© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|1123 |
| Gene name | |
| Location | Contig_1237:5231..5880 |
| Strand | + |
| Gene length (bp) | 649 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5278 | 0.5842 | 0.271 | 0.0592 | 0.2506 | 0.0742 | 0.2073 | 0.1828 | 0.1995 | 0.0123 |
| Orthofinder run ID | 4 |
| Orthogroup | 8715 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|1123 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|1123 MATLDSREDQSHAFARPPFVILGRGGDERREPLARGRTNTRPGPLVSRSEPRAGGCWGGLGAGRARTSAAEARRT RRAESKVDMYGTDGTVLCTHGFYYPFILFLPESLAALGGPARSRGREEEEVETRHRRRSQQQQATRARPKLGLPP DQCARGVDLSARLAHRSAGGLETGQAKRLAWDVLPRWLRTNTGGGRLVVD* |
| Coding | >Hirsu2|1123 ATGGCTACCCTGGACAGCAGAGAGGACCAATCGCACGCCTTCGCCCGGCCGCCTTTCGTCATCCTGGGCCGGGGC GGCGACGAACGACGCGAGCCGCTGGCGCGTGGGCGGACGAACACACGCCCTGGGCCTCTGGTCTCCCGCTCGGAA CCCCGTGCCGGCGGCTGCTGGGGCGGCCTCGGCGCAGGCCGGGCCCGGACGAGCGCCGCCGAGGCCCGCCGAACA CGACGGGCCGAGAGCAAGGTTGACATGTACGGTACAGACGGTACAGTATTGTGCACACACGGGTTTTATTATCCG TTCATCCTGTTTCTGCCTGAATCATTAGCAGCTCTTGGCGGCCCCGCCCGTTCTAGGGGGAGGGAGGAGGAAGAA GTGGAGACGAGGCATCGTCGTCGCAGCCAGCAGCAGCAAGCAACACGAGCCCGTCCAAAGCTTGGTCTGCCCCCC GACCAGTGCGCACGCGGCGTCGACTTATCTGCTCGCCTGGCCCATCGGTCTGCCGGCGGTCTGGAGACGGGCCAG GCAAAGAGGCTGGCCTGGGACGTGCTCCCTCGTTGGCTCCGCACCAACACGGGCGGCGGCCGACTTGTCGTCGAC TGA |
| Transcript | >Hirsu2|1123 ATGGCTACCCTGGACAGCAGAGAGGACCAATCGCACGCCTTCGCCCGGCCGCCTTTCGTCATCCTGGGCCGGGGC GGCGACGAACGACGCGAGCCGCTGGCGCGTGGGCGGACGAACACACGCCCTGGGCCTCTGGTCTCCCGCTCGGAA CCCCGTGCCGGCGGCTGCTGGGGCGGCCTCGGCGCAGGCCGGGCCCGGACGAGCGCCGCCGAGGCCCGCCGAACA CGACGGGCCGAGAGCAAGGTTGACATGTACGGTACAGACGGTACAGTATTGTGCACACACGGGTTTTATTATCCG TTCATCCTGTTTCTGCCTGAATCATTAGCAGCTCTTGGCGGCCCCGCCCGTTCTAGGGGGAGGGAGGAGGAAGAA GTGGAGACGAGGCATCGTCGTCGCAGCCAGCAGCAGCAAGCAACACGAGCCCGTCCAAAGCTTGGTCTGCCCCCC GACCAGTGCGCACGCGGCGTCGACTTATCTGCTCGCCTGGCCCATCGGTCTGCCGGCGGTCTGGAGACGGGCCAG GCAAAGAGGCTGGCCTGGGACGTGCTCCCTCGTTGGCTCCGCACCAACACGGGCGGCGGCCGACTTGTCGTCGAC TGA |
| Gene | >Hirsu2|1123 ATGGCTACCCTGGACAGCAGAGAGGACCAATCGCACGCCTTCGCCCGGCCGCCTTTCGTCATCCTGGGCCGGGGC GGCGACGAACGACGCGAGCCGCTGGCGCGTGGGCGGACGAACACACGCCCTGGGCCTCTGGTCTCCCGCTCGGAA CCCCGTGCCGGCGGCTGCTGGGGCGGCCTCGGCGCAGGCCGGGCCCGGACGAGCGCCGCCGAGGCCCGCCGAACA CGACGGGCCGAGAGCAAGGTTGGTTCGAGAAGCTACTAGAGTCCAGTAGTACTAATCTACACAAACAGACATGTA CGGTACAGACGGTACAGTATTGTGCACACACGGGTTTTATTATCCGTTCATCCTGTTTCTGCCTGAATCATTAGC AGCTCTTGGCGGCCCCGCCCGTTCTAGGGGGAGGGAGGAGGAAGAAGTGGAGACGAGGCATCGTCGTCGCAGCCA GCAGCAGCAAGCAACACGAGCCCGTCCAAAGCTTGGTCTGCCCCCCGACCAGTGCGCACGCGGCGTCGACTTATC TGCTCGCCTGGCCCATCGGTCTGCCGGCGGTCTGGAGACGGGCCAGGCAAAGAGGCTGGCCTGGGACGTGCTCCC TCGTTGGCTCCGCACCAACACGGGCGGCGGCCGACTTGTCGTCGACTGA |