTTACTGCTTCCTACGCCTTTGACTGG ATCGTCCTCATCATCGTCGTCGTCATCGCTGGCTTTCTCGGTCGCATCGAGCCCAACAAGCGGCCCTTTGCGCTC GACGATCCCAACATCTCGTTTCCCTTCACCGTCGACCAAACAGTCCCGACATGGCTGCTCGTCGTTCTCTGCGGC CTCGCGCCTGCCATCATCATCTTTCTCGTCTCCATCCTCCTGGTGCCCGGGGCCACCGTTCCTAAGAACACGCCC CAGTCGCTCATCTGGAAGCGCAAGATGTGGGAGCTCCACGTCGGCTGGCTTGGCCTCCTCCTTGCCGTCGGATCC GCCTTCTTCTTCATCAGCGGCATCAAGAACATGTGTGGCAAGCCGCGCCCCGACCTGCTGAATCGCTGCCAGCCC GACCTCGCCAACCGCGACATGTACCTGGTCGGCGGTTTCAAGGACGAGGCCGTCTCCGGCCGACTCTACTCGGGC AAGATCTGCAAGCAACAGGACAAGTACAAGCTCGACGACGGCTTCCGCAGCTATCCCAGCGGCCACGCCGCCGCC TCGGCCGCCGGGCTCATCTATCTGTCCCTCTACCTCGCCAGCAAGTTCGCCGTCACGCTCCCCTTCGTCGTGCCC AATGCGAACAGGCATGCCGATGCCTCGATGCACGCCGCCTTCCCGTCGCGCGTCAAGGACAACACCGACTCGGCC GCGTACGAGGTCGCGAGCCTGCGCAACGACTTCGGCTACGGCGATGGGTCCATGGCCAAGCCCGGCACCGTCGCC CAGCGCAGTGCGCAGCACAACGTCAAGATCCAGTCGCTGCGCCGCCAAGCCGCCGCGCCGCCCATCTATCTCCTC GCCATCACCCTCGCGCCCTTTTGCCTGTCCATCTTCATCTCGGCGTCCCGCTGGTTCGACTTCCGCCACCACGGC TTCGACATCCTATTCGGCTTCCTGATCGGCACCATCTGCGCCATCTACAGTTTCCGCTACTACCACATGCCCATC CGCGAGGGCGCCGGCTGGGCCTGGGGTCCCCGCAGCGGCGACCGCGCCTTCTGGGCCGGCGTTGGTCGCCTGGGC TATGCCGGCCAGCGGTCCGACTTCGACGCCAACGTGAACCGGGCCGACCTCGGCGAGTCGGGCGACGTGGACCTG AACCTCGCGCCGCCGCCCAACCAGCCTATGAGCTCGGGTGGCAGCGTCAATTACCGCGCCGCCGCATACGGGCCC AGCACCCAGCAGCCCGGTCCGTTCCAGGACGTCGAAATGGAGAGGATGGAGCACCATCGTGCCATGGCCCAGCCA GTGGGCCATCCAGGACATCCGTCGACGAGCCGTGCCTTTTAA |
| Gene | >Hirsu2|11233 ATGGCCCACTCCGGGTCGTCGTCGCAGAGCCTCCACTCGCCACTGCGTCTTACTGCTTCCTACGCCTTTGACTGG ATCGTCCTCATCATCGTCGTCGTCATCGCTGGCTTTCTCGGTCGCATCGAGCCCAACAAGCGGCCCTTTGCGCTC GACGATCCCAACATCTCGTCAGTCCACGACGTCCCGACCAGACAGACATGGGCCGACACGCCCTTGCCGCGCACG CATTGCTGACTCGTTCGTCCCAGGTTTCCCTTCACCGTCGACCAAACAGTCCCGACATGGCTGCTCGTCGTTCTC TGCGGCCTCGCGCCTGCCATCATCATCTTTCTCGTCTCCATCCTCCTGGTGCCCGGGGCCACCGTTCCTAAGAAC ACGCCCCAGTCGCTCATCTGGAAGCGCAAGATGTGGGAGCTCCACGTCGGCTGGCTTGGCCTCCTCCTTGCCGTC GGATCCGCCTTCTTCTTCATCAGCGGCATCAAGAACATGTGTGGCAAGCCGCGCCCCGACCTGCTGAATCGCTGC CAGCCCGACCTCGCCAACCGCGACATGTACCTGGTCGGCGGTTTCAAGGACGAGGCCGTCTCCGGCCGACTCTAC TCGGGCAAGATCTGCAAGCAACAGGACAAGTACAAGCTCGACGACGGCTTCCGCAGCTATCCCAGCGGCCACGCC GCCGCCTCGGCCGCCGGGCTCATCTATCTGTCCCTCTACCTCGCCAGCAAGTTCGCCGTCACGCTCCCCTTCGTC GTGCCCAATGCGAACAGGCATGCCGATGCCTCGATGCACGCCGCCTTCCCGTCGCGCGTCAAGGACAACACCGAC TCGGCCGCGTACGAGGTCGCGAGCCTGCGCAACGACTTCGGCTACGGCGATGGGTCCATGGCCAAGCCCGGCACC GTCGCCCAGCGCAGTGCGCAGCACAACGTCAAGATCCAGTCGCTGCGCCGCCAAGCCGCCGCGCCGCCCATCTAT CTCCTCGCCATCACCCTCGCGCCCTTTTGCCTGTCCATCTTCATCTCGGCGTCCCGCTGGTTCGACTTCCGCCAC CACGGCTTCGACATCCTATTCGGCTTCCTGATCGGCACCATCTGCGCCATCTACAGTTTCCGCTACTACCACATG CCCATCCGCGAGGGCGCCGGCTGGGCCTGGGGTCCCCGCAGCGGCGACCGCGCCTTCTGGGCCGGCGTTGGTCGC CTGGGCTATGCCGGCCAGCGGTCCGACTTCGACGCCAACGTGAACCGGGCCGACCTCGGCGAGTCGGGCGACGTG GACCTGAACCTCGCGCCGCCGCCCAACCAGCCTATGAGCTCGGGTGGCAGCGTCAATTACCGCGCCGCCGCATAC GGGCCCAGCACCCAGCAGCCCGGTCCGTTCCAGGACGTCGAAATGGAGAGGATGGAGCACCATCGTGCCATGGCC CAGCCAGTGGGCCATCCAGGACATCCGTCGACGAGCCGTGCCTTTTAA |